Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0009858

Physical Location & Seq

Genomic Coordinates Reverse (-)

8355986 .. 8361057

Gene Structure 5072 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G145500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 753 bp

ATGAGAATGAAGTTTCAAAAATCAAAAGAGCTAAATGTTTACCAATGTTTATTTATATGTGGGATGAACAATTTTAAAGAGGTTTTGGTGGCATTGGAGATGGTGAAGAAGAAGGAGAAGAATGAGAAAAAAAGCAAGAGATGGGCAGCTTTTTTGGGTGCTGTGGTGGTGGTGTTGTTAGCCACAGCACTCACCTCTACAAGAACTGCCTCTAAACTCAACCTCTCTCTCTTTTTCAAGAACCCCAATTCCTGCCACTGTCCTCAGGATTCAAAAGGGTACACAGGCATTGTGGAGGATTGCTGTTGTGATTATGAAACAGTGGACAGTGTTAATGCAGAAGTGTTGCACCCTCTTCTACAAGAGATTGTTAAAACTCTATTTTTCATATATTTCAAGGCCAAGCTCTGGTGTGACTGTCCCTTTTGGACCGAAGACGGTATGTGCCTCTTGCGTGACTGCAGCATCTGTGAATGCCCAGAAAATGAATTTCCAGAATCTTTTATGAGGCCCTTGCTCCAGGGCCTTGCACCTGACAGTTTTGTGTGTCAAGAAGGAAAGCAGCAGGGGACTGTTGACTGGACGCTAGACAGTAGAGCTTTCAGAGGCTGGGTTGAGACAGATAATCCTTGGACAAATGATGATGAGACGGATAATGGTGAGATGACATATGTGAACCTTCTATTGAACCCTGAACGTTACTGGCTATGCTGGTCCATCACCGAGAAGGATATGGGATGCTGTGTATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015035 GO:0015036 GO:0016020 GO:0016491 GO:0016667 GO:0016853 GO:0016860 GO:0016864 GO:0019538 GO:0031984 GO:0034975 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04141 ko05110 map04141 map05110

Pfam Domains

Protein Families

ERO1

Protein Analysis

251

Amino Acids

28.82

Weight (kDa)

4.98

Isoelectric Point (pI)

31.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009858)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72280
prunus_persica	Prupe.4G145500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0027131 RchiOBHm_Chr5g0027151 RchiOBHm_Chr5g0027161 RchiOBHm_Chr5g0027251
rosa_laevigata	RLG00000032999 RLG00000033001
rosa_multiflora	Rmu_sc0000882.1_g000035 Rmu_sc0006065.1_g000015
rosa_rugosa	Rorug05G0097800 Rorug05G0124600
rosa_samantha	Rh5AG191300 Rh5AG191800 Rh5BG189000 Rh5BG189500 Rh5CG210100 Rh5DG190800 Rh5DG191600
rosa_wichuraiana	Rw5G017440 Rw5G017480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	408
AclI	AACGTT	1 cut(s)	697
AcsI	RAATTY	1 cut(s)	488
AfaI	GTAC	1 cut(s)	281
AfiI	CCNNNNNNNGG	1 cut(s)	408
AgsI	TTSAA	5 cut(s)	17, 238, 273, 397, 688
AjnI	CCWGG	1 cut(s)	519
AloI	GAACNNNNNNTCC	2 cut(s)	233, 265
AluBI	AGCT	4 cut(s)	31, 149, 406, 599
AluI	AGCT	4 cut(s)	31, 149, 406, 599
Alw26I	GTCTC	2 cut(s)	611, 641
AlwNI	CAGNNNCTG	2 cut(s)	468, 609
AoxI	GGCC	3 cut(s)	399, 509, 523
ApeKI	GCWGC	3 cut(s)	146, 462, 562
ApoI	RAATTY	1 cut(s)	488
AspS9I	GGNCC	4 cut(s)	429, 510, 523, 714
AsuHPI	GGTGA	4 cut(s)	115, 184, 671, 712
AvaII	GGWCC	2 cut(s)	429, 714
AxyI	CCTNAGG	1 cut(s)	264
BbsI	GAAGAC	1 cut(s)	441
BbvI	GCAGC	3 cut(s)	158, 474, 574
BccI	CCATC	3 cut(s)	94, 135, 725
BciT130I	CCWGG	1 cut(s)	521
BcoDI	GTCTC	2 cut(s)	611, 641
BfaI	CTAG	1 cut(s)	587
BfmI	CTRYAG	1 cut(s)	460
BisI	GCNGC	3 cut(s)	147, 463, 563
BlsI	GCNGC	3 cut(s)	148, 464, 564
Bme1390I	CCNGG	1 cut(s)	521
Bme18I	GGWCC	2 cut(s)	429, 714
BmgT120I	GGNCC	4 cut(s)	429, 510, 523, 714
BmrFI	CCNGG	1 cut(s)	521
BmsI	GCATC	2 cut(s)	474, 728
BpiI	GAAGAC	1 cut(s)	441
BpmI	CTGGAG	1 cut(s)	503
BsaJI	CCNNGG	2 cut(s)	520, 629
Bsc4I	CCNNNNNNNGG	1 cut(s)	408
Bse1I	ACTGG	2 cut(s)	584, 707
Bse21I	CCTNAGG	1 cut(s)	264
BseBI	CCWGG	1 cut(s)	521
BseDI	CCNNGG	2 cut(s)	520, 629
BseGI	GGATG	2 cut(s)	69, 743
BseLI	CCNNNNNNNGG	1 cut(s)	408
BseMII	CTCAG	1 cut(s)	278
BseNI	ACTGG	2 cut(s)	584, 707
BseXI	GCAGC	3 cut(s)	158, 474, 574
BseYI	CCCAGC	1 cut(s)	609
BshFI	GGCC	3 cut(s)	401, 511, 525
BslFI	GGGAC	2 cut(s)	405, 583
BslI	CCNNNNNNNGG	1 cut(s)	408
BsmAI	GTCTC	2 cut(s)	611, 641
BsmBI	CGTCTC	1 cut(s)	641
BsmFI	GGGAC	2 cut(s)	405, 583
BsmI	GAATGC	1 cut(s)	479
BsnI	GGCC	3 cut(s)	401, 511, 525
BspANI	GGCC	3 cut(s)	401, 511, 525
BspCNI	CTCAG	1 cut(s)	277
BspMAI	CTGCAG	1 cut(s)	464
BsrI	ACTGG	2 cut(s)	584, 707
BssECI	CCNNGG	2 cut(s)	520, 629
BssT1I	CCWWGG	1 cut(s)	629
Bst2UI	CCWGG	1 cut(s)	521
Bst4CI	ACNGT	8 cut(s)	260, 322, 329, 419, 440, 539, 574, 593
Bst6I	CTCTTC	1 cut(s)	360
BstDEI	CTNAG	1 cut(s)	264
BstF5I	GGATG	2 cut(s)	69, 743
BstMAI	GTCTC	2 cut(s)	611, 641
BstNI	CCWGG	1 cut(s)	521
BstSCI	CCNGG	1 cut(s)	519
BstSFI	CTRYAG	1 cut(s)	460
BstV1I	GCAGC	3 cut(s)	158, 474, 574
BstV2I	GAAGAC	1 cut(s)	441
Bsu36I	CCTNAGG	1 cut(s)	264
BsuRI	GGCC	3 cut(s)	401, 511, 525
BtsCI	GGATG	2 cut(s)	69, 743
BtsIMutI	CAGTG	3 cut(s)	256, 327, 334
CaiI	CAGNNNCTG	2 cut(s)	468, 609
Cfr13I	GGNCC	4 cut(s)	429, 510, 523, 714
CseI	GACGC	1 cut(s)	592
Csp6I	GTAC	1 cut(s)	280
CviQI	GTAC	1 cut(s)	280
DdeI	CTNAG	1 cut(s)	264
DraI	TTTAAA	1 cut(s)	76
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
Eco130I	CCWWGG	1 cut(s)	629
Eco47I	GGWCC	2 cut(s)	429, 714
Eco81I	CCTNAGG	1 cut(s)	264
EcoO109I	RGGNCCY	2 cut(s)	510, 523
EcoRII	CCWGG	1 cut(s)	519
EcoT14I	CCWWGG	1 cut(s)	629
ErhI	CCWWGG	1 cut(s)	629
Esp3I	CGTCTC	1 cut(s)	641
FaqI	GGGAC	2 cut(s)	405, 583
FauNDI	CATATG	1 cut(s)	670
Fnu4HI	GCNGC	3 cut(s)	147, 463, 563
FokI	GGATG	1 cut(s)	76
Fsp4HI	GCNGC	3 cut(s)	147, 463, 563
FspBI	CTAG	1 cut(s)	587
GluI	GCNGC	3 cut(s)	147, 463, 563
GsaI	CCCAGC	1 cut(s)	613
GsuI	CTGGAG	1 cut(s)	503
HaeIII	GGCC	3 cut(s)	401, 511, 525
HgaI	GACGC	1 cut(s)	592
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HinfI	GANTC	2 cut(s)	269, 497
HphI	GGTGA	4 cut(s)	115, 184, 671, 712
Hpy166II	GTNNAC	5 cut(s)	40, 282, 325, 577, 676
Hpy188I	TCNGA	2 cut(s)	605, 752
Hpy188III	TCNNGA	4 cut(s)	238, 266, 494, 551
Hpy8I	GTNNAC	5 cut(s)	40, 282, 325, 577, 676
HpyAV	CCTTC	4 cut(s)	106, 548, 689, 721
HpyCH4III	ACNGT	8 cut(s)	260, 322, 329, 419, 440, 539, 574, 593
HpyCH4IV	ACGT	1 cut(s)	697
HpyCH4V	TGCA	4 cut(s)	338, 349, 462, 530
HpyF3I	CTNAG	1 cut(s)	264
HpySE526I	ACGT	1 cut(s)	697
LmnI	GCTCC	1 cut(s)	522
Lsp1109I	GCAGC	3 cut(s)	158, 474, 574
LweI	GCATC	2 cut(s)	474, 728
MaeI	CTAG	1 cut(s)	587
MaeII	ACGT	1 cut(s)	697
MaeIII	GTNAC	3 cut(s)	413, 455, 698
MboII	GAAGA	5 cut(s)	118, 121, 130, 347, 446
MluCI	AATT	3 cut(s)	70, 247, 488
MseI	TTAA	3 cut(s)	75, 333, 372
MspR9I	CCNGG	1 cut(s)	521
Mva1269I	GAATGC	1 cut(s)	479
MvaI	CCWGG	1 cut(s)	521
NdeI	CATATG	1 cut(s)	670
NmuCI	GTSAC	2 cut(s)	413, 455
PctI	GAATGC	1 cut(s)	479
PfeI	GAWTC	2 cut(s)	269, 497
PflMI	CCANNNNNTGG	1 cut(s)	408
PkrI	GCNGC	3 cut(s)	148, 464, 564
Psp1406I	AACGTT	1 cut(s)	697
Psp6I	CCWGG	1 cut(s)	519
PspFI	CCCAGC	1 cut(s)	609
PspGI	CCWGG	1 cut(s)	519
PspPI	GGNCC	4 cut(s)	429, 510, 523, 714
PstI	CTGCAG	1 cut(s)	464
PstNI	CAGNNNCTG	2 cut(s)	468, 609
RsaI	GTAC	1 cut(s)	281
RsaNI	GTAC	1 cut(s)	280
SaqAI	TTAA	3 cut(s)	75, 333, 372
SatI	GCNGC	3 cut(s)	147, 463, 563
Sau96I	GGNCC	4 cut(s)	429, 510, 523, 714
ScrFI	CCNGG	1 cut(s)	521
SfaNI	GCATC	2 cut(s)	474, 728
SfcI	CTRYAG	1 cut(s)	460
SinI	GGWCC	2 cut(s)	429, 714
Sse9I	AATT	3 cut(s)	70, 247, 488
SspMI	CTAG	1 cut(s)	587
StyD4I	CCNGG	1 cut(s)	519
StyI	CCWWGG	1 cut(s)	629
TaaI	ACNGT	8 cut(s)	260, 322, 329, 419, 440, 539, 574, 593
TaiI	ACGT	1 cut(s)	700
TaqII	GACCGA	1 cut(s)	446
TasI	AATT	3 cut(s)	70, 247, 488
TfiI	GAWTC	2 cut(s)	269, 497
Tru1I	TTAA	3 cut(s)	75, 333, 372
Tru9I	TTAA	3 cut(s)	75, 333, 372
TscAI	CASTG	3 cut(s)	263, 327, 334
TseFI	GTSAC	2 cut(s)	413, 455
TseI	GCWGC	3 cut(s)	146, 462, 562
Tsp45I	GTSAC	2 cut(s)	413, 455
TspDTI	ATGAA	5 cut(s)	23, 80, 330, 376, 501
TspGWI	ACGGA	1 cut(s)	665
TspRI	CASTG	3 cut(s)	263, 327, 334
Van91I	CCANNNNNTGG	1 cut(s)	408
VpaK11BI	GGWCC	2 cut(s)	429, 714
XapI	RAATTY	1 cut(s)	488
XspI	CTAG	1 cut(s)	587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.