Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002150

Physical Location & Seq

Genomic Coordinates Reverse (-)

5274505 .. 5276425

Gene Structure 1921 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G103200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGAGACCCTTTACCTTGCTTTGTCTTTGGGTGCTGCTTTTTTAGCGTTTATCATCTTTGCATTCAAAGGCAAATCAGATGATGGCAAGAACCTGCCACCAGGGAGCATGGGGTGGCCTATTGTGGGTGAAACTCTGGAGTTTCTGTTTGGGAAGCCAGAAATCTTTGTGTCCAAGAGGATGAGGAGGTACTCCCCTGAAATCTTCAAGACCAAGATTCTTGGAGAGAAAACTGCCGTTATTTGTGGTCCTAATGGACACAAATTTCTGTTTTCTAATGAGCAGAAGTACTTCACAGCTTTTCGACCACATTCCATGCAAAAGATGTTTCGTTCGTATAAGGCTCCTGCAGCAGCAGCTGCTGCTGCTGCTCTTCCAGCAGTAGCACAACCTGCTCGTGACGAAGAAGCCAAAGTGTTGAGGTCACCGGGGTTTTTGAAGCCCGAAGCATTGGTAAGGTACTTGGGGGTAATGGACTCGATCACCCAAGCACAGATGAAGGCCTATTGGGAAGGCAAAGATGAGGTGGAGGTGTACCCTCTGACCAAGACCCTCACTCTAGGCCTTGCCTGCAGATTCTTCTTGGGCATAGATGAGCCAGACAGAATTGCAAGGTTTGTGAGCAATTTCGATGATGTGACTGTTGGGATGCATTCACTTATTCTGAATTTCCCAGGAACAACATTCTACAAAGCAACCAAAGCAGCCGATGAACTTCGAAGGGAGTTGAAGATTGTGATTCAGGAGAAGAAGGCTGCAATGGCATCAGGAGCTCCCATGCATGACATATTGTCACATATGATTGTGGCAAGTGATCCAACTGGCAAACACATGGCTGAGGCTGAGATTGCTGATAAGATCATGGGTTTGCTGACAGCAGGATACAGCACTGTGGCTACTGCCATGACTTTCTTCATGAAATATGTTGGAGAGAGGCCAGACATTTATGCCAAAGTCCTAGCTGAACACAAGGAGATTGCAGACTCAAAGAAGCCTGGACAATTTTTGGAGTGGGATGACATCAACAAGATGAAGTACTCATGGAATGTATTGTATGAAGTGATGAGATTCACACCACCACTTCAGGGGACATTCCGAGAAGCCTTGACTGACTTCACCTATGCTGGTTACACCATCCCAAAGGGCTGGAAGGTATATTGGACTGTTAGTACAACAAACATGAACCCAGAGTACTTTCCCAACCCAGAAAAGTTTGACCCCTCAAGATATGATGACTTGAATGCATTCCCAGCTTTCACATTTGTTCCATTTGGAGGAGGACCAAGAATGTGCCCTGGCAAAGAGTATGCAAGGCTAGCCATACTCACTTTTGTTCACAATGTGGTGATGAGGTTCAAATGGGAAGTGCTATTTCCTAACGAAAAGATTACAGGTGACATGATGCCAACACCGGAGAAAGGACTTCCGGTTCGTCTTCATCGTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

483

Amino Acids

54.38

Weight (kDa)

8.94

Isoelectric Point (pI)

35.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002150)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11580 FvH4_3g11580
malus_domestica	MD05G1262500.v1.1 MD05G1262600.v1.1 MD05G1262700.v1.1 MD10G1240500.v1.1 MD10G1240600.v1.1
prunus_persica	Prupe.4G103000_v2.0.a1 Prupe.4G103100_v2.0.a1 Prupe.4G103200_v2.0.a1 Prupe.4G103300_v2.0.a1 Prupe.4G103300_v2.0.a1
pyrus_communis	pycom05g24610 pycom05g24620 pycom05g24630 pycom05g24640 pycom10g20120
rosa_chinensis	RchiOBHm_Chr5g0018501 RchiOBHm_Chr5g0018521 RchiOBHm_Chr5g0018551 RchiOBHm_Chr5g0026691
rosa_laevigata	RLG00000032373 RLG00000032375 RLG00000032378 RLG00000032947
rosa_multiflora	Rmu_co8475133.1_g000001 Rmu_sc0002301.1_g000003 Rmu_sc0002579.1_g000003 Rmu_sc0007192.1_g000016
rosa_roxburghii	Rroxscaffold_1G00052770 Rroxscaffold_1G00059200 Rroxscaffold_1G00059220
rosa_rugosa	Rorug05G0045000 Rorug05G0045100 Rorug05G0094800
rosa_samantha	Rh5AG136000 Rh5AG136100 Rh5AG188500 Rh5AG188600 Rh5BG135100 Rh5BG184800
rosa_wichuraiana	Rw5G012050 Rw5G012060 Rw5G017060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	102, 400
AclWI	GGATC	1 cut(s)	809
AcsI	RAATTY	2 cut(s)	263, 667
AcuI	CTGAAG	1 cut(s)	1067
AdeI	CACNNNGTG	1 cut(s)	1342
AfaI	GTAC	7 cut(s)	191, 290, 461, 536, 1037, 1171, 1193
AfiI	CCNNNNNNNGG	4 cut(s)	125, 1085, 1274, 1418
AgsI	TTSAA	6 cut(s)	67, 208, 439, 730, 1240, 1357
AhdI	GACNNNNNGTC	1 cut(s)	790
AjnI	CCWGG	4 cut(s)	100, 673, 994, 1294
AloI	GAACNNNNNNTCC	2 cut(s)	1413, 1445
AluBI	AGCT	5 cut(s)	299, 359, 773, 962, 1253
AluI	AGCT	5 cut(s)	299, 359, 773, 962, 1253
Alw21I	GWGCWC	1 cut(s)	775
AlwI	GGATC	1 cut(s)	809
AlwNI	CAGNNNCTG	2 cut(s)	359, 362
AoxI	GGCC	4 cut(s)	116, 501, 562, 935
ApoI	RAATTY	2 cut(s)	263, 667
ArsI	GACNNNNNNTTYG	2 cut(s)	1413, 1445
Asp700I	GAANNNNTTC	2 cut(s)	290, 1244
AspS9I	GGNCC	2 cut(s)	248, 1280
AsuC2I	CCSGG	1 cut(s)	429
AsuHPI	GGTGA	6 cut(s)	140, 417, 475, 1108, 1357, 1406
AsuII	TTCGAA	1 cut(s)	718
AsuNHI	GCTAGC	1 cut(s)	1315
AvaII	GGWCC	2 cut(s)	248, 1280
BaeGI	GKGCMC	1 cut(s)	1295
BanII	GRGCYC	1 cut(s)	775
BauI	CACGAG	1 cut(s)	396
BbsI	GAAGAC	1 cut(s)	1427
Bbv12I	GWGCWC	1 cut(s)	775
BbvCI	CCTCAGC	1 cut(s)	837
BccI	CCATC	2 cut(s)	77, 1142
BceAI	ACGGC	1 cut(s)	221
BciT130I	CCWGG	4 cut(s)	102, 675, 996, 1296
BciVI	GTATCC	1 cut(s)	875
BcnI	CCSGG	1 cut(s)	429
BfaI	CTAG	4 cut(s)	560, 959, 1316, 1447
BfmI	CTRYAG	2 cut(s)	348, 571
BfuAI	ACCTGC	2 cut(s)	102, 400
BfuI	GTATCC	1 cut(s)	875
BmcAI	AGTACT	3 cut(s)	290, 1037, 1193
Bme1390I	CCNGG	5 cut(s)	102, 429, 675, 996, 1296
Bme18I	GGWCC	2 cut(s)	248, 1280
BmeRI	GACNNNNNGTC	1 cut(s)	790
BmgT120I	GGNCC	2 cut(s)	248, 1280
BmiI	GGNNCC	1 cut(s)	345
BmrFI	CCNGG	5 cut(s)	102, 429, 675, 996, 1296
BmsI	GCATC	3 cut(s)	639, 773, 1392
BmtI	GCTAGC	1 cut(s)	1319
BpiI	GAAGAC	1 cut(s)	1427
BpmI	CTGGAG	1 cut(s)	158
Bpu10I	CCTNAGC	1 cut(s)	837
Bpu14I	TTCGAA	1 cut(s)	718
BpuEI	CTTGAG	1 cut(s)	1207
BpuMI	CCSGG	1 cut(s)	429
BsaJI	CCNNGG	4 cut(s)	101, 428, 673, 1294
BsaWI	WCCGGW	2 cut(s)	1411, 1426
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	4 cut(s)	125, 1085, 1274, 1418
Bse1I	ACTGG	1 cut(s)	826
Bse3DI	GCAATG	1 cut(s)	765
BseBI	CCWGG	4 cut(s)	102, 675, 996, 1296
BseDI	CCNNGG	4 cut(s)	101, 428, 673, 1294
BseGI	GGATG	4 cut(s)	186, 654, 1021, 1134
BseLI	CCNNNNNNNGG	4 cut(s)	125, 1085, 1274, 1418
BseMI	GCAATG	1 cut(s)	765
BseMII	CTCAG	2 cut(s)	828, 834
BseNI	ACTGG	1 cut(s)	826
BseRI	GAGGAG	2 cut(s)	199, 1290
BseSI	GKGCMC	1 cut(s)	1295
BseYI	CCCAGC	1 cut(s)	1249
BshFI	GGCC	4 cut(s)	118, 503, 564, 937
BsiHKAI	GWGCWC	1 cut(s)	775
BsiSI	CCGG	3 cut(s)	428, 1412, 1427
BslFI	GGGAC	1 cut(s)	1102
BslI	CCNNNNNNNGG	4 cut(s)	125, 1085, 1274, 1418
BsmFI	GGGAC	1 cut(s)	1102
BsmI	GAATGC	4 cut(s)	62, 652, 1244, 1246
BsnI	GGCC	4 cut(s)	118, 503, 564, 937
Bsp119I	TTCGAA	1 cut(s)	718
Bsp1286I	GDGCHC	2 cut(s)	775, 1295
Bsp143I	GATC	3 cut(s)	480, 814, 858
BspANI	GGCC	4 cut(s)	118, 503, 564, 937
BspCNI	CTCAG	2 cut(s)	829, 835
BspHI	TCATGA	1 cut(s)	915
BspLI	GGNNCC	1 cut(s)	345
BspMAI	CTGCAG	2 cut(s)	352, 575
BspMI	ACCTGC	2 cut(s)	102, 400
BspOI	GCTAGC	1 cut(s)	1319
BspPI	GGATC	1 cut(s)	809
BspQI	GCTCTTC	1 cut(s)	378
BspT104I	TTCGAA	1 cut(s)	718
BsrDI	GCAATG	1 cut(s)	765
BsrI	ACTGG	1 cut(s)	826
BssECI	CCNNGG	4 cut(s)	101, 428, 673, 1294
BssMI	GATC	3 cut(s)	480, 814, 858
BssSI	CACGAG	1 cut(s)	396
Bst2BI	CACGAG	1 cut(s)	396
Bst2UI	CCWGG	4 cut(s)	102, 675, 996, 1296
Bst4CI	ACNGT	3 cut(s)	643, 892, 1165
Bst6I	CTCTTC	1 cut(s)	378
BstAPI	GCANNNNNTGC	3 cut(s)	359, 362, 392
BstBI	TTCGAA	1 cut(s)	718
BstC8I	GCNNGC	2 cut(s)	571, 1317
BstDEI	CTNAG	2 cut(s)	837, 843
BstEII	GGTNACC	1 cut(s)	423
BstF5I	GGATG	4 cut(s)	186, 654, 1021, 1134
BstKTI	GATC	3 cut(s)	483, 817, 861
BstMBI	GATC	3 cut(s)	480, 814, 858
BstNI	CCWGG	4 cut(s)	102, 675, 996, 1296
BstPI	GGTNACC	1 cut(s)	423
BstSCI	CCNGG	5 cut(s)	100, 427, 673, 994, 1294
BstSFI	CTRYAG	2 cut(s)	348, 571
BstSLI	GKGCMC	1 cut(s)	1295
BstV2I	GAAGAC	1 cut(s)	1427
BstXI	CCANNNNNNTGG	1 cut(s)	1146
BsuI	GTATCC	1 cut(s)	875
BsuRI	GGCC	4 cut(s)	118, 503, 564, 937
BtsCI	GGATG	4 cut(s)	186, 654, 1021, 1134
BtsIMutI	CAGTG	1 cut(s)	888
BveI	ACCTGC	2 cut(s)	102, 400
Cac8I	GCNNGC	2 cut(s)	571, 1317
CaiI	CAGNNNCTG	2 cut(s)	359, 362
CciI	TCATGA	1 cut(s)	915
Cfr13I	GGNCC	2 cut(s)	248, 1280
Csp6I	GTAC	7 cut(s)	190, 289, 460, 535, 1036, 1170, 1192
CviQI	GTAC	7 cut(s)	190, 289, 460, 535, 1036, 1170, 1192
DdeI	CTNAG	2 cut(s)	837, 843
DpnI	GATC	3 cut(s)	482, 816, 860
DpnII	GATC	3 cut(s)	480, 814, 858
DraIII	CACNNNGTG	1 cut(s)	1342
DriI	GACNNNNNGTC	1 cut(s)	790
Eam1104I	CTCTTC	1 cut(s)	378
Eam1105I	GACNNNNNGTC	1 cut(s)	790
EarI	CTCTTC	1 cut(s)	378
Ecl136II	GAGCTC	1 cut(s)	773
Eco147I	AGGCCT	2 cut(s)	503, 564
Eco24I	GRGCYC	1 cut(s)	775
Eco47I	GGWCC	2 cut(s)	248, 1280
Eco53kI	GAGCTC	1 cut(s)	773
Eco57I	CTGAAG	1 cut(s)	1067
Eco91I	GGTNACC	1 cut(s)	423
EcoICRI	GAGCTC	1 cut(s)	773
EcoO65I	GGTNACC	1 cut(s)	423
EcoRII	CCWGG	4 cut(s)	100, 673, 994, 1294
EcoT22I	ATGCAT	3 cut(s)	654, 783, 1246
EcoT38I	GRGCYC	1 cut(s)	775
FaqI	GGGAC	1 cut(s)	1102
FauNDI	CATATG	1 cut(s)	798
FokI	GGATG	4 cut(s)	193, 661, 1028, 1121
FriOI	GRGCYC	1 cut(s)	775
FspBI	CTAG	4 cut(s)	560, 959, 1316, 1447
GsaI	CCCAGC	1 cut(s)	1253
GsuI	CTGGAG	1 cut(s)	158
HaeIII	GGCC	4 cut(s)	118, 503, 564, 937
HapII	CCGG	3 cut(s)	428, 1412, 1427
HinfI	GANTC	6 cut(s)	217, 476, 576, 739, 983, 1068
HpaII	CCGG	3 cut(s)	428, 1412, 1427
HphI	GGTGA	6 cut(s)	140, 417, 475, 1108, 1357, 1406
Hpy166II	GTNNAC	2 cut(s)	535, 1336
Hpy188I	TCNGA	4 cut(s)	79, 543, 666, 1097
Hpy188III	TCNNGA	7 cut(s)	137, 208, 398, 743, 768, 916, 1224
Hpy8I	GTNNAC	2 cut(s)	535, 1336
HpyAV	CCTTC	5 cut(s)	493, 506, 714, 745, 1144
HpyCH4III	ACNGT	3 cut(s)	643, 892, 1165
HpyF3I	CTNAG	2 cut(s)	837, 843
Kzo9I	GATC	3 cut(s)	480, 814, 858
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	4 cut(s)	105, 349, 770, 778
LweI	GCATC	3 cut(s)	639, 773, 1392
MaeI	CTAG	4 cut(s)	560, 959, 1316, 1447
MaeIII	GTNAC	7 cut(s)	398, 423, 637, 792, 1127, 1394, 1442
MalI	GATC	3 cut(s)	482, 816, 860
MboI	GATC	3 cut(s)	480, 814, 858
MboII	GAAGA	8 cut(s)	196, 365, 416, 571, 742, 760, 904, 1427
MhlI	GDGCHC	2 cut(s)	775, 1295
MluCI	AATT	5 cut(s)	263, 606, 625, 667, 1001
MlyI	GAGTC	2 cut(s)	470, 977
MmeI	TCCRAC	2 cut(s)	842, 907
Mph1103I	ATGCAT	3 cut(s)	654, 783, 1246
MroXI	GAANNNNTTC	2 cut(s)	290, 1244
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	3 cut(s)	428, 1412, 1427
MspR9I	CCNGG	5 cut(s)	102, 429, 675, 996, 1296
Mva1269I	GAATGC	4 cut(s)	62, 652, 1244, 1246
MvaI	CCWGG	4 cut(s)	102, 675, 996, 1296
NciI	CCSGG	1 cut(s)	429
NdeI	CATATG	1 cut(s)	798
NdeII	GATC	3 cut(s)	480, 814, 858
NheI	GCTAGC	1 cut(s)	1315
NlaIV	GGNNCC	1 cut(s)	345
NmuCI	GTSAC	6 cut(s)	398, 423, 637, 792, 1394, 1442
NsiI	ATGCAT	3 cut(s)	654, 783, 1246
NspV	TTCGAA	1 cut(s)	718
PagI	TCATGA	1 cut(s)	915
PceI	AGGCCT	2 cut(s)	503, 564
PciSI	GCTCTTC	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	1438
PctI	GAATGC	4 cut(s)	62, 652, 1244, 1246
PdmI	GAANNNNTTC	2 cut(s)	290, 1244
PfeI	GAWTC	4 cut(s)	217, 576, 739, 1068
PleI	GAGTC	2 cut(s)	470, 977
PpsI	GAGTC	2 cut(s)	470, 977
Psp124BI	GAGCTC	1 cut(s)	775
Psp6I	CCWGG	4 cut(s)	100, 673, 994, 1294
PspEI	GGTNACC	1 cut(s)	423
PspFI	CCCAGC	1 cut(s)	1249
PspGI	CCWGG	4 cut(s)	100, 673, 994, 1294
PspN4I	GGNNCC	1 cut(s)	345
PspPI	GGNCC	2 cut(s)	248, 1280
PsrI	GAACNNNNNNTAC	2 cut(s)	1175, 1207
PstI	CTGCAG	2 cut(s)	352, 575
PstNI	CAGNNNCTG	2 cut(s)	359, 362
PvuII	CAGCTG	1 cut(s)	359
RsaI	GTAC	7 cut(s)	191, 290, 461, 536, 1037, 1171, 1193
RsaNI	GTAC	7 cut(s)	190, 289, 460, 535, 1036, 1170, 1192
SacI	GAGCTC	1 cut(s)	775
SapI	GCTCTTC	1 cut(s)	378
Sau3AI	GATC	3 cut(s)	480, 814, 858
Sau96I	GGNCC	2 cut(s)	248, 1280
ScaI	AGTACT	3 cut(s)	290, 1037, 1193
SchI	GAGTC	2 cut(s)	470, 977
ScrFI	CCNGG	5 cut(s)	102, 429, 675, 996, 1296
SduI	GDGCHC	2 cut(s)	775, 1295
SfaNI	GCATC	3 cut(s)	639, 773, 1392
SfcI	CTRYAG	2 cut(s)	348, 571
SfuI	TTCGAA	1 cut(s)	718
SinI	GGWCC	2 cut(s)	248, 1280
SmlI	CTYRAG	1 cut(s)	1222
SmoI	CTYRAG	1 cut(s)	1222
Sse9I	AATT	5 cut(s)	263, 606, 625, 667, 1001
SseBI	AGGCCT	2 cut(s)	503, 564
SspMI	CTAG	4 cut(s)	560, 959, 1316, 1447
SstI	GAGCTC	1 cut(s)	775
StuI	AGGCCT	2 cut(s)	503, 564
StyD4I	CCNGG	5 cut(s)	100, 427, 673, 994, 1294
TaaI	ACNGT	3 cut(s)	643, 892, 1165
TaqI	TCGA	4 cut(s)	304, 479, 630, 718
TasI	AATT	5 cut(s)	263, 606, 625, 667, 1001
TatI	WGTACW	4 cut(s)	288, 1035, 1169, 1191
TfiI	GAWTC	4 cut(s)	217, 576, 739, 1068
TscAI	CASTG	1 cut(s)	895
TseFI	GTSAC	6 cut(s)	398, 423, 637, 792, 1394, 1442
Tsp45I	GTSAC	6 cut(s)	398, 423, 637, 792, 1394, 1442
TspDTI	ATGAA	8 cut(s)	512, 726, 904, 932, 1046, 1071, 1196, 1427
TspRI	CASTG	1 cut(s)	895
VpaK11BI	GGWCC	2 cut(s)	248, 1280
XapI	RAATTY	2 cut(s)	263, 667
XmnI	GAANNNNTTC	2 cut(s)	290, 1244
XspI	CTAG	4 cut(s)	560, 959, 1316, 1447
ZrmI	AGTACT	3 cut(s)	290, 1037, 1193
Zsp2I	ATGCAT	3 cut(s)	654, 783, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.