Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40270 AT5G40270 AT5G40290 |
| fragaria_vesca | FvH4_4g34540 FvH4_4g34540 FvH4_6g50610 FvH4_6g50610 FvH4_6g50610 |
| malus_domestica | MD09G1034800.v1.1 MD16G1092000.v1.1 |
| prunus_persica | Prupe.1G254300_v2.0.a1 Prupe.1G254300_v2.0.a1 Prupe.1G254300_v2.0.a1 Prupe.3G283700_v2.0.a1 Prupe.3G283700_v2.0.a1 Prupe.3G283700_v2.0.a1 |
| pyrus_communis | pycom111g02770 pycom16g07850 |
| rosa_chinensis | RchiOBHm_Chr2g0171401 RchiOBHm_Chr4g0443921 |
| rosa_laevigata | RLG00000005877 RLG00000022010 |
| rosa_multiflora | Rmu_co8513743.1_g000001 Rmu_sc0007646.1_g000008 Rmu_sc0030144.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00080690 Rroxscaffold_5G00384470 |
| rosa_rugosa | Rorug02G0553800 Rorug02G0553800 Rorug04G0348200 Rorug04G0348200 Rorug04G0348200 |
| rosa_samantha | Rh2AG628200 Rh2BG638600 Rh2CG607300 Rh2DG649600 Rh2DG655700 Rh4AG408800 Rh4BG419900 Rh4CG433900 Rh4DG414900 |
| rosa_wichuraiana | Rw2G052030 Rw4G035110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 986 |
| Acc36I | ACCTGC | 1 cut(s) | 332 |
| AccI | GTMKAC | 1 cut(s) | 87 |
| AccII | CGCG | 1 cut(s) | 1161 |
| AciI | CCGC | 5 cut(s) | 122, 313, 703, 776, 1161 |
| AclWI | GGATC | 3 cut(s) | 113, 884, 897 |
| AcoI | YGGCCR | 3 cut(s) | 58, 361, 598 |
| AcsI | RAATTY | 2 cut(s) | 1220, 1339 |
| AfaI | GTAC | 2 cut(s) | 1032, 1377 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1143 |
| AgsI | TTSAA | 7 cut(s) | 133, 389, 1057, 1114, 1181, 1296, 1337 |
| AjiI | CACGTC | 1 cut(s) | 85 |
| AjnI | CCWGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| AluBI | AGCT | 8 cut(s) | 266, 558, 653, 826, 896, 944, 958, 1309 |
| AluI | AGCT | 8 cut(s) | 266, 558, 653, 826, 896, 944, 958, 1309 |
| Alw26I | GTCTC | 5 cut(s) | 39, 162, 299, 435, 932 |
| AlwI | GGATC | 3 cut(s) | 113, 884, 897 |
| Ama87I | CYCGRG | 1 cut(s) | 771 |
| AoxI | GGCC | 6 cut(s) | 58, 361, 368, 598, 816, 1316 |
| ApeKI | GCWGC | 1 cut(s) | 1255 |
| ApoI | RAATTY | 2 cut(s) | 1220, 1339 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 750, 782 |
| AseI | ATTAAT | 1 cut(s) | 689 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 267 |
| AspLEI | GCGC | 1 cut(s) | 987 |
| AspS9I | GGNCC | 2 cut(s) | 368, 1316 |
| AsuHPI | GGTGA | 3 cut(s) | 272, 739, 859 |
| AsuII | TTCGAA | 1 cut(s) | 682 |
| AvaI | CYCGRG | 1 cut(s) | 771 |
| BalI | TGGCCA | 1 cut(s) | 363 |
| BamHI | GGATCC | 1 cut(s) | 889 |
| BauI | CACGAG | 1 cut(s) | 1407 |
| BbvI | GCAGC | 1 cut(s) | 1242 |
| BceAI | ACGGC | 3 cut(s) | 37, 118, 585 |
| BciT130I | CCWGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| BcoDI | GTCTC | 5 cut(s) | 39, 162, 299, 435, 932 |
| BfaI | CTAG | 1 cut(s) | 969 |
| BfuAI | ACCTGC | 1 cut(s) | 332 |
| BglII | AGATCT | 1 cut(s) | 720 |
| BisI | GCNGC | 1 cut(s) | 1256 |
| BlsI | GCNGC | 1 cut(s) | 1257 |
| Bme1390I | CCNGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| BmeT110I | CYCGRG | 1 cut(s) | 771 |
| BmgBI | CACGTC | 1 cut(s) | 85 |
| BmgT120I | GGNCC | 2 cut(s) | 368, 1316 |
| BmiI | GGNNCC | 2 cut(s) | 421, 891 |
| BmrFI | CCNGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| BmsI | GCATC | 3 cut(s) | 487, 829, 1194 |
| BpmI | CTGGAG | 2 cut(s) | 308, 544 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1305 |
| Bpu14I | TTCGAA | 1 cut(s) | 682 |
| BpuEI | CTTGAG | 1 cut(s) | 1056 |
| BsaAI | YACGTR | 1 cut(s) | 1232 |
| BsaBI | GATNNNNATC | 1 cut(s) | 783 |
| BsaI | GGTCTC | 3 cut(s) | 162, 299, 435 |
| BsaJI | CCNNGG | 7 cut(s) | 100, 206, 364, 404, 561, 843, 1035 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1143 |
| Bse3DI | GCAATG | 1 cut(s) | 1024 |
| Bse8I | GATNNNNATC | 1 cut(s) | 783 |
| BseBI | CCWGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| BseDI | CCNNGG | 7 cut(s) | 100, 206, 364, 404, 561, 843, 1035 |
| BseGI | GGATG | 6 cut(s) | 671, 718, 802, 844, 1129, 1378 |
| BseJI | GATNNNNATC | 1 cut(s) | 783 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1143 |
| BseMI | GCAATG | 1 cut(s) | 1024 |
| BseMII | CTCAG | 6 cut(s) | 138, 210, 489, 1103, 1296, 1317 |
| BseRI | GAGGAG | 3 cut(s) | 164, 1009, 1133 |
| BseXI | GCAGC | 1 cut(s) | 1242 |
| BseYI | CCCAGC | 1 cut(s) | 661 |
| Bsh1236I | CGCG | 1 cut(s) | 1161 |
| BshFI | GGCC | 6 cut(s) | 60, 363, 370, 600, 818, 1318 |
| BsiHKCI | CYCGRG | 1 cut(s) | 771 |
| BsiSI | CCGG | 1 cut(s) | 57 |
| BslFI | GGGAC | 1 cut(s) | 986 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1143 |
| BsmAI | GTCTC | 5 cut(s) | 39, 162, 299, 435, 932 |
| BsmFI | GGGAC | 1 cut(s) | 986 |
| BsmI | GAATGC | 2 cut(s) | 217, 232 |
| BsnI | GGCC | 6 cut(s) | 60, 363, 370, 600, 818, 1318 |
| Bso31I | GGTCTC | 3 cut(s) | 162, 299, 435 |
| BsoBI | CYCGRG | 1 cut(s) | 771 |
| Bsp119I | TTCGAA | 1 cut(s) | 682 |
| Bsp143I | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| Bsp19I | CCATGG | 1 cut(s) | 364 |
| BspACI | CCGC | 5 cut(s) | 122, 313, 703, 776, 1161 |
| BspANI | GGCC | 6 cut(s) | 60, 363, 370, 600, 818, 1318 |
| BspCNI | CTCAG | 6 cut(s) | 139, 209, 490, 1102, 1297, 1318 |
| BspFNI | CGCG | 1 cut(s) | 1161 |
| BspHI | TCATGA | 1 cut(s) | 433 |
| BspLI | GGNNCC | 2 cut(s) | 421, 891 |
| BspMI | ACCTGC | 1 cut(s) | 332 |
| BspPI | GGATC | 3 cut(s) | 113, 884, 897 |
| BspQI | GCTCTTC | 1 cut(s) | 948 |
| BspT104I | TTCGAA | 1 cut(s) | 682 |
| BspTNI | GGTCTC | 3 cut(s) | 162, 299, 435 |
| BsrDI | GCAATG | 1 cut(s) | 1024 |
| BssECI | CCNNGG | 7 cut(s) | 100, 206, 364, 404, 561, 843, 1035 |
| BssMI | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| BssSI | CACGAG | 1 cut(s) | 1407 |
| BssT1I | CCWWGG | 2 cut(s) | 364, 1035 |
| Bst2BI | CACGAG | 1 cut(s) | 1407 |
| Bst2UI | CCWGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| Bst4CI | ACNGT | 5 cut(s) | 47, 331, 731, 751, 793 |
| Bst6I | CTCTTC | 1 cut(s) | 948 |
| BstBAI | YACGTR | 1 cut(s) | 1232 |
| BstBI | TTCGAA | 1 cut(s) | 682 |
| BstC8I | GCNNGC | 1 cut(s) | 255 |
| BstDEI | CTNAG | 7 cut(s) | 147, 164, 196, 498, 1089, 1305, 1326 |
| BstDSI | CCRYGG | 3 cut(s) | 100, 364, 404 |
| BstF5I | GGATG | 6 cut(s) | 671, 718, 802, 844, 1129, 1378 |
| BstFNI | CGCG | 1 cut(s) | 1161 |
| BstHHI | GCGC | 1 cut(s) | 987 |
| BstKTI | GATC | 5 cut(s) | 121, 322, 723, 892, 1240 |
| BstMAI | GTCTC | 5 cut(s) | 39, 162, 299, 435, 932 |
| BstMBI | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 21, 263, 1315 |
| BstNI | CCWGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| BstSCI | CCNGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| BstUI | CGCG | 1 cut(s) | 1161 |
| BstV1I | GCAGC | 1 cut(s) | 1242 |
| BstX2I | RGATCY | 2 cut(s) | 720, 889 |
| BstYI | RGATCY | 2 cut(s) | 720, 889 |
| BsuRI | GGCC | 6 cut(s) | 60, 363, 370, 600, 818, 1318 |
| BtgI | CCRYGG | 3 cut(s) | 100, 364, 404 |
| BtrI | CACGTC | 1 cut(s) | 85 |
| BtsCI | GGATG | 6 cut(s) | 671, 718, 802, 844, 1129, 1378 |
| BtsI | GCAGTG | 1 cut(s) | 1065 |
| BtsIMutI | CAGTG | 1 cut(s) | 1065 |
| BveI | ACCTGC | 1 cut(s) | 332 |
| Cac8I | GCNNGC | 1 cut(s) | 255 |
| CciI | TCATGA | 1 cut(s) | 433 |
| CfoI | GCGC | 1 cut(s) | 987 |
| Cfr13I | GGNCC | 2 cut(s) | 368, 1316 |
| Csp6I | GTAC | 2 cut(s) | 1031, 1376 |
| CviAII | CATG | 3 cut(s) | 353, 365, 434 |
| CviQI | GTAC | 2 cut(s) | 1031, 1376 |
| DdeI | CTNAG | 7 cut(s) | 147, 164, 196, 498, 1089, 1305, 1326 |
| DpnI | GATC | 5 cut(s) | 120, 321, 722, 891, 1239 |
| DpnII | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| EaeI | YGGCCR | 3 cut(s) | 58, 361, 598 |
| Eam1104I | CTCTTC | 1 cut(s) | 948 |
| EarI | CTCTTC | 1 cut(s) | 948 |
| EciI | GGCGGA | 1 cut(s) | 791 |
| Eco130I | CCWWGG | 2 cut(s) | 364, 1035 |
| Eco31I | GGTCTC | 3 cut(s) | 162, 299, 435 |
| Eco88I | CYCGRG | 1 cut(s) | 771 |
| EcoRII | CCWGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| EcoT14I | CCWWGG | 2 cut(s) | 364, 1035 |
| ErhI | CCWWGG | 2 cut(s) | 364, 1035 |
| FaeI | CATG | 3 cut(s) | 356, 368, 437 |
| FaqI | GGGAC | 1 cut(s) | 986 |
| FatI | CATG | 3 cut(s) | 352, 364, 433 |
| FauI | CCCGC | 1 cut(s) | 696 |
| FauNDI | CATATG | 1 cut(s) | 1357 |
| FblI | GTMKAC | 1 cut(s) | 87 |
| Fnu4HI | GCNGC | 1 cut(s) | 1256 |
| FokI | GGATG | 6 cut(s) | 678, 725, 789, 851, 1136, 1365 |
| Fsp4HI | GCNGC | 1 cut(s) | 1256 |
| FspBI | CTAG | 1 cut(s) | 969 |
| FspI | TGCGCA | 1 cut(s) | 986 |
| GlaI | GCGC | 1 cut(s) | 986 |
| GluI | GCNGC | 1 cut(s) | 1256 |
| GsaI | CCCAGC | 1 cut(s) | 665 |
| GsuI | CTGGAG | 2 cut(s) | 308, 544 |
| HaeIII | GGCC | 6 cut(s) | 60, 363, 370, 600, 818, 1318 |
| HapII | CCGG | 1 cut(s) | 57 |
| HhaI | GCGC | 1 cut(s) | 987 |
| Hin1II | CATG | 3 cut(s) | 356, 368, 437 |
| Hin6I | GCGC | 1 cut(s) | 985 |
| HinP1I | GCGC | 1 cut(s) | 985 |
| HinfI | GANTC | 2 cut(s) | 917, 1156 |
| HpaII | CCGG | 1 cut(s) | 57 |
| HphI | GGTGA | 3 cut(s) | 272, 739, 859 |
| Hpy166II | GTNNAC | 4 cut(s) | 88, 100, 619, 754 |
| Hpy188I | TCNGA | 9 cut(s) | 39, 159, 185, 273, 538, 929, 948, 1092, 1327 |
| Hpy188III | TCNNGA | 6 cut(s) | 296, 325, 434, 1073, 1144, 1271 |
| Hpy8I | GTNNAC | 4 cut(s) | 88, 100, 619, 754 |
| Hpy99I | CGWCG | 1 cut(s) | 23 |
| HpyAV | CCTTC | 1 cut(s) | 1187 |
| HpyCH4III | ACNGT | 5 cut(s) | 47, 331, 731, 751, 793 |
| HpyCH4IV | ACGT | 3 cut(s) | 84, 1062, 1231 |
| HpyCH4V | TGCA | 5 cut(s) | 217, 341, 352, 551, 1017 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 21, 263, 1315 |
| HpyF3I | CTNAG | 7 cut(s) | 147, 164, 196, 498, 1089, 1305, 1326 |
| HpySE526I | ACGT | 3 cut(s) | 84, 1062, 1231 |
| Hsp92II | CATG | 3 cut(s) | 356, 368, 437 |
| HspAI | GCGC | 1 cut(s) | 985 |
| Kzo9I | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| LguI | GCTCTTC | 1 cut(s) | 948 |
| LmnI | GCTCC | 3 cut(s) | 563, 949, 1039 |
| Lsp1109I | GCAGC | 1 cut(s) | 1242 |
| LweI | GCATC | 3 cut(s) | 487, 829, 1194 |
| MaeI | CTAG | 1 cut(s) | 969 |
| MaeII | ACGT | 3 cut(s) | 84, 1062, 1231 |
| MaeIII | GTNAC | 7 cut(s) | 187, 377, 641, 766, 1063, 1132, 1247 |
| MalI | GATC | 5 cut(s) | 120, 321, 722, 891, 1239 |
| MboI | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| MboII | GAAGA | 3 cut(s) | 392, 696, 965 |
| MflI | RGATCY | 2 cut(s) | 720, 889 |
| MlsI | TGGCCA | 1 cut(s) | 363 |
| MluCI | AATT | 7 cut(s) | 283, 336, 585, 670, 758, 1220, 1339 |
| MluNI | TGGCCA | 1 cut(s) | 363 |
| MlyI | GAGTC | 2 cut(s) | 911, 1150 |
| Mox20I | TGGCCA | 1 cut(s) | 363 |
| MroXI | GAANNNNTTC | 1 cut(s) | 267 |
| MscI | TGGCCA | 1 cut(s) | 363 |
| MseI | TTAA | 6 cut(s) | 450, 471, 507, 516, 689, 977 |
| Msp20I | TGGCCA | 1 cut(s) | 363 |
| MspA1I | CMGCKG | 1 cut(s) | 896 |
| MspI | CCGG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| Mva1269I | GAATGC | 2 cut(s) | 217, 232 |
| MvaI | CCWGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| MvnI | CGCG | 1 cut(s) | 1161 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 21, 263, 1315 |
| NcoI | CCATGG | 1 cut(s) | 364 |
| NdeI | CATATG | 1 cut(s) | 1357 |
| NdeII | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| NlaIII | CATG | 3 cut(s) | 356, 368, 437 |
| NlaIV | GGNNCC | 2 cut(s) | 421, 891 |
| NmeAIII | GCCGAG | 1 cut(s) | 674 |
| NmuCI | GTSAC | 6 cut(s) | 187, 377, 641, 766, 1063, 1247 |
| NsbI | TGCGCA | 1 cut(s) | 986 |
| NspV | TTCGAA | 1 cut(s) | 682 |
| PagI | TCATGA | 1 cut(s) | 433 |
| PciSI | GCTCTTC | 1 cut(s) | 948 |
| PctI | GAATGC | 2 cut(s) | 217, 232 |
| PdmI | GAANNNNTTC | 1 cut(s) | 267 |
| PflFI | GACNNNGTC | 1 cut(s) | 95 |
| PfoI | TCCNGGA | 1 cut(s) | 1197 |
| PkrI | GCNGC | 1 cut(s) | 1257 |
| PleI | GAGTC | 2 cut(s) | 911, 1150 |
| PpsI | GAGTC | 2 cut(s) | 911, 1150 |
| Ppu21I | YACGTR | 1 cut(s) | 1232 |
| PshBI | ATTAAT | 1 cut(s) | 689 |
| Psp6I | CCWGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| PspFI | CCCAGC | 1 cut(s) | 661 |
| PspGI | CCWGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| PspN4I | GGNNCC | 2 cut(s) | 421, 891 |
| PspPI | GGNCC | 2 cut(s) | 368, 1316 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 781, 813 |
| PsuI | RGATCY | 2 cut(s) | 720, 889 |
| PsyI | GACNNNGTC | 1 cut(s) | 95 |
| PvuII | CAGCTG | 1 cut(s) | 896 |
| RsaI | GTAC | 2 cut(s) | 1032, 1377 |
| RsaNI | GTAC | 2 cut(s) | 1031, 1376 |
| SapI | GCTCTTC | 1 cut(s) | 948 |
| SaqAI | TTAA | 6 cut(s) | 450, 471, 507, 516, 689, 977 |
| SatI | GCNGC | 1 cut(s) | 1256 |
| Sau3AI | GATC | 5 cut(s) | 118, 319, 720, 889, 1237 |
| Sau96I | GGNCC | 2 cut(s) | 368, 1316 |
| SchI | GAGTC | 2 cut(s) | 911, 1150 |
| ScrFI | CCNGG | 6 cut(s) | 207, 223, 562, 845, 1199, 1346 |
| SfaNI | GCATC | 3 cut(s) | 487, 829, 1194 |
| SfuI | TTCGAA | 1 cut(s) | 682 |
| SmlI | CTYRAG | 1 cut(s) | 1071 |
| SmoI | CTYRAG | 1 cut(s) | 1071 |
| Sse9I | AATT | 7 cut(s) | 283, 336, 585, 670, 758, 1220, 1339 |
| SsiI | CCGC | 5 cut(s) | 122, 313, 703, 776, 1161 |
| SspI | AATATT | 1 cut(s) | 902 |
| SspMI | CTAG | 1 cut(s) | 969 |
| StyD4I | CCNGG | 6 cut(s) | 205, 221, 560, 843, 1197, 1344 |
| StyI | CCWWGG | 2 cut(s) | 364, 1035 |
| TaaI | ACNGT | 5 cut(s) | 47, 331, 731, 751, 793 |
| TaiI | ACGT | 3 cut(s) | 87, 1065, 1234 |
| TaqI | TCGA | 4 cut(s) | 117, 297, 682, 787 |
| TasI | AATT | 7 cut(s) | 283, 336, 585, 670, 758, 1220, 1339 |
| TatI | WGTACW | 1 cut(s) | 1375 |
| Tru1I | TTAA | 6 cut(s) | 450, 471, 507, 516, 689, 977 |
| Tru9I | TTAA | 6 cut(s) | 450, 471, 507, 516, 689, 977 |
| TscAI | CASTG | 1 cut(s) | 1072 |
| TseFI | GTSAC | 6 cut(s) | 187, 377, 641, 766, 1063, 1247 |
| TseI | GCWGC | 1 cut(s) | 1255 |
| Tsp45I | GTSAC | 6 cut(s) | 187, 377, 641, 766, 1063, 1247 |
| TspDTI | ATGAA | 2 cut(s) | 597, 966 |
| TspGWI | ACGGA | 2 cut(s) | 59, 629 |
| TspRI | CASTG | 1 cut(s) | 1072 |
| Tth111I | GACNNNGTC | 1 cut(s) | 95 |
| VspI | ATTAAT | 1 cut(s) | 689 |
| XapI | RAATTY | 2 cut(s) | 1220, 1339 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 826, 900, 1042 |
| XmiI | GTMKAC | 1 cut(s) | 87 |
| XmnI | GAANNNNTTC | 1 cut(s) | 267 |
| XspI | CTAG | 1 cut(s) | 969 |