RLG00000032999

Endoplasmic

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
21918692 .. 21923317
4626 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032999

Sequence Viewer

Length: 1593 bp
ATGTCGTCGGCGACTTGCGAAGGCGATGTAGCTGGGAGGAATAGTGAGCAGAGATTGCTGCTAGCGCGGCCTGGAGGACCCATTTTCGAAGTTGGGCTCGAAGGAGGAGGAGGACAATATATAAAGGGACCTCACCGGAAAATACGGGAGGATTTGGTGGAATTGGAGATGGTGAAGGAGAAGAATGTGAAGAGATGGGTTTTAGTGGGTGCTGTGGTTGTGGTGTTATTAGCCATAGCTCTCACCTCTACCAGAGATTTTAATTCTAAACTCAACCTTTCTCTGTTCTTCAAGAATCCCAGTTTCTGCCAATGTCCTCAGGATTCACAGAAATACAGTGGCATTGTTGAGGACTGCTGTTGTGATTATGAAACGGTGGACAGTGTTAATGCAGAAGTGTTGTATCCTCTGCTACAAGAGATTGTTAAAACTCCGTTTTTTCGATATTTTAAGGCCAAGCTGTGGTGTGACTGTCCCTTCTGGACTGAAGATGGTATGTGCCTCCTGCGTGACTGCAGCGTCTGCGAATGCCCAGAAAATGAATTTCCGGAACCTTTAAAGAGGCCCTTTCACCACGACCTTCCATCCGACAGTTTGGTTTGTCAAAATAATAAGCTGCAGGGGTCTGTTGACCGCACTCTAGACAGTAGAGCTTTCAGAGGCTGGATCGAGACAGATAACCCTTGGACAAATGATGATGAGACTGATAATGATGAGATGACATATGTGAACCTTCTACTGAACCCTGAACGTTACACTGGCTATACTGGTCCATCAGCAAGAAGGATATGGGATGCTGTTTATTCTGAAAATTGCCCAAAATATTCATCTCAGGACATTTGCCAGGAGCAAAGAGTATTGTACAAATTAATATCGGGTCTTCACTCGTCAATTTCAATCCACATAGCTGCTGATTATCTTCTAGACAAGATTACCAATCTGTGGGGTCAAAACATGGAATTGATGCATGATCACGTTTTAAAATATCCAGATCGTGTTCAGAATTTGTACTTCGCATTCCTCTTTGTTCTCCGGGCAGTGACAAAAGCTGCAGATTACTTAGAGCAGGCTGAGTATGATACAGGTAATCATGAGGAAGACCTGAGAACAGAGTCTTTGATGAGGCAGCTACTTTACAATCCTAAACTCCAAGCTGCATGTCCCCTACCGTTTGATGAAGCAAAGCTCTGGAAAGGTCAGAGCGGTCCACAATTGAAGCAACACATTCAAAAGAAATTCAGAAACATTAGTGCATTAATGGATTGTGTGGGATGTGAGAAATGTCGGCTCTGGGGAAAGCTTCAAGTTCTTGGTCTTGGTACTGCATTGAAGATCCTCTTTTCTGTCGATGGTAAAAATCATCAAGATCAACCTCTGCAGCTGCAACGAAATGAAGTGATAGCTCTCATAAATCTGCTAAATCGACTCTCTGAATCTGTCAAATATGCTTGTCAAAGCGGACATTCAATCAAGAAAGTAGTGGAAGGAGGACGAGTTGTTGAACCAAATTCTATACAAACAATCAGTACATTACAAAGAATATGGGAAGCGGTGATCCCGATCAGGCTTAGGTTAGGGATGTTAGCACTGTAA

Protein Analysis

531

Amino Acids

60.37

Weight (kDa)

5.86

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERO1 PF04137 134 - 482 1.7e-121 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 518
AccB7I CCANNNNNTGG 2 cut(s) 462, 942
AccBSI CCGCTC 1 cut(s) 1203
AccII CGCG 1 cut(s) 67
AccIII TCCGGA 1 cut(s) 547
AciI CCGC 5 cut(s) 67, 634, 1203, 1458, 1550
AclI AACGTT 1 cut(s) 751
AclWI GGATC 3 cut(s) 674, 1327, 1549
AcsI RAATTY 4 cut(s) 542, 1003, 1235, 1507
AcuI CTGAAG 1 cut(s) 507
AfaI GTAC 4 cut(s) 863, 1010, 1321, 1528
AfiI CCNNNNNNNGG 2 cut(s) 462, 942
AgsI TTSAA 8 cut(s) 292, 897, 1216, 1229, 1304, 1330, 1467, 1502
AjnI CCWGG 2 cut(s) 70, 843
Alw26I GTCTC 2 cut(s) 665, 695
AlwI GGATC 3 cut(s) 674, 1327, 1549
AlwNI CAGNNNCTG 3 cut(s) 306, 522, 663
Aor13HI TCCGGA 1 cut(s) 547
AoxI GGCC 3 cut(s) 68, 453, 563
ApeKI GCWGC 9 cut(s) 58, 516, 616, 908, 1049, 1126, 1154, 1378, 1381
ApoI RAATTY 4 cut(s) 542, 1003, 1235, 1507
AseI ATTAAT 2 cut(s) 869, 1256
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 5 cut(s) 77, 128, 564, 770, 1205
AsuC2I CCSGG 1 cut(s) 1034
AsuHPI GGTGA 5 cut(s) 125, 184, 235, 563, 1564
AsuII TTCGAA 1 cut(s) 87
AsuNHI GCTAGC 1 cut(s) 61
AvaII GGWCC 4 cut(s) 77, 128, 770, 1205
AxyI CCTNAGG 1 cut(s) 318
BanII GRGCYC 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 872, 1104
BbvI GCAGC 9 cut(s) 45, 528, 603, 895, 1036, 1138, 1141, 1368, 1390
BccI CCATC 6 cut(s) 163, 189, 485, 592, 781, 1343
BciT130I CCWGG 2 cut(s) 72, 845
BciVI GTATCC 1 cut(s) 414
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 1034
BcoDI GTCTC 2 cut(s) 665, 695
BfaI CTAG 3 cut(s) 62, 641, 923
BfmI CTRYAG 4 cut(s) 514, 617, 1050, 1376
BfuI GTATCC 1 cut(s) 414
Bme1390I CCNGG 3 cut(s) 72, 845, 1034
Bme18I GGWCC 4 cut(s) 77, 128, 770, 1205
BmgT120I GGNCC 5 cut(s) 77, 128, 564, 770, 1205
BmiI GGNNCC 3 cut(s) 79, 129, 552
BmrFI CCNGG 3 cut(s) 72, 845, 1034
BmrI ACTGGG 1 cut(s) 294
BmsI GCATC 2 cut(s) 784, 954
BmtI GCTAGC 1 cut(s) 65
BmuI ACTGGG 1 cut(s) 294
BpiI GAAGAC 2 cut(s) 872, 1104
BpmI CTGGAG 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 1568
Bpu14I TTCGAA 1 cut(s) 87
BpuMI CCSGG 1 cut(s) 1034
BsaBI GATNNNNATC 1 cut(s) 1559
BsaJI CCNNGG 1 cut(s) 683
BsaWI WCCGGW 2 cut(s) 135, 547
BsaXI ACNNNNNCTCC 4 cut(s) 28, 58, 1479, 1509
Bsc4I CCNNNNNNNGG 2 cut(s) 462, 942
Bse1I ACTGG 3 cut(s) 300, 763, 772
Bse21I CCTNAGG 1 cut(s) 318
Bse8I GATNNNNATC 1 cut(s) 1559
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 2 cut(s) 72, 845
BseDI CCNNGG 1 cut(s) 683
BseGI GGATG 4 cut(s) 584, 799, 1277, 1584
BseJI GATNNNNATC 1 cut(s) 1559
BseLI CCNNNNNNNGG 2 cut(s) 462, 942
BseMII CTCAG 4 cut(s) 332, 845, 1062, 1094
BseNI ACTGG 3 cut(s) 300, 763, 772
BseRI GAGGAG 2 cut(s) 120, 123
BseXI GCAGC 9 cut(s) 45, 528, 603, 895, 1036, 1138, 1141, 1368, 1390
BseYI CCCAGC 1 cut(s) 32
Bsh1236I CGCG 1 cut(s) 67
BshFI GGCC 3 cut(s) 70, 455, 565
BsiSI CCGG 3 cut(s) 136, 548, 1033
BslFI GGGAC 3 cut(s) 141, 459, 1146
BslI CCNNNNNNNGG 2 cut(s) 462, 942
BsmAI GTCTC 2 cut(s) 665, 695
BsmFI GGGAC 3 cut(s) 141, 459, 1146
BsmI GAATGC 2 cut(s) 533, 1016
BsnI GGCC 3 cut(s) 70, 455, 565
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 1 cut(s) 99
Bsp13I TCCGGA 1 cut(s) 547
Bsp1407I TGTACA 1 cut(s) 861
Bsp143I GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
BspACI CCGC 5 cut(s) 67, 634, 1203, 1458, 1550
BspANI GGCC 3 cut(s) 70, 455, 565
BspCNI CTCAG 4 cut(s) 331, 844, 1063, 1095
BspEI TCCGGA 1 cut(s) 547
BspFNI CGCG 1 cut(s) 67
BspHI TCATGA 1 cut(s) 1090
BspLI GGNNCC 3 cut(s) 79, 129, 552
BspMAI CTGCAG 4 cut(s) 518, 621, 1054, 1380
BspOI GCTAGC 1 cut(s) 65
BspPI GGATC 3 cut(s) 674, 1327, 1549
BspT104I TTCGAA 1 cut(s) 87
BsrBI CCGCTC 1 cut(s) 1203
BsrGI TGTACA 1 cut(s) 861
BsrI ACTGG 3 cut(s) 300, 763, 772
BssECI CCNNGG 1 cut(s) 683
BssMI GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
BssT1I CCWWGG 1 cut(s) 683
Bst2UI CCWGG 2 cut(s) 72, 845
Bst4CI ACNGT 8 cut(s) 338, 376, 383, 473, 593, 647, 1170, 1590
Bst6I CTCTTC 1 cut(s) 185
BstAPI GCANNNNNTGC 2 cut(s) 55, 522
BstAUI TGTACA 1 cut(s) 861
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 63, 1068
BstDEI CTNAG 6 cut(s) 318, 831, 1060, 1071, 1103, 1568
BstF5I GGATG 4 cut(s) 584, 799, 1277, 1584
BstFNI CGCG 1 cut(s) 67
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 7 cut(s) 669, 973, 994, 1335, 1369, 1557, 1563
BstMAI GTCTC 2 cut(s) 665, 695
BstMBI GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
BstMWI GCNNNNNNNGC 4 cut(s) 55, 64, 67, 522
BstNI CCWGG 2 cut(s) 72, 845
BstNSI RCATGY 1 cut(s) 1161
BstSCI CCNGG 3 cut(s) 70, 843, 1032
BstSFI CTRYAG 4 cut(s) 514, 617, 1050, 1376
BstUI CGCG 1 cut(s) 67
BstV1I GCAGC 9 cut(s) 45, 528, 603, 895, 1036, 1138, 1141, 1368, 1390
BstV2I GAAGAC 2 cut(s) 872, 1104
BstX2I RGATCY 1 cut(s) 1332
BstYI RGATCY 1 cut(s) 1332
Bsu36I CCTNAGG 1 cut(s) 318
BsuI GTATCC 1 cut(s) 414
BsuRI GGCC 3 cut(s) 70, 455, 565
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 4 cut(s) 584, 799, 1277, 1584
BtsI GCAGTG 1 cut(s) 1044
BtsIMutI CAGTG 5 cut(s) 343, 388, 756, 1044, 1586
Cac8I GCNNGC 2 cut(s) 63, 1068
CaiI CAGNNNCTG 3 cut(s) 306, 522, 663
CciI TCATGA 1 cut(s) 1090
CfoI GCGC 1 cut(s) 67
Cfr13I GGNCC 5 cut(s) 77, 128, 564, 770, 1205
CseI GACGC 1 cut(s) 508
Csp6I GTAC 4 cut(s) 862, 1009, 1320, 1527
CviAII CATG 4 cut(s) 955, 968, 1091, 1158
CviQI GTAC 4 cut(s) 862, 1009, 1320, 1527
DdeI CTNAG 6 cut(s) 318, 831, 1060, 1071, 1103, 1568
DpnI GATC 7 cut(s) 668, 972, 993, 1334, 1368, 1556, 1562
DpnII GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
DraI TTTAAA 2 cut(s) 558, 981
DrdI GACNNNNNNGTC 1 cut(s) 518
DseDI GACNNNNNNGTC 1 cut(s) 518
Eam1104I CTCTTC 1 cut(s) 185
EarI CTCTTC 1 cut(s) 185
Eco130I CCWWGG 1 cut(s) 683
Eco24I GRGCYC 1 cut(s) 99
Eco47I GGWCC 4 cut(s) 77, 128, 770, 1205
Eco57I CTGAAG 1 cut(s) 507
Eco81I CCTNAGG 1 cut(s) 318
EcoO109I RGGNCCY 3 cut(s) 77, 128, 564
EcoRII CCWGG 2 cut(s) 70, 843
EcoT14I CCWWGG 1 cut(s) 683
EcoT22I ATGCAT 1 cut(s) 969
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 683
FaeI CATG 4 cut(s) 958, 971, 1094, 1161
FalI AAGNNNNNCTT 4 cut(s) 551, 583, 1322, 1354
FaqI GGGAC 3 cut(s) 141, 459, 1146
FatI CATG 4 cut(s) 954, 967, 1090, 1157
FauNDI CATATG 1 cut(s) 724
FbaI TGATCA 1 cut(s) 970
FokI GGATG 3 cut(s) 571, 806, 1284
FriOI GRGCYC 1 cut(s) 99
FspBI CTAG 3 cut(s) 62, 641, 923
GlaI GCGC 1 cut(s) 66
GsaI CCCAGC 1 cut(s) 36
GsuI CTGGAG 1 cut(s) 93
HaeIII GGCC 3 cut(s) 70, 455, 565
HapII CCGG 3 cut(s) 136, 548, 1033
HgaI GACGC 1 cut(s) 508
HhaI GCGC 1 cut(s) 67
Hin1II CATG 4 cut(s) 958, 971, 1094, 1161
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HindIII AAGCTT 1 cut(s) 1298
HinfI GANTC 5 cut(s) 295, 323, 1112, 1425, 1433
HpaII CCGG 3 cut(s) 136, 548, 1033
HphI GGTGA 5 cut(s) 125, 184, 235, 563, 1564
Hpy166II GTNNAC 4 cut(s) 379, 631, 730, 1208
Hpy188I TCNGA 7 cut(s) 589, 659, 808, 1002, 1200, 1241, 1432
Hpy8I GTNNAC 4 cut(s) 379, 631, 730, 1208
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 8 cut(s) 14, 95, 169, 487, 590, 743, 777, 1478
HpyCH4III ACNGT 8 cut(s) 338, 376, 383, 473, 593, 647, 1170, 1590
HpyCH4IV ACGT 2 cut(s) 751, 975
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 64, 67, 522
HpyF3I CTNAG 6 cut(s) 318, 831, 1060, 1071, 1103, 1568
HpySE526I ACGT 2 cut(s) 751, 975
Hsp92II CATG 4 cut(s) 958, 971, 1094, 1161
HspAI GCGC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 547
Ksp22I TGATCA 1 cut(s) 970
Kzo9I GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
LmnI GCTCC 1 cut(s) 847
Lsp1109I GCAGC 9 cut(s) 45, 528, 603, 895, 1036, 1138, 1141, 1368, 1390
LweI GCATC 2 cut(s) 784, 954
MaeI CTAG 3 cut(s) 62, 641, 923
MaeII ACGT 2 cut(s) 751, 975
MaeIII GTNAC 4 cut(s) 467, 509, 752, 1039
MalI GATC 7 cut(s) 668, 972, 993, 1334, 1368, 1556, 1562
MbiI CCGCTC 1 cut(s) 1203
MboI GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
MboII GAAGA 8 cut(s) 193, 202, 280, 500, 872, 911, 1109, 1342
MfeI CAATTG 1 cut(s) 1211
MflI RGATCY 1 cut(s) 1332
MhlI GDGCHC 1 cut(s) 99
MlyI GAGTC 2 cut(s) 1121, 1419
MmeI TCCRAC 1 cut(s) 612
Mph1103I ATGCAT 1 cut(s) 969
MroI TCCGGA 1 cut(s) 547
MseI TTAA 8 cut(s) 261, 387, 426, 450, 557, 869, 980, 1256
MspA1I CMGCKG 1 cut(s) 1381
MspI CCGG 3 cut(s) 136, 548, 1033
MspR9I CCNGG 3 cut(s) 72, 845, 1034
MunI CAATTG 1 cut(s) 1211
Mva1269I GAATGC 2 cut(s) 533, 1016
MvaI CCWGG 2 cut(s) 72, 845
MvnI CGCG 1 cut(s) 67
MwoI GCNNNNNNNGC 4 cut(s) 55, 64, 67, 522
NciI CCSGG 1 cut(s) 1034
NdeI CATATG 1 cut(s) 724
NdeII GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
NheI GCTAGC 1 cut(s) 61
NlaIII CATG 4 cut(s) 958, 971, 1094, 1161
NlaIV GGNNCC 3 cut(s) 79, 129, 552
NmuCI GTSAC 3 cut(s) 467, 509, 1039
NsiI ATGCAT 1 cut(s) 969
NspI RCATGY 1 cut(s) 1161
NspV TTCGAA 1 cut(s) 87
PagI TCATGA 1 cut(s) 1090
PctI GAATGC 2 cut(s) 533, 1016
PfeI GAWTC 3 cut(s) 295, 323, 1433
PflMI CCANNNNNTGG 2 cut(s) 462, 942
PleI GAGTC 2 cut(s) 1120, 1419
PpsI GAGTC 2 cut(s) 1120, 1419
PpuMI RGGWCCY 2 cut(s) 77, 128
PshBI ATTAAT 2 cut(s) 869, 1256
Psp1406I AACGTT 1 cut(s) 751
Psp5II RGGWCCY 2 cut(s) 77, 128
Psp6I CCWGG 2 cut(s) 70, 843
PspFI CCCAGC 1 cut(s) 32
PspGI CCWGG 2 cut(s) 70, 843
PspN4I GGNNCC 3 cut(s) 79, 129, 552
PspPI GGNCC 5 cut(s) 77, 128, 564, 770, 1205
PspPPI RGGWCCY 2 cut(s) 77, 128
PstI CTGCAG 4 cut(s) 518, 621, 1054, 1380
PstNI CAGNNNCTG 3 cut(s) 306, 522, 663
PsuI RGATCY 1 cut(s) 1332
PvuII CAGCTG 1 cut(s) 1381
RsaI GTAC 4 cut(s) 863, 1010, 1321, 1528
RsaNI GTAC 4 cut(s) 862, 1009, 1320, 1527
SaqAI TTAA 8 cut(s) 261, 387, 426, 450, 557, 869, 980, 1256
Sau3AI GATC 7 cut(s) 666, 970, 991, 1332, 1366, 1554, 1560
Sau96I GGNCC 5 cut(s) 77, 128, 564, 770, 1205
SchI GAGTC 2 cut(s) 1121, 1419
ScrFI CCNGG 3 cut(s) 72, 845, 1034
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 2 cut(s) 784, 954
SfcI CTRYAG 4 cut(s) 514, 617, 1050, 1376
SfuI TTCGAA 1 cut(s) 87
SinI GGWCC 4 cut(s) 77, 128, 770, 1205
SsiI CCGC 5 cut(s) 67, 634, 1203, 1458, 1550
SspI AATATT 1 cut(s) 824
SspMI CTAG 3 cut(s) 62, 641, 923
StyD4I CCNGG 3 cut(s) 70, 843, 1032
StyI CCWWGG 1 cut(s) 683
TaaI ACNGT 8 cut(s) 338, 376, 383, 473, 593, 647, 1170, 1590
TaiI ACGT 2 cut(s) 754, 978
TaqI TCGA 6 cut(s) 87, 99, 442, 669, 1347, 1423
TatI WGTACW 3 cut(s) 861, 1008, 1526
TauI GCSGC 1 cut(s) 70
TfiI GAWTC 3 cut(s) 295, 323, 1433
Tru1I TTAA 8 cut(s) 261, 387, 426, 450, 557, 869, 980, 1256
Tru9I TTAA 8 cut(s) 261, 387, 426, 450, 557, 869, 980, 1256
TscAI CASTG 5 cut(s) 343, 388, 763, 1044, 1593
TseFI GTSAC 3 cut(s) 467, 509, 1039
TseI GCWGC 9 cut(s) 58, 516, 616, 908, 1049, 1126, 1154, 1378, 1381
Tsp45I GTSAC 3 cut(s) 467, 509, 1039
TspDTI ATGAA 5 cut(s) 384, 555, 816, 1191, 1407
TspGWI ACGGA 1 cut(s) 423
TspRI CASTG 5 cut(s) 343, 388, 763, 1044, 1593
Van91I CCANNNNNTGG 2 cut(s) 462, 942
VpaK11BI GGWCC 4 cut(s) 77, 128, 770, 1205
VspI ATTAAT 2 cut(s) 869, 1256
XapI RAATTY 4 cut(s) 542, 1003, 1235, 1507
XbaI TCTAGA 2 cut(s) 640, 922
XceI RCATGY 1 cut(s) 1161
XspI CTAG 3 cut(s) 62, 641, 923
Zsp2I ATGCAT 1 cut(s) 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.