Rh5CG210100

Endoplasmic

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
21288387 .. 21292349
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG210100.1

Sequence Viewer

Length: 1479 bp
ATGTCTGTTAGTCCTTCGCTACAGCATTGGCGCGAGGATTTGGTGGAATTGGAGATGGTGAAGGAGAAGAATGTGAAGAGATGGGTTTTAGTGGGTGCTGTGGTTGTGGTCTTATTAGCCATAGCTCTCACCTCTACCAGAGATTTTAATTCTAAACTCAACCTTTCTCTGTTTTTCAAGAATCCCAGTTCCTGCCAATGTCCTCAGGATTCAAACAAATACAGTGGCCTTGTTGAGGACTGCTGTTGTGATTATGAAACGGTGGACAGTGTTAATGCAGAGGTGTTGCATCCTCTGCTACAAGAGATTGTTAAAACTCCTTTTTTTCGATATTTTAAGGCCAAGCTGTGGTGTGACTGTCCCTTCTGGACTGAAGATGGTATGTGCCTCCTGCGTGACTGCAGCGTCTGCGAATGCCCAGAAAATGAATTTCCGGAACCTTTCAAGAGGCCCTTTCACCGTGGCCTTCCATCCGACAGTTTGGTTTGTCAAGATGATAAGCTGCAGGGGTCTGTTGACCGCACTCTAGACAGTAGAGCATTCAGAGGCTGGATTGAGACAGATAATCCTTGGACAAATGATGACGAGACTGATAATGATGAGATGACATATGTGAACCTTCTACTGAATCCTGAACGTTACACTGGCTATACTGGTCCATCAGCAAGAAGGATATGGGATGCTGTTTATTCTGAAAATTGCCCAAAATATTCATCTCAGGACATTTGCCAGGAGCAAAGAGTATTGTACAAATTAATATCGGGTCTTCACTCATCAATTTCAATCCACATAGCTGCTGATTATCTTCTAGACAAGATTACCAATCTGTGGGGTCAAAACATGGAATTGATGCATGATCGCGTTTTAAAATATCCAGATCGTGTTCAAAATTTGTACTTCTCATTCCTCTTTGTTCTCCGGGCTGTGACAAAAGCTGCAGATTACTTAGAGCAGGCTGAGTATGATACAGGTAATCGTGAGGAAGACCTGAGAACAGAGTCTTTGATGAGGCAGCTACTTTACAATCCTAAACTCCAAGCTGCATGTCCCCTACCTTTTGATGAAGCAAAGCTCTGGAAAGGTCAGAGCGGACCCCAATTGAAGCAACAAATTCAAAAGAAATTCAGAAACATTAGTGCATTAATGGATTGTGTGGGATGTGAGAAATGTCGGCTCTGGGGAAAACTTCAAGTTCTTGGTCTTGGTACTGCATTGAAGATCCTCTTTTCTGTTGATGGTAAAAATCATCAAGATCAACCTCTGCAGCTGCAACGAAATGAAGTGATAGCTCTAGTAAATCTGCTAAATCGACTCTCTGAATCTGTCAAATTTGCTTGTCAAAGCAGACATTCAATCAAGAAAGTAGCAGAAGGAGGACGAGTTGTTGAACCTTATTCTATACAAACAATCAGTACATTGCAAAGAATATGGGAGGCGGTGATCCCGATCAGGCTTAGGTTAGGGATGTTAGCACTGTAA

Protein Analysis

492

Amino Acids

56.56

Weight (kDa)

5.88

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ERO1 PF04137 96 - 443 2.6e-122 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
AccB7I CCANNNNNTGG 2 cut(s) 348, 828
AccBSI CCGCTC 1 cut(s) 1089
AccII CGCG 2 cut(s) 33, 861
AccIII TCCGGA 1 cut(s) 433
AciI CCGC 3 cut(s) 520, 1089, 1436
AclI AACGTT 1 cut(s) 637
AclWI GGATC 2 cut(s) 1213, 1435
AcsI RAATTY 5 cut(s) 428, 889, 1110, 1121, 1328
AcuI CTGAAG 1 cut(s) 393
AfaI GTAC 4 cut(s) 749, 896, 1207, 1414
AfiI CCNNNNNNNGG 3 cut(s) 235, 348, 828
AjnI CCWGG 1 cut(s) 729
Alw26I GTCTC 2 cut(s) 551, 581
AlwI GGATC 2 cut(s) 1213, 1435
AlwNI CAGNNNCTG 3 cut(s) 192, 408, 549
Aor13HI TCCGGA 1 cut(s) 433
AoxI GGCC 4 cut(s) 226, 339, 449, 463
ApeKI GCWGC 8 cut(s) 402, 502, 794, 935, 1012, 1040, 1264, 1267
ApoI RAATTY 5 cut(s) 428, 889, 1110, 1121, 1328
AseI ATTAAT 2 cut(s) 755, 1142
AspLEI GCGC 1 cut(s) 33
AspS9I GGNCC 3 cut(s) 450, 656, 1091
AsuC2I CCSGG 1 cut(s) 920
AsuHPI GGTGA 4 cut(s) 70, 121, 449, 1450
AvaII GGWCC 2 cut(s) 656, 1091
AxyI CCTNAGG 1 cut(s) 204
BbsI GAAGAC 2 cut(s) 758, 990
BbvI GCAGC 8 cut(s) 414, 489, 781, 922, 1024, 1027, 1254, 1276
BccI CCATC 6 cut(s) 49, 75, 371, 478, 667, 1229
BciT130I CCWGG 1 cut(s) 731
BcnI CCSGG 1 cut(s) 920
BcoDI GTCTC 2 cut(s) 551, 581
BfaI CTAG 3 cut(s) 527, 809, 1292
BfmI CTRYAG 5 cut(s) 20, 400, 503, 936, 1262
BisI GCNGC 8 cut(s) 403, 503, 795, 936, 1013, 1041, 1265, 1268
BlsI GCNGC 8 cut(s) 404, 504, 796, 937, 1014, 1042, 1266, 1269
Bme1390I CCNGG 2 cut(s) 731, 920
Bme18I GGWCC 2 cut(s) 656, 1091
BmgT120I GGNCC 3 cut(s) 450, 656, 1091
BmiI GGNNCC 2 cut(s) 438, 1093
BmrFI CCNGG 2 cut(s) 731, 920
BmrI ACTGGG 1 cut(s) 180
BmsI GCATC 3 cut(s) 298, 670, 840
BmuI ACTGGG 1 cut(s) 180
BpiI GAAGAC 2 cut(s) 758, 990
Bpu10I CCTNAGC 1 cut(s) 1454
BpuMI CCSGG 1 cut(s) 920
BsaBI GATNNNNATC 1 cut(s) 1445
BsaJI CCNNGG 2 cut(s) 460, 569
BsaWI WCCGGW 1 cut(s) 433
BsaXI ACNNNNNCTCC 2 cut(s) 1365, 1395
Bsc4I CCNNNNNNNGG 3 cut(s) 235, 348, 828
Bse1I ACTGG 3 cut(s) 186, 649, 658
Bse21I CCTNAGG 1 cut(s) 204
Bse3DI GCAATG 1 cut(s) 1415
Bse8I GATNNNNATC 1 cut(s) 1445
BseAI TCCGGA 1 cut(s) 433
BseBI CCWGG 1 cut(s) 731
BseDI CCNNGG 2 cut(s) 460, 569
BseGI GGATG 5 cut(s) 289, 470, 685, 1163, 1470
BseJI GATNNNNATC 1 cut(s) 1445
BseLI CCNNNNNNNGG 3 cut(s) 235, 348, 828
BseMI GCAATG 1 cut(s) 1415
BseMII CTCAG 4 cut(s) 218, 731, 948, 980
BseNI ACTGG 3 cut(s) 186, 649, 658
BseXI GCAGC 8 cut(s) 414, 489, 781, 922, 1024, 1027, 1254, 1276
Bsh1236I CGCG 2 cut(s) 33, 861
BshFI GGCC 4 cut(s) 228, 341, 451, 465
BsiSI CCGG 2 cut(s) 434, 919
BslFI GGGAC 2 cut(s) 345, 1032
BslI CCNNNNNNNGG 3 cut(s) 235, 348, 828
BsmAI GTCTC 2 cut(s) 551, 581
BsmFI GGGAC 2 cut(s) 345, 1032
BsmI GAATGC 2 cut(s) 419, 539
BsnI GGCC 4 cut(s) 228, 341, 451, 465
Bsp13I TCCGGA 1 cut(s) 433
Bsp1407I TGTACA 1 cut(s) 747
Bsp143I GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
BspACI CCGC 3 cut(s) 520, 1089, 1436
BspANI GGCC 4 cut(s) 228, 341, 451, 465
BspCNI CTCAG 4 cut(s) 217, 730, 949, 981
BspEI TCCGGA 1 cut(s) 433
BspFNI CGCG 2 cut(s) 33, 861
BspLI GGNNCC 2 cut(s) 438, 1093
BspMAI CTGCAG 4 cut(s) 404, 507, 940, 1266
BspPI GGATC 2 cut(s) 1213, 1435
BsrBI CCGCTC 1 cut(s) 1089
BsrDI GCAATG 1 cut(s) 1415
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 3 cut(s) 186, 649, 658
BssECI CCNNGG 2 cut(s) 460, 569
BssMI GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
BssT1I CCWWGG 1 cut(s) 569
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 8 cut(s) 224, 262, 269, 359, 461, 479, 533, 1476
Bst6I CTCTTC 1 cut(s) 71
BstAPI GCANNNNNTGC 2 cut(s) 295, 408
BstAUI TGTACA 1 cut(s) 747
BstC8I GCNNGC 1 cut(s) 954
BstDEI CTNAG 6 cut(s) 204, 717, 946, 957, 989, 1454
BstDSI CCRYGG 1 cut(s) 460
BstENI CCTNNNNNAGG 1 cut(s) 233
BstF5I GGATG 5 cut(s) 289, 470, 685, 1163, 1470
BstFNI CGCG 2 cut(s) 33, 861
BstHHI GCGC 1 cut(s) 33
BstKTI GATC 6 cut(s) 859, 880, 1221, 1255, 1443, 1449
BstMAI GTCTC 2 cut(s) 551, 581
BstMBI GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
BstMWI GCNNNNNNNGC 2 cut(s) 295, 408
BstNI CCWGG 1 cut(s) 731
BstNSI RCATGY 1 cut(s) 1047
BstSCI CCNGG 2 cut(s) 729, 918
BstSFI CTRYAG 5 cut(s) 20, 400, 503, 936, 1262
BstUI CGCG 2 cut(s) 33, 861
BstV1I GCAGC 8 cut(s) 414, 489, 781, 922, 1024, 1027, 1254, 1276
BstV2I GAAGAC 2 cut(s) 758, 990
BstX2I RGATCY 1 cut(s) 1218
BstYI RGATCY 1 cut(s) 1218
Bsu36I CCTNAGG 1 cut(s) 204
BsuRI GGCC 4 cut(s) 228, 341, 451, 465
BtgI CCRYGG 1 cut(s) 460
BtsCI GGATG 5 cut(s) 289, 470, 685, 1163, 1470
BtsIMutI CAGTG 4 cut(s) 229, 274, 642, 1472
Cac8I GCNNGC 1 cut(s) 954
CaiI CAGNNNCTG 3 cut(s) 192, 408, 549
CfoI GCGC 1 cut(s) 33
Cfr13I GGNCC 3 cut(s) 450, 656, 1091
CseI GACGC 1 cut(s) 394
Csp6I GTAC 4 cut(s) 748, 895, 1206, 1413
CspCI CAANNNNNGTGG 2 cut(s) 205, 240
CviAII CATG 3 cut(s) 841, 854, 1044
CviQI GTAC 4 cut(s) 748, 895, 1206, 1413
DdeI CTNAG 6 cut(s) 204, 717, 946, 957, 989, 1454
DpnI GATC 6 cut(s) 858, 879, 1220, 1254, 1442, 1448
DpnII GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
DraI TTTAAA 1 cut(s) 867
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
Eam1104I CTCTTC 1 cut(s) 71
EarI CTCTTC 1 cut(s) 71
Eco130I CCWWGG 1 cut(s) 569
Eco47I GGWCC 2 cut(s) 656, 1091
Eco57I CTGAAG 1 cut(s) 393
Eco81I CCTNAGG 1 cut(s) 204
EcoNI CCTNNNNNAGG 1 cut(s) 233
EcoO109I RGGNCCY 1 cut(s) 450
EcoRII CCWGG 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 569
EcoT22I ATGCAT 1 cut(s) 855
ErhI CCWWGG 1 cut(s) 569
FaeI CATG 3 cut(s) 844, 857, 1047
FalI AAGNNNNNCTT 4 cut(s) 437, 469, 1208, 1240
FaqI GGGAC 2 cut(s) 345, 1032
FatI CATG 3 cut(s) 840, 853, 1043
FauNDI CATATG 1 cut(s) 610
Fnu4HI GCNGC 8 cut(s) 403, 503, 795, 936, 1013, 1041, 1265, 1268
FokI GGATG 4 cut(s) 276, 457, 692, 1170
Fsp4HI GCNGC 8 cut(s) 403, 503, 795, 936, 1013, 1041, 1265, 1268
FspBI CTAG 3 cut(s) 527, 809, 1292
GlaI GCGC 1 cut(s) 32
GluI GCNGC 8 cut(s) 403, 503, 795, 936, 1013, 1041, 1265, 1268
HaeIII GGCC 4 cut(s) 228, 341, 451, 465
HapII CCGG 2 cut(s) 434, 919
HgaI GACGC 1 cut(s) 394
HhaI GCGC 1 cut(s) 33
Hin1II CATG 3 cut(s) 844, 857, 1047
Hin6I GCGC 1 cut(s) 31
HinP1I GCGC 1 cut(s) 31
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HinfI GANTC 6 cut(s) 181, 209, 628, 998, 1311, 1319
HpaII CCGG 2 cut(s) 434, 919
HphI GGTGA 4 cut(s) 70, 121, 449, 1450
Hpy166II GTNNAC 3 cut(s) 265, 517, 616
Hpy188I TCNGA 6 cut(s) 475, 545, 694, 1086, 1127, 1318
Hpy8I GTNNAC 3 cut(s) 265, 517, 616
HpyAV CCTTC 7 cut(s) 24, 55, 373, 476, 629, 663, 1364
HpyCH4III ACNGT 8 cut(s) 224, 262, 269, 359, 461, 479, 533, 1476
HpyCH4IV ACGT 1 cut(s) 637
HpyF10VI GCNNNNNNNGC 2 cut(s) 295, 408
HpyF3I CTNAG 6 cut(s) 204, 717, 946, 957, 989, 1454
HpySE526I ACGT 1 cut(s) 637
Hsp92II CATG 3 cut(s) 844, 857, 1047
HspAI GCGC 1 cut(s) 31
Kpn2I TCCGGA 1 cut(s) 433
Kzo9I GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
LmnI GCTCC 1 cut(s) 733
Lsp1109I GCAGC 8 cut(s) 414, 489, 781, 922, 1024, 1027, 1254, 1276
LweI GCATC 3 cut(s) 298, 670, 840
MaeI CTAG 3 cut(s) 527, 809, 1292
MaeII ACGT 1 cut(s) 637
MaeIII GTNAC 4 cut(s) 353, 395, 638, 925
MalI GATC 6 cut(s) 858, 879, 1220, 1254, 1442, 1448
MbiI CCGCTC 1 cut(s) 1089
MboI GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
MboII GAAGA 7 cut(s) 79, 88, 386, 758, 797, 995, 1228
MfeI CAATTG 1 cut(s) 1097
MflI RGATCY 1 cut(s) 1218
MlyI GAGTC 2 cut(s) 1007, 1305
MmeI TCCRAC 1 cut(s) 498
Mph1103I ATGCAT 1 cut(s) 855
MroI TCCGGA 1 cut(s) 433
MseI TTAA 7 cut(s) 147, 273, 312, 336, 755, 866, 1142
MspA1I CMGCKG 1 cut(s) 1267
MspI CCGG 2 cut(s) 434, 919
MspR9I CCNGG 2 cut(s) 731, 920
MunI CAATTG 1 cut(s) 1097
Mva1269I GAATGC 2 cut(s) 419, 539
MvaI CCWGG 1 cut(s) 731
MvnI CGCG 2 cut(s) 33, 861
MwoI GCNNNNNNNGC 2 cut(s) 295, 408
NciI CCSGG 1 cut(s) 920
NdeI CATATG 1 cut(s) 610
NdeII GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
NlaIII CATG 3 cut(s) 844, 857, 1047
NlaIV GGNNCC 2 cut(s) 438, 1093
NmuCI GTSAC 3 cut(s) 353, 395, 925
NsiI ATGCAT 1 cut(s) 855
NspI RCATGY 1 cut(s) 1047
PctI GAATGC 2 cut(s) 419, 539
PfeI GAWTC 4 cut(s) 181, 209, 628, 1319
PflMI CCANNNNNTGG 2 cut(s) 348, 828
PkrI GCNGC 8 cut(s) 404, 504, 796, 937, 1014, 1042, 1266, 1269
PleI GAGTC 2 cut(s) 1006, 1305
PpsI GAGTC 2 cut(s) 1006, 1305
PshBI ATTAAT 2 cut(s) 755, 1142
Psp1406I AACGTT 1 cut(s) 637
Psp6I CCWGG 1 cut(s) 729
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 2 cut(s) 438, 1093
PspPI GGNCC 3 cut(s) 450, 656, 1091
PstI CTGCAG 4 cut(s) 404, 507, 940, 1266
PstNI CAGNNNCTG 3 cut(s) 192, 408, 549
PsuI RGATCY 1 cut(s) 1218
PvuII CAGCTG 1 cut(s) 1267
RsaI GTAC 4 cut(s) 749, 896, 1207, 1414
RsaNI GTAC 4 cut(s) 748, 895, 1206, 1413
SaqAI TTAA 7 cut(s) 147, 273, 312, 336, 755, 866, 1142
SatI GCNGC 8 cut(s) 403, 503, 795, 936, 1013, 1041, 1265, 1268
Sau3AI GATC 6 cut(s) 856, 877, 1218, 1252, 1440, 1446
Sau96I GGNCC 3 cut(s) 450, 656, 1091
SchI GAGTC 2 cut(s) 1007, 1305
ScrFI CCNGG 2 cut(s) 731, 920
SfaNI GCATC 3 cut(s) 298, 670, 840
SfcI CTRYAG 5 cut(s) 20, 400, 503, 936, 1262
SinI GGWCC 2 cut(s) 656, 1091
SsiI CCGC 3 cut(s) 520, 1089, 1436
SspI AATATT 1 cut(s) 710
SspMI CTAG 3 cut(s) 527, 809, 1292
StyD4I CCNGG 2 cut(s) 729, 918
StyI CCWWGG 1 cut(s) 569
TaaI ACNGT 8 cut(s) 224, 262, 269, 359, 461, 479, 533, 1476
TaiI ACGT 1 cut(s) 640
TaqI TCGA 2 cut(s) 328, 1309
TatI WGTACW 3 cut(s) 747, 894, 1412
TfiI GAWTC 4 cut(s) 181, 209, 628, 1319
Tru1I TTAA 7 cut(s) 147, 273, 312, 336, 755, 866, 1142
Tru9I TTAA 7 cut(s) 147, 273, 312, 336, 755, 866, 1142
TscAI CASTG 4 cut(s) 229, 274, 649, 1479
TseFI GTSAC 3 cut(s) 353, 395, 925
TseI GCWGC 8 cut(s) 402, 502, 794, 935, 1012, 1040, 1264, 1267
Tsp45I GTSAC 3 cut(s) 353, 395, 925
TspDTI ATGAA 5 cut(s) 270, 441, 702, 1077, 1293
TspRI CASTG 4 cut(s) 229, 274, 649, 1479
Van91I CCANNNNNTGG 2 cut(s) 348, 828
VpaK11BI GGWCC 2 cut(s) 656, 1091
VspI ATTAAT 2 cut(s) 755, 1142
XagI CCTNNNNNAGG 1 cut(s) 233
XapI RAATTY 5 cut(s) 428, 889, 1110, 1121, 1328
XbaI TCTAGA 2 cut(s) 526, 808
XceI RCATGY 1 cut(s) 1047
XspI CTAG 3 cut(s) 527, 809, 1292
Zsp2I ATGCAT 1 cut(s) 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.