Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002150

Physical Location & Seq

Genomic Coordinates Forward (+)

5271649 .. 5273271

Gene Structure 1623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G103100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGGGGTGGCCTATTGTGGGTGAAACTCTGGAGTTTCTGTTTGGGAAGCCAGAAATCTTTGTGTCCAAGAGGATGAGGAGGTACTCCCCTGAAATCTTCAAGACCAAGATTCTTGGAGAGAAAACTGCTGTTATTTGTGGTCCTAATGGACACAAATTTCTGTTTTCCAATGAGCAGAAGTACTTCACAGCTTTTCGACCACATTCCATGCAAAAGATGTTTCGTTCGTATAAGGCTCCTGCAGCAGCAGCTGCTGCTGCTGCTCCTCCAGCAGTAACACAACCTGCTCGTGACGAAGAAGCCAAAGTGTTGAGGTCACCGGGGTTTTTGAAGCCCGAAGCATTGGTAAGGTACTTGGGTGTAATGGACTCTATCACCCAAGCACAGATGAAGGCCTATTGGGAAGGCAAAGATGAGGTGGAGGTGTACCCTCTGACCAAGACCCTCACTCTAGGCCTTGCCTGCAGATTCTTCTTGGGCATAGATGAGCCAGACAGAATTGCAAGGTTTGTGAGCAATTTCGATGATGTGACTGTTGGGATGCATTCACTTATTCTGAATTTCCCAGGAACAACATTCTACAAAGCAACCAAAGCAGCCGATGAACTTCGAAGGGAGTTGAAGATTGTGATTCAGGAGAAGAAGGCTGCAATGGCATCAGGAGCTCCCATGCATGACATATTGTCACATATGATTGTGGCAAGTGATCCAACTGGCAAACACATGCCTGAGGCTGAGGTTGCTGATAAGATCATGGGTTTGCTGACAGCAGGATACAGCACTGTGGCTACTGCCATGACTTTCTTCATGAAATATGTTGGAGAGAGGCCAGACATTTATGCCAAAGTCCTAGCAGAACACAAGGAGATAGCAGACTCAAAGAAGCCTGGACAATTTTTGGAGTGGGATGACATCAACAAAATGAAGTACTCATGGAATGTATTGTATGAGGTATATTGGACTGTTAGTACAACAAACATGAACCCAGAGTACTTTCCCAACCCAGAAAAGTTTGACCCTTCACGATATGATGACTTGAGTGCATTCCCAGCTTTCACATTTGTTCCATTTGGAGGAGGACCAAGAATGTGCCCTGGGAAAGAATATGCAAGGCTAGCAATACTCACTTTTGTTCACAATGTGGTGATGAGGTTCAAATGGGAAGTGCTATTTCCTAACGAAAAGATCACAGGTGACATGATGCCGACACCAGAGAAAGGACTTCCGGTTCGCCTTACACGTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

416

Amino Acids

46.98

Weight (kDa)

8.79

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002150)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11580 FvH4_3g11580
malus_domestica	MD05G1262500.v1.1 MD05G1262600.v1.1 MD05G1262700.v1.1 MD10G1240500.v1.1 MD10G1240600.v1.1
prunus_persica	Prupe.4G103000_v2.0.a1 Prupe.4G103100_v2.0.a1 Prupe.4G103200_v2.0.a1 Prupe.4G103300_v2.0.a1 Prupe.4G103300_v2.0.a1
pyrus_communis	pycom05g24610 pycom05g24620 pycom05g24630 pycom05g24640 pycom10g20120
rosa_chinensis	RchiOBHm_Chr5g0018501 RchiOBHm_Chr5g0018521 RchiOBHm_Chr5g0018551 RchiOBHm_Chr5g0026691
rosa_laevigata	RLG00000032373 RLG00000032375 RLG00000032378 RLG00000032947
rosa_multiflora	Rmu_co8475133.1_g000001 Rmu_sc0002301.1_g000003 Rmu_sc0002579.1_g000003 Rmu_sc0007192.1_g000016
rosa_roxburghii	Rroxscaffold_1G00052770 Rroxscaffold_1G00059200 Rroxscaffold_1G00059220
rosa_rugosa	Rorug05G0045000 Rorug05G0045100 Rorug05G0094800
rosa_samantha	Rh5AG136000 Rh5AG136100 Rh5AG188500 Rh5AG188600 Rh5BG135100 Rh5BG184800
rosa_wichuraiana	Rw5G012050 Rw5G012060 Rw5G017060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	292
AclWI	GGATC	1 cut(s)	701
AcsI	RAATTY	2 cut(s)	155, 559
AdeI	CACNNNGTG	1 cut(s)	1141
AfaI	GTAC	7 cut(s)	83, 182, 353, 428, 929, 970, 992
AfiI	CCNNNNNNNGG	3 cut(s)	17, 1073, 1217
AflIII	ACRYGT	1 cut(s)	1238
AgsI	TTSAA	4 cut(s)	100, 331, 622, 1156
AhdI	GACNNNNNGTC	1 cut(s)	682
AjiI	CACGTC	1 cut(s)	1241
AjnI	CCWGG	3 cut(s)	565, 886, 1093
AloI	GAACNNNNNNTCC	2 cut(s)	1212, 1244
AluBI	AGCT	4 cut(s)	191, 251, 665, 1052
AluI	AGCT	4 cut(s)	191, 251, 665, 1052
Alw21I	GWGCWC	1 cut(s)	667
AlwI	GGATC	1 cut(s)	701
AlwNI	CAGNNNCTG	2 cut(s)	251, 254
AoxI	GGCC	4 cut(s)	8, 393, 454, 827
ApeKI	GCWGC	9 cut(s)	242, 245, 248, 251, 254, 257, 260, 596, 647
ApoI	RAATTY	2 cut(s)	155, 559
ArsI	GACNNNNNNTTYG	2 cut(s)	1212, 1244
Asp700I	GAANNNNTTC	1 cut(s)	182
AspS9I	GGNCC	2 cut(s)	140, 1079
AsuC2I	CCSGG	1 cut(s)	321
AsuHPI	GGTGA	5 cut(s)	32, 309, 367, 1156, 1205
AsuII	TTCGAA	1 cut(s)	610
AsuNHI	GCTAGC	1 cut(s)	1114
AvaII	GGWCC	2 cut(s)	140, 1079
AxyI	CCTNAGG	1 cut(s)	729
BaeGI	GKGCMC	1 cut(s)	1094
BaeI	ACNNNNGTAYC	2 cut(s)	343, 376
BanII	GRGCYC	1 cut(s)	667
BauI	CACGAG	1 cut(s)	288
Bbv12I	GWGCWC	1 cut(s)	667
BbvCI	CCTCAGC	1 cut(s)	735
BbvI	GCAGC	9 cut(s)	238, 241, 244, 247, 254, 257, 260, 608, 634
BciT130I	CCWGG	3 cut(s)	567, 888, 1095
BciVI	GTATCC	1 cut(s)	767
BcnI	CCSGG	1 cut(s)	321
BfaI	CTAG	4 cut(s)	452, 851, 1115, 1246
BfmI	CTRYAG	2 cut(s)	240, 463
BfuAI	ACCTGC	1 cut(s)	292
BfuI	GTATCC	1 cut(s)	767
BisI	GCNGC	9 cut(s)	243, 246, 249, 252, 255, 258, 261, 597, 648
BlsI	GCNGC	9 cut(s)	244, 247, 250, 253, 256, 259, 262, 598, 649
BmcAI	AGTACT	3 cut(s)	182, 929, 992
Bme1390I	CCNGG	4 cut(s)	321, 567, 888, 1095
Bme18I	GGWCC	2 cut(s)	140, 1079
BmeRI	GACNNNNNGTC	1 cut(s)	682
BmgBI	CACGTC	1 cut(s)	1241
BmgT120I	GGNCC	2 cut(s)	140, 1079
BmiI	GGNNCC	1 cut(s)	237
BmrFI	CCNGG	4 cut(s)	321, 567, 888, 1095
BmsI	GCATC	3 cut(s)	531, 665, 1191
BmtI	GCTAGC	1 cut(s)	1118
BpmI	CTGGAG	2 cut(s)	50, 252
Bpu10I	CCTNAGC	1 cut(s)	735
Bpu14I	TTCGAA	1 cut(s)	610
BpuEI	CTTGAG	1 cut(s)	1057
BpuMI	CCSGG	1 cut(s)	321
BsaJI	CCNNGG	4 cut(s)	320, 565, 1093, 1094
BsaWI	WCCGGW	1 cut(s)	1225
BsaXI	ACNNNNNCTCC	2 cut(s)	23, 53
Bsc4I	CCNNNNNNNGG	3 cut(s)	17, 1073, 1217
Bse1I	ACTGG	1 cut(s)	718
Bse21I	CCTNAGG	1 cut(s)	729
Bse3DI	GCAATG	1 cut(s)	657
BseBI	CCWGG	3 cut(s)	567, 888, 1095
BseDI	CCNNGG	4 cut(s)	320, 565, 1093, 1094
BseGI	GGATG	3 cut(s)	78, 546, 913
BseLI	CCNNNNNNNGG	3 cut(s)	17, 1073, 1217
BseMI	GCAATG	1 cut(s)	657
BseMII	CTCAG	2 cut(s)	720, 726
BseNI	ACTGG	1 cut(s)	718
BseRI	GAGGAG	3 cut(s)	91, 255, 1089
BseSI	GKGCMC	1 cut(s)	1094
BseXI	GCAGC	9 cut(s)	238, 241, 244, 247, 254, 257, 260, 608, 634
BseYI	CCCAGC	1 cut(s)	1048
BshFI	GGCC	4 cut(s)	10, 395, 456, 829
BsiHKAI	GWGCWC	1 cut(s)	667
BsiSI	CCGG	2 cut(s)	320, 1226
BslI	CCNNNNNNNGG	3 cut(s)	17, 1073, 1217
BsmI	GAATGC	2 cut(s)	544, 1043
BsnI	GGCC	4 cut(s)	10, 395, 456, 829
Bsp119I	TTCGAA	1 cut(s)	610
Bsp1286I	GDGCHC	2 cut(s)	667, 1094
Bsp143I	GATC	3 cut(s)	706, 750, 1185
BspANI	GGCC	4 cut(s)	10, 395, 456, 829
BspCNI	CTCAG	2 cut(s)	721, 727
BspHI	TCATGA	1 cut(s)	807
BspLI	GGNNCC	1 cut(s)	237
BspMAI	CTGCAG	2 cut(s)	244, 467
BspMI	ACCTGC	1 cut(s)	292
BspOI	GCTAGC	1 cut(s)	1118
BspPI	GGATC	1 cut(s)	701
BspT104I	TTCGAA	1 cut(s)	610
BsrDI	GCAATG	1 cut(s)	657
BsrI	ACTGG	1 cut(s)	718
BssECI	CCNNGG	4 cut(s)	320, 565, 1093, 1094
BssMI	GATC	3 cut(s)	706, 750, 1185
BssSI	CACGAG	1 cut(s)	288
Bst2BI	CACGAG	1 cut(s)	288
Bst2UI	CCWGG	3 cut(s)	567, 888, 1095
Bst4CI	ACNGT	3 cut(s)	535, 784, 964
BstAPI	GCANNNNNTGC	2 cut(s)	251, 254
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	2 cut(s)	463, 1116
BstDEI	CTNAG	2 cut(s)	729, 735
BstEII	GGTNACC	1 cut(s)	315
BstF5I	GGATG	3 cut(s)	78, 546, 913
BstKTI	GATC	3 cut(s)	709, 753, 1188
BstMBI	GATC	3 cut(s)	706, 750, 1185
BstNI	CCWGG	3 cut(s)	567, 888, 1095
BstNSI	RCATGY	1 cut(s)	727
BstPI	GGTNACC	1 cut(s)	315
BstSCI	CCNGG	4 cut(s)	319, 565, 886, 1093
BstSFI	CTRYAG	2 cut(s)	240, 463
BstSLI	GKGCMC	1 cut(s)	1094
BstV1I	GCAGC	9 cut(s)	238, 241, 244, 247, 254, 257, 260, 608, 634
Bsu36I	CCTNAGG	1 cut(s)	729
BsuI	GTATCC	1 cut(s)	767
BsuRI	GGCC	4 cut(s)	10, 395, 456, 829
BtrI	CACGTC	1 cut(s)	1241
BtsCI	GGATG	3 cut(s)	78, 546, 913
BtsIMutI	CAGTG	1 cut(s)	780
BveI	ACCTGC	1 cut(s)	292
Cac8I	GCNNGC	2 cut(s)	463, 1116
CaiI	CAGNNNCTG	2 cut(s)	251, 254
CciI	TCATGA	1 cut(s)	807
Cfr13I	GGNCC	2 cut(s)	140, 1079
Csp6I	GTAC	7 cut(s)	82, 181, 352, 427, 928, 969, 991
CviQI	GTAC	7 cut(s)	82, 181, 352, 427, 928, 969, 991
DdeI	CTNAG	2 cut(s)	729, 735
DpnI	GATC	3 cut(s)	708, 752, 1187
DpnII	GATC	3 cut(s)	706, 750, 1185
DraIII	CACNNNGTG	1 cut(s)	1141
DriI	GACNNNNNGTC	1 cut(s)	682
Eam1105I	GACNNNNNGTC	1 cut(s)	682
Ecl136II	GAGCTC	1 cut(s)	665
Eco147I	AGGCCT	2 cut(s)	395, 456
Eco24I	GRGCYC	1 cut(s)	667
Eco47I	GGWCC	2 cut(s)	140, 1079
Eco53kI	GAGCTC	1 cut(s)	665
Eco81I	CCTNAGG	1 cut(s)	729
Eco91I	GGTNACC	1 cut(s)	315
EcoICRI	GAGCTC	1 cut(s)	665
EcoO65I	GGTNACC	1 cut(s)	315
EcoRII	CCWGG	3 cut(s)	565, 886, 1093
EcoT22I	ATGCAT	2 cut(s)	546, 675
EcoT38I	GRGCYC	1 cut(s)	667
FauNDI	CATATG	1 cut(s)	690
Fnu4HI	GCNGC	9 cut(s)	243, 246, 249, 252, 255, 258, 261, 597, 648
FokI	GGATG	3 cut(s)	85, 553, 920
FriOI	GRGCYC	1 cut(s)	667
Fsp4HI	GCNGC	9 cut(s)	243, 246, 249, 252, 255, 258, 261, 597, 648
FspBI	CTAG	4 cut(s)	452, 851, 1115, 1246
GluI	GCNGC	9 cut(s)	243, 246, 249, 252, 255, 258, 261, 597, 648
GsaI	CCCAGC	1 cut(s)	1052
GsuI	CTGGAG	2 cut(s)	50, 252
HaeIII	GGCC	4 cut(s)	10, 395, 456, 829
HapII	CCGG	2 cut(s)	320, 1226
HinfI	GANTC	5 cut(s)	109, 368, 468, 631, 875
HpaII	CCGG	2 cut(s)	320, 1226
HphI	GGTGA	5 cut(s)	32, 309, 367, 1156, 1205
Hpy166II	GTNNAC	2 cut(s)	427, 1135
Hpy188I	TCNGA	2 cut(s)	435, 558
Hpy188III	TCNNGA	7 cut(s)	29, 100, 290, 635, 660, 808, 1023
Hpy8I	GTNNAC	2 cut(s)	427, 1135
HpyAV	CCTTC	5 cut(s)	385, 398, 606, 637, 1029
HpyCH4III	ACNGT	3 cut(s)	535, 784, 964
HpyCH4IV	ACGT	1 cut(s)	1240
HpyCH4V	TGCA	9 cut(s)	211, 242, 465, 503, 544, 650, 673, 1043, 1109
HpyF3I	CTNAG	2 cut(s)	729, 735
HpySE526I	ACGT	1 cut(s)	1240
Kzo9I	GATC	3 cut(s)	706, 750, 1185
LmnI	GCTCC	4 cut(s)	241, 268, 662, 670
Lsp1109I	GCAGC	9 cut(s)	238, 241, 244, 247, 254, 257, 260, 608, 634
LweI	GCATC	3 cut(s)	531, 665, 1191
MaeI	CTAG	4 cut(s)	452, 851, 1115, 1246
MaeII	ACGT	1 cut(s)	1240
MaeIII	GTNAC	7 cut(s)	274, 290, 315, 529, 684, 1193, 1241
MalI	GATC	3 cut(s)	708, 752, 1187
MboI	GATC	3 cut(s)	706, 750, 1185
MboII	GAAGA	6 cut(s)	88, 308, 463, 634, 652, 796
MhlI	GDGCHC	2 cut(s)	667, 1094
MluCI	AATT	5 cut(s)	155, 498, 517, 559, 893
MlyI	GAGTC	2 cut(s)	362, 869
MmeI	TCCRAC	2 cut(s)	734, 799
Mph1103I	ATGCAT	2 cut(s)	546, 675
MroXI	GAANNNNTTC	1 cut(s)	182
MspA1I	CMGCKG	1 cut(s)	251
MspI	CCGG	2 cut(s)	320, 1226
MspR9I	CCNGG	4 cut(s)	321, 567, 888, 1095
Mva1269I	GAATGC	2 cut(s)	544, 1043
MvaI	CCWGG	3 cut(s)	567, 888, 1095
NciI	CCSGG	1 cut(s)	321
NdeI	CATATG	1 cut(s)	690
NdeII	GATC	3 cut(s)	706, 750, 1185
NheI	GCTAGC	1 cut(s)	1114
NlaIV	GGNNCC	1 cut(s)	237
NmuCI	GTSAC	6 cut(s)	290, 315, 529, 684, 1193, 1241
NsiI	ATGCAT	2 cut(s)	546, 675
NspI	RCATGY	1 cut(s)	727
NspV	TTCGAA	1 cut(s)	610
PagI	TCATGA	1 cut(s)	807
PasI	CCCWGGG	1 cut(s)	1094
PceI	AGGCCT	2 cut(s)	395, 456
PcsI	WCGNNNNNNNCGW	1 cut(s)	1237
PctI	GAATGC	2 cut(s)	544, 1043
PdmI	GAANNNNTTC	1 cut(s)	182
PfeI	GAWTC	3 cut(s)	109, 468, 631
PkrI	GCNGC	9 cut(s)	244, 247, 250, 253, 256, 259, 262, 598, 649
PleI	GAGTC	2 cut(s)	362, 869
PpsI	GAGTC	2 cut(s)	362, 869
Psp124BI	GAGCTC	1 cut(s)	667
Psp6I	CCWGG	3 cut(s)	565, 886, 1093
PspEI	GGTNACC	1 cut(s)	315
PspFI	CCCAGC	1 cut(s)	1048
PspGI	CCWGG	3 cut(s)	565, 886, 1093
PspN4I	GGNNCC	1 cut(s)	237
PspPI	GGNCC	2 cut(s)	140, 1079
PsrI	GAACNNNNNNTAC	2 cut(s)	974, 1006
PstI	CTGCAG	2 cut(s)	244, 467
PstNI	CAGNNNCTG	2 cut(s)	251, 254
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	7 cut(s)	83, 182, 353, 428, 929, 970, 992
RsaNI	GTAC	7 cut(s)	82, 181, 352, 427, 928, 969, 991
SacI	GAGCTC	1 cut(s)	667
SatI	GCNGC	9 cut(s)	243, 246, 249, 252, 255, 258, 261, 597, 648
Sau3AI	GATC	3 cut(s)	706, 750, 1185
Sau96I	GGNCC	2 cut(s)	140, 1079
ScaI	AGTACT	3 cut(s)	182, 929, 992
SchI	GAGTC	2 cut(s)	362, 869
ScrFI	CCNGG	4 cut(s)	321, 567, 888, 1095
SduI	GDGCHC	2 cut(s)	667, 1094
SfaNI	GCATC	3 cut(s)	531, 665, 1191
SfcI	CTRYAG	2 cut(s)	240, 463
SfuI	TTCGAA	1 cut(s)	610
SinI	GGWCC	2 cut(s)	140, 1079
SmlI	CTYRAG	1 cut(s)	1036
SmoI	CTYRAG	1 cut(s)	1036
Sse9I	AATT	5 cut(s)	155, 498, 517, 559, 893
SseBI	AGGCCT	2 cut(s)	395, 456
SspMI	CTAG	4 cut(s)	452, 851, 1115, 1246
SstI	GAGCTC	1 cut(s)	667
StuI	AGGCCT	2 cut(s)	395, 456
StyD4I	CCNGG	4 cut(s)	319, 565, 886, 1093
TaaI	ACNGT	3 cut(s)	535, 784, 964
TaiI	ACGT	1 cut(s)	1243
TaqI	TCGA	3 cut(s)	196, 522, 610
TasI	AATT	5 cut(s)	155, 498, 517, 559, 893
TatI	WGTACW	4 cut(s)	180, 927, 968, 990
TfiI	GAWTC	3 cut(s)	109, 468, 631
TscAI	CASTG	1 cut(s)	787
TseFI	GTSAC	6 cut(s)	290, 315, 529, 684, 1193, 1241
TseI	GCWGC	9 cut(s)	242, 245, 248, 251, 254, 257, 260, 596, 647
Tsp45I	GTSAC	6 cut(s)	290, 315, 529, 684, 1193, 1241
TspDTI	ATGAA	6 cut(s)	404, 618, 796, 824, 938, 995
TspRI	CASTG	1 cut(s)	787
VpaK11BI	GGWCC	2 cut(s)	140, 1079
XapI	RAATTY	2 cut(s)	155, 559
XceI	RCATGY	1 cut(s)	727
XmnI	GAANNNNTTC	1 cut(s)	182
XspI	CTAG	4 cut(s)	452, 851, 1115, 1246
ZrmI	AGTACT	3 cut(s)	182, 929, 992
Zsp2I	ATGCAT	2 cut(s)	546, 675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.