pycom111g02770

Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
1650521 .. 1654712
4192 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g02770.12

Sequence Viewer

Length: 1419 bp
ATGGGGGCGTACAACAACGACCGCGTTTTTTCGCCGATGTGCAGCTTCGCCTCCTCCCAAGACTTCCGTCTCTCGAAGCACGTGCACGACAGTGTCCATGGCAACATTTACCTCGACGCGCTTTCGTTGAAGTTCATCGATACCGAGGAATTTCAGAGGCTTCGGGAGTTGAAACAACTCGGAGTGGCACACATGGTTTATCCAGGGGCTACACATTCCAGGTTTGAGCATTCACTTGGTGTCTATTGGCTTGCCGGTGAAGCTGCTCAGAGGCTTAAAAATTATCAGGGTTTGGAGCTGGATATTGACCGCTTTGATCTCCAGACAGTAAAAATTGCAGGACTTCTGCATGATGTTGGCCATGGGCCTTTCAGTCACTTGTTTGAACGTGAATTTCTTCCCCAGGTTCGGAGTGGTTCCCATTGGTCACATGAAGACATGTCAGTGAAGATGGTTGACCACATTGTTAATCAGCATCATATTGAGATCGACTCTGAGATGGTTAAAAGAGTTAAGGAGATGATACTGGCCAGCTCTGAATTTGCAGTGCCTAAGAGCTCAAGAGAGAAGCCTTTTTTGTATGAAATTGTTGCAAATGGCCGTAATGGAATTGATGTGGACAAGTTTGATTATATTCTTCGTGACTGCCGCAATTGTGGGCTGGGATTGAACTTTGAGTATCAAAGATTAATGGAGACAATGCGGGTTCTGGATGATGAAATATGCTATCGTGCCAAAGATTATCTTACCGTCCACAAGTTATTTGCTACCCGTGCTGATTTGTATCGAACAGTTTATACACATCCGAAAGTAAAGGCCATAGAGCTTATGGTGGTTGATGCCCTAGTGAAAGCAAATGATTTTCTTGACATTGCGTCATGCATTGAGGATCCCTCTCAATACTGGAAGTTAGATGACACCATAATTAGAACTATTGAGACAGCTCCAAACAAAGAACTAAAGGAAGCTAGGGACTTAATCCTACGCATTAGGAGGAGAAATCTTTACCAGTTTTGCAACGAGTATTCTGTACCCAAGGAAAAAATGGAGCATTTCAAAAATGTCACCGCTCAAGATATTGTTTGTTCTCAGAAAAATGGAGGAGTGACATTGAAAGAGGAGGATGTTGCTGTTAGCAACGTCAGGATTGATTTGACTCGTGGGAGACATAATCCTCTTGAAAGTATAAGCTTTTTCCAGGATTACGATAGTCATGAAAAATTCACCATACGCGATGATCGTATTAGTCACTTGCTGCCGACATCATATCAAGATATGATAGTGCGTGTGTACTCCAAAAAGCCTGAGCTGGTCGGAGCAATCTCTGAGGCTTTTGAGAACTTTCAGCTAAAAACATACGGGATCAAGGCACAGATACATGCAACACCAGAGAAAAAGAAGCGTCGTATCTTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

54.78

Weight (kDa)

6.61

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1070
AccII CGCG 3 cut(s) 24, 119, 1233
AciI CCGC 5 cut(s) 22, 310, 649, 703, 1068
AclWI GGATC 3 cut(s) 884, 897, 1370
AcoI YGGCCR 3 cut(s) 358, 528, 598
AcsI RAATTY 4 cut(s) 149, 392, 539, 1220
AcvI CACGTG 1 cut(s) 82
AdeI CACNNNGTG 1 cut(s) 239
AfaI GTAC 3 cut(s) 11, 1032, 1292
AfiI CCNNNNNNNGG 1 cut(s) 408
AflIII ACRYGT 1 cut(s) 438
AgsI TTSAA 7 cut(s) 130, 172, 386, 670, 1057, 1114, 1181
AhdI GACNNNNNGTC 1 cut(s) 874
AjnI CCWGG 4 cut(s) 202, 218, 402, 1197
AleI CACNNNNGTG 1 cut(s) 90
Alw21I GWGCWC 2 cut(s) 87, 560
Alw26I GTCTC 4 cut(s) 74, 689, 932, 1159
Alw44I GTGCAC 1 cut(s) 83
AlwI GGATC 3 cut(s) 884, 897, 1370
AoxI GGCC 5 cut(s) 358, 365, 528, 598, 816
ApaLI GTGCAC 1 cut(s) 83
ApeKI GCWGC 3 cut(s) 42, 263, 1255
ApoI RAATTY 4 cut(s) 149, 392, 539, 1220
AseI ATTAAT 1 cut(s) 689
Asp700I GAANNNNTTC 1 cut(s) 396
AspLEI GCGC 1 cut(s) 121
AspS9I GGNCC 1 cut(s) 365
AsuHPI GGTGA 3 cut(s) 269, 1057, 1216
BaeGI GKGCMC 1 cut(s) 87
BalI TGGCCA 2 cut(s) 360, 530
BamHI GGATCC 1 cut(s) 889
BanII GRGCYC 1 cut(s) 560
BauI CACGAG 1 cut(s) 1158
BbrPI CACGTG 1 cut(s) 82
BbsI GAAGAC 1 cut(s) 441
Bbv12I GWGCWC 2 cut(s) 87, 560
BbvI GCAGC 3 cut(s) 54, 250, 1242
BccI CCATC 2 cut(s) 445, 493
BceAI ACGGC 1 cut(s) 585
BcgI CGANNNNNNTGC 2 cut(s) 64, 98
BciT130I CCWGG 4 cut(s) 204, 220, 404, 1199
BcoDI GTCTC 4 cut(s) 74, 689, 932, 1159
BfaI CTAG 2 cut(s) 845, 969
BisI GCNGC 4 cut(s) 43, 264, 649, 1256
BlsI GCNGC 4 cut(s) 44, 265, 650, 1257
Bme1390I CCNGG 4 cut(s) 204, 220, 404, 1199
BmeRI GACNNNNNGTC 1 cut(s) 874
BmgT120I GGNCC 1 cut(s) 365
BmiI GGNNCC 2 cut(s) 418, 891
BmrFI CCNGG 4 cut(s) 204, 220, 404, 1199
BmsI GCATC 2 cut(s) 484, 829
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 441
BplI GAGNNNNNCTC 4 cut(s) 476, 508, 878, 910
BpmI CTGGAG 1 cut(s) 305
Bpu10I CCTNAGC 1 cut(s) 1305
BpuEI CTTGAG 2 cut(s) 544, 1056
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 82
BsaBI GATNNNNATC 1 cut(s) 783
BsaJI CCNNGG 6 cut(s) 97, 144, 203, 361, 402, 1035
Bsc4I CCNNNNNNNGG 1 cut(s) 408
Bse118I RCCGGY 1 cut(s) 254
Bse1I ACTGG 3 cut(s) 531, 908, 1009
Bse3DI GCAATG 1 cut(s) 870
Bse8I GATNNNNATC 1 cut(s) 783
BseBI CCWGG 4 cut(s) 204, 220, 404, 1199
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 6 cut(s) 97, 144, 203, 361, 402, 1035
BseGI GGATG 3 cut(s) 718, 802, 1129
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 1 cut(s) 408
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 5 cut(s) 281, 486, 1103, 1296, 1317
BseNI ACTGG 3 cut(s) 531, 908, 1009
BseRI GAGGAG 4 cut(s) 43, 1009, 1116, 1133
BseSI GKGCMC 1 cut(s) 87
BseXI GCAGC 3 cut(s) 54, 250, 1242
BseYI CCCAGC 1 cut(s) 661
BsgI GTGCAG 1 cut(s) 61
Bsh1236I CGCG 3 cut(s) 24, 119, 1233
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 5 cut(s) 360, 367, 530, 600, 818
BshVI ATCGAT 1 cut(s) 138
BsiEI CGRYCG 1 cut(s) 22
BsiHKAI GWGCWC 2 cut(s) 87, 560
BsiSI CCGG 1 cut(s) 255
BslFI GGGAC 1 cut(s) 986
BslI CCNNNNNNNGG 1 cut(s) 408
BsmAI GTCTC 4 cut(s) 74, 689, 932, 1159
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 986
BsmI GAATGC 1 cut(s) 229
BsnI GGCC 5 cut(s) 360, 367, 530, 600, 818
Bsp1286I GDGCHC 2 cut(s) 87, 560
Bsp143I GATC 5 cut(s) 316, 486, 889, 1237, 1362
Bsp19I CCATGG 2 cut(s) 97, 361
BspACI CCGC 5 cut(s) 22, 310, 649, 703, 1068
BspANI GGCC 5 cut(s) 360, 367, 530, 600, 818
BspCNI CTCAG 5 cut(s) 280, 487, 1102, 1297, 1318
BspDI ATCGAT 1 cut(s) 138
BspFNI CGCG 3 cut(s) 24, 119, 1233
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 2 cut(s) 418, 891
BspPI GGATC 3 cut(s) 884, 897, 1370
BsrBI CCGCTC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 870
BsrFI RCCGGY 1 cut(s) 254
BsrI ACTGG 3 cut(s) 531, 908, 1009
BssAI RCCGGY 1 cut(s) 254
BssECI CCNNGG 6 cut(s) 97, 144, 203, 361, 402, 1035
BssMI GATC 5 cut(s) 316, 486, 889, 1237, 1362
BssSI CACGAG 1 cut(s) 1158
BssT1I CCWWGG 3 cut(s) 97, 361, 1035
Bst2BI CACGAG 1 cut(s) 1158
Bst2UI CCWGG 4 cut(s) 204, 220, 404, 1199
Bst4CI ACNGT 4 cut(s) 92, 328, 751, 793
BstBAI YACGTR 1 cut(s) 82
BstC8I GCNNGC 2 cut(s) 252, 532
BstDEI CTNAG 7 cut(s) 267, 495, 552, 1089, 1305, 1326, 1411
BstDSI CCRYGG 2 cut(s) 97, 361
BstF5I GGATG 3 cut(s) 718, 802, 1129
BstFNI CGCG 3 cut(s) 24, 119, 1233
BstHHI GCGC 1 cut(s) 121
BstKTI GATC 5 cut(s) 319, 489, 892, 1240, 1365
BstMAI GTCTC 4 cut(s) 74, 689, 932, 1159
BstMBI GATC 5 cut(s) 316, 486, 889, 1237, 1362
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 2 cut(s) 260, 773
BstNI CCWGG 4 cut(s) 204, 220, 404, 1199
BstNSI RCATGY 2 cut(s) 442, 1382
BstPAI GACNNNNGTC 1 cut(s) 66
BstSCI CCNGG 4 cut(s) 202, 218, 402, 1197
BstSLI GKGCMC 1 cut(s) 87
BstUI CGCG 3 cut(s) 24, 119, 1233
BstV1I GCAGC 3 cut(s) 54, 250, 1242
BstV2I GAAGAC 1 cut(s) 441
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 5 cut(s) 360, 367, 530, 600, 818
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 2 cut(s) 97, 361
BtgZI GCGATG 1 cut(s) 1248
BtsCI GGATG 3 cut(s) 718, 802, 1129
BtsI GCAGTG 1 cut(s) 552
BtsIMutI CAGTG 3 cut(s) 97, 450, 552
Cac8I GCNNGC 2 cut(s) 252, 532
CciI TCATGA 1 cut(s) 1213
CfoI GCGC 1 cut(s) 121
Cfr10I RCCGGY 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 365
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 3 cut(s) 125, 864, 1391
Csp6I GTAC 3 cut(s) 10, 1031, 1291
CviQI GTAC 3 cut(s) 10, 1031, 1291
DdeI CTNAG 7 cut(s) 267, 495, 552, 1089, 1305, 1326, 1411
DpnI GATC 5 cut(s) 318, 488, 891, 1239, 1364
DpnII GATC 5 cut(s) 316, 486, 889, 1237, 1362
DraIII CACNNNGTG 1 cut(s) 239
DriI GACNNNNNGTC 1 cut(s) 874
EaeI YGGCCR 3 cut(s) 358, 528, 598
Eam1105I GACNNNNNGTC 1 cut(s) 874
Ecl136II GAGCTC 1 cut(s) 558
Eco130I CCWWGG 3 cut(s) 97, 361, 1035
Eco24I GRGCYC 1 cut(s) 560
Eco53kI GAGCTC 1 cut(s) 558
Eco72I CACGTG 1 cut(s) 82
EcoICRI GAGCTC 1 cut(s) 558
EcoRII CCWGG 4 cut(s) 202, 218, 402, 1197
EcoT14I CCWWGG 3 cut(s) 97, 361, 1035
EcoT22I ATGCAT 1 cut(s) 884
EcoT38I GRGCYC 1 cut(s) 560
ErhI CCWWGG 3 cut(s) 97, 361, 1035
Esp3I CGTCTC 1 cut(s) 74
FalI AAGNNNNNCTT 2 cut(s) 729, 761
FaqI GGGAC 1 cut(s) 986
FauI CCCGC 1 cut(s) 696
Fnu4HI GCNGC 4 cut(s) 43, 264, 649, 1256
FokI GGATG 3 cut(s) 725, 789, 1136
FriOI GRGCYC 1 cut(s) 560
Fsp4HI GCNGC 4 cut(s) 43, 264, 649, 1256
FspBI CTAG 2 cut(s) 845, 969
GlaI GCGC 1 cut(s) 120
GluI GCNGC 4 cut(s) 43, 264, 649, 1256
GsaI CCCAGC 1 cut(s) 665
GsuI CTGGAG 1 cut(s) 305
HaeIII GGCC 5 cut(s) 360, 367, 530, 600, 818
HapII CCGG 1 cut(s) 255
HgaI GACGC 3 cut(s) 125, 864, 1391
HhaI GCGC 1 cut(s) 121
Hin6I GCGC 1 cut(s) 119
HinP1I GCGC 1 cut(s) 119
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HindIII AAGCTT 1 cut(s) 1189
HinfI GANTC 2 cut(s) 491, 1156
HpaII CCGG 1 cut(s) 255
HphI GGTGA 3 cut(s) 269, 1057, 1216
Hpy166II GTNNAC 5 cut(s) 85, 457, 619, 754, 1291
Hpy8I GTNNAC 5 cut(s) 85, 457, 619, 754, 1291
Hpy99I CGWCG 2 cut(s) 119, 1407
HpyCH4III ACNGT 4 cut(s) 92, 328, 751, 793
HpyCH4IV ACGT 3 cut(s) 81, 388, 1140
HpyCH4V TGCA 9 cut(s) 42, 85, 338, 349, 545, 593, 882, 1017, 1382
HpyF10VI GCNNNNNNNGC 2 cut(s) 260, 773
HpyF3I CTNAG 7 cut(s) 267, 495, 552, 1089, 1305, 1326, 1411
HpySE526I ACGT 3 cut(s) 81, 388, 1140
HspAI GCGC 1 cut(s) 119
Kzo9I GATC 5 cut(s) 316, 486, 889, 1237, 1362
LmnI GCTCC 4 cut(s) 295, 949, 1048, 1316
Lsp1109I GCAGC 3 cut(s) 54, 250, 1242
LweI GCATC 2 cut(s) 484, 829
MaeI CTAG 2 cut(s) 845, 969
MaeII ACGT 3 cut(s) 81, 388, 1140
MaeIII GTNAC 6 cut(s) 374, 426, 641, 1063, 1105, 1247
MalI GATC 5 cut(s) 318, 488, 891, 1239, 1364
MbiI CCGCTC 1 cut(s) 1070
MboI GATC 5 cut(s) 316, 486, 889, 1237, 1362
MboII GAAGA 4 cut(s) 389, 446, 460, 629
MfeI CAATTG 1 cut(s) 652
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 2 cut(s) 87, 560
MlsI TGGCCA 2 cut(s) 360, 530
MluNI TGGCCA 2 cut(s) 360, 530
MlyI GAGTC 2 cut(s) 485, 1150
MmeI TCCRAC 1 cut(s) 1294
Mox20I TGGCCA 2 cut(s) 360, 530
Mph1103I ATGCAT 1 cut(s) 884
MroXI GAANNNNTTC 1 cut(s) 396
MscI TGGCCA 2 cut(s) 360, 530
MseI TTAA 6 cut(s) 276, 468, 504, 513, 689, 977
MslI CAYNNNNRTG 2 cut(s) 90, 443
Msp20I TGGCCA 2 cut(s) 360, 530
MspI CCGG 1 cut(s) 255
MspR9I CCNGG 4 cut(s) 204, 220, 404, 1199
MunI CAATTG 1 cut(s) 652
Mva1269I GAATGC 1 cut(s) 229
MvaI CCWGG 4 cut(s) 204, 220, 404, 1199
MvnI CGCG 3 cut(s) 24, 119, 1233
MwoI GCNNNNNNNGC 2 cut(s) 260, 773
NcoI CCATGG 2 cut(s) 97, 361
NdeII GATC 5 cut(s) 316, 486, 889, 1237, 1362
NlaIV GGNNCC 2 cut(s) 418, 891
NmuCI GTSAC 6 cut(s) 374, 426, 641, 1063, 1105, 1247
NsiI ATGCAT 1 cut(s) 884
NspI RCATGY 2 cut(s) 442, 1382
OliI CACNNNNGTG 1 cut(s) 90
PagI TCATGA 1 cut(s) 1213
PciI ACATGT 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 1237
PctI GAATGC 1 cut(s) 229
PdmI GAANNNNTTC 1 cut(s) 396
PflFI GACNNNGTC 1 cut(s) 92
PfoI TCCNGGA 1 cut(s) 1197
PkrI GCNGC 4 cut(s) 44, 265, 650, 1257
PleI GAGTC 2 cut(s) 485, 1150
PmaCI CACGTG 1 cut(s) 82
PmlI CACGTG 1 cut(s) 82
PpsI GAGTC 2 cut(s) 485, 1150
Ppu21I YACGTR 1 cut(s) 82
PscI ACATGT 1 cut(s) 438
PshAI GACNNNNGTC 1 cut(s) 66
PshBI ATTAAT 1 cut(s) 689
Psp124BI GAGCTC 1 cut(s) 560
Psp6I CCWGG 4 cut(s) 202, 218, 402, 1197
PspCI CACGTG 1 cut(s) 82
PspFI CCCAGC 1 cut(s) 661
PspGI CCWGG 4 cut(s) 202, 218, 402, 1197
PspN4I GGNNCC 2 cut(s) 418, 891
PspPI GGNCC 1 cut(s) 365
PsrI GAACNNNNNNTAC 2 cut(s) 781, 813
PsuI RGATCY 1 cut(s) 889
PsyI GACNNNGTC 1 cut(s) 92
RsaI GTAC 3 cut(s) 11, 1032, 1292
RsaNI GTAC 3 cut(s) 10, 1031, 1291
RseI CAYNNNNRTG 2 cut(s) 90, 443
SacI GAGCTC 1 cut(s) 560
SaqAI TTAA 6 cut(s) 276, 468, 504, 513, 689, 977
SatI GCNGC 4 cut(s) 43, 264, 649, 1256
Sau3AI GATC 5 cut(s) 316, 486, 889, 1237, 1362
Sau96I GGNCC 1 cut(s) 365
SchI GAGTC 2 cut(s) 485, 1150
ScrFI CCNGG 4 cut(s) 204, 220, 404, 1199
SduI GDGCHC 2 cut(s) 87, 560
SfaNI GCATC 2 cut(s) 484, 829
SmiMI CAYNNNNRTG 2 cut(s) 90, 443
SmlI CTYRAG 2 cut(s) 559, 1071
SmoI CTYRAG 2 cut(s) 559, 1071
SsiI CCGC 5 cut(s) 22, 310, 649, 703, 1068
SspMI CTAG 2 cut(s) 845, 969
SstI GAGCTC 1 cut(s) 560
StyD4I CCNGG 4 cut(s) 202, 218, 402, 1197
StyI CCWWGG 3 cut(s) 97, 361, 1035
TaaI ACNGT 4 cut(s) 92, 328, 751, 793
TaiI ACGT 3 cut(s) 84, 391, 1143
TaqI TCGA 5 cut(s) 74, 114, 138, 489, 787
TatI WGTACW 1 cut(s) 1290
TauI GCSGC 1 cut(s) 651
Tru1I TTAA 6 cut(s) 276, 468, 504, 513, 689, 977
Tru9I TTAA 6 cut(s) 276, 468, 504, 513, 689, 977
TscAI CASTG 3 cut(s) 97, 450, 552
TseFI GTSAC 6 cut(s) 374, 426, 641, 1063, 1105, 1247
TseI GCWGC 3 cut(s) 42, 263, 1255
Tsp45I GTSAC 6 cut(s) 374, 426, 641, 1063, 1105, 1247
TspDTI ATGAA 5 cut(s) 124, 447, 597, 732, 1230
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 3 cut(s) 97, 450, 552
Tth111I GACNNNGTC 1 cut(s) 92
VneI GTGCAC 1 cut(s) 83
VspI ATTAAT 1 cut(s) 689
XapI RAATTY 4 cut(s) 149, 392, 539, 1220
XceI RCATGY 2 cut(s) 442, 1382
XcmI CCANNNNNNNNNTGG 3 cut(s) 410, 826, 1042
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 2 cut(s) 845, 969
Zsp2I ATGCAT 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.