Prupe.4G258900_v2.0.a1

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
18569014 .. 18572079
3066 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G258900.1

Sequence Viewer

Length: 513 bp
ATGGCAGCGGATGTTGGGAAATTCTTCGAGTCGGTTGGCAACTTCTTCTCCGGTGGCGATCAGATCCCATGGTGCGACCGCGACGTCATCGCTGGTTGTGAAAGGGAGGTTTCTGATGCTCAGAAAGGTTCCTCTGATGAATTTTTTAAAGAATGTATCATGCGATTATCATGGGCTCTTGTTCATTCAAGACAACCAGAAGATGTGCAACGTGGGATAGCAATGCTTGAAGCCTCTGTGGCTGAAGCTAATGCTAATGCCAGCCCTCTGCAGTTGAGAGAGAAGCTGTATCTTCTTGCTGTTGGGTATTACAGAAGTGGTGACCATTCTAGGAGTAGGGAACTTGTGGAACAGTGTTTGATGATTGCACCTGATTGGAGGCAGGCACTGACCCTTAAGAAAATGAATGAAGACAAGATCAAAAGAGATGGTGCGATTGGCATAGGTATTGCCGCAACTGCTGTTGGACTCATTGCTGGTGGAATTGCAGCAGCTGTGGCTCGCAAGAAGTGA

Protein Analysis

171

Amino Acids

18.55

Weight (kDa)

6.15

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AatII GACGTC 1 cut(s) 87
AccII CGCG 1 cut(s) 81
AciI CCGC 3 cut(s) 8, 79, 453
AclWI GGATC 1 cut(s) 58
AcsI RAATTY 2 cut(s) 20, 140
AcuI CTGAAG 1 cut(s) 264
AcyI GRCGYC 1 cut(s) 84
AflII CTTAAG 1 cut(s) 395
AgsI TTSAA 2 cut(s) 189, 230
AluBI AGCT 3 cut(s) 248, 286, 494
AluI AGCT 3 cut(s) 248, 286, 494
AlwI GGATC 1 cut(s) 58
AlwNI CAGNNNCTG 2 cut(s) 388, 494
ApeKI GCWGC 3 cut(s) 5, 488, 491
ApoI RAATTY 2 cut(s) 20, 140
Asp700I GAANNNNTTC 1 cut(s) 23
AsuHPI GGTGA 1 cut(s) 332
BanII GRGCYC 1 cut(s) 178
BbsI GAAGAC 1 cut(s) 417
BbvI GCAGC 3 cut(s) 17, 500, 503
BccI CCATC 1 cut(s) 422
BfaI CTAG 1 cut(s) 330
BfmI CTRYAG 1 cut(s) 269
BfrI CTTAAG 1 cut(s) 395
BglI GCCNNNNNGGC 1 cut(s) 239
BisI GCNGC 4 cut(s) 6, 453, 489, 492
BlsI GCNGC 4 cut(s) 7, 454, 490, 493
BmiI GGNNCC 1 cut(s) 130
BmsI GCATC 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 417
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 1 cut(s) 68
BsaWI WCCGGW 1 cut(s) 50
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
Bse3DI GCAATG 2 cut(s) 228, 471
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 1 cut(s) 16
BseMI GCAATG 2 cut(s) 228, 471
BseMII CTCAG 1 cut(s) 134
BseXI GCAGC 3 cut(s) 17, 500, 503
Bsh1236I CGCG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 79
BsiEI CGRYCG 1 cut(s) 79
BsiSI CCGG 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 178
Bsp143I GATC 3 cut(s) 58, 63, 417
Bsp19I CCATGG 1 cut(s) 68
BspACI CCGC 3 cut(s) 8, 79, 453
BspCNI CTCAG 1 cut(s) 133
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 273
BspPI GGATC 1 cut(s) 58
BspTI CTTAAG 1 cut(s) 395
BsrDI GCAATG 2 cut(s) 228, 471
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 3 cut(s) 58, 63, 417
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 354
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 395
BstC8I GCNNGC 3 cut(s) 262, 384, 502
BstDEI CTNAG 1 cut(s) 120
BstDSI CCRYGG 1 cut(s) 68
BstEII GGTNACC 1 cut(s) 320
BstF5I GGATG 1 cut(s) 16
BstFNI CGCG 1 cut(s) 81
BstKTI GATC 3 cut(s) 61, 66, 420
BstMBI GATC 3 cut(s) 58, 63, 417
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 3 cut(s) 239, 458, 497
BstPI GGTNACC 1 cut(s) 320
BstSFI CTRYAG 1 cut(s) 269
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 3 cut(s) 17, 500, 503
BstV2I GAAGAC 1 cut(s) 417
BstX2I RGATCY 1 cut(s) 63
BstYI RGATCY 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 1 cut(s) 16
BtsIMutI CAGTG 2 cut(s) 359, 386
Cac8I GCNNGC 3 cut(s) 262, 384, 502
CaiI CAGNNNCTG 2 cut(s) 388, 494
CviAII CATG 3 cut(s) 69, 160, 171
CviJI RGCY 8 cut(s) 176, 233, 242, 248, 264, 286, 494, 500
CviKI_1 RGCY 8 cut(s) 176, 233, 242, 248, 264, 286, 494, 500
DdeI CTNAG 1 cut(s) 120
DpnI GATC 3 cut(s) 60, 65, 419
DpnII GATC 3 cut(s) 58, 63, 417
DraI TTTAAA 1 cut(s) 148
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
Eco130I CCWWGG 1 cut(s) 68
Eco24I GRGCYC 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 264
Eco91I GGTNACC 1 cut(s) 320
EcoO65I GGTNACC 1 cut(s) 320
EcoT14I CCWWGG 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 3 cut(s) 72, 163, 174
FaiI YATR 4 cut(s) 70, 161, 172, 443
FatI CATG 3 cut(s) 68, 159, 170
Fnu4HI GCNGC 4 cut(s) 6, 453, 489, 492
FokI GGATG 1 cut(s) 23
FriOI GRGCYC 1 cut(s) 178
Fsp4HI GCNGC 4 cut(s) 6, 453, 489, 492
FspBI CTAG 1 cut(s) 330
GluI GCNGC 4 cut(s) 6, 453, 489, 492
HapII CCGG 1 cut(s) 51
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 3 cut(s) 72, 163, 174
HinfI GANTC 2 cut(s) 29, 468
HpaII CCGG 1 cut(s) 51
HphI GGTGA 1 cut(s) 332
Hpy188I TCNGA 4 cut(s) 63, 115, 123, 136
Hpy188III TCNNGA 1 cut(s) 189
Hpy99I CGWCG 1 cut(s) 86
HpyCH4III ACNGT 1 cut(s) 354
HpyCH4IV ACGT 2 cut(s) 84, 211
HpyCH4V TGCA 4 cut(s) 208, 271, 368, 488
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 458, 497
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 2 cut(s) 84, 211
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 3 cut(s) 72, 163, 174
Kzo9I GATC 3 cut(s) 58, 63, 417
LpnPI CCDG 7 cut(s) 64, 78, 210, 274, 368, 384, 462
Lsp1109I GCAGC 3 cut(s) 17, 500, 503
LweI GCATC 1 cut(s) 106
MaeI CTAG 1 cut(s) 330
MaeII ACGT 2 cut(s) 84, 211
MaeIII GTNAC 1 cut(s) 320
MalI GATC 3 cut(s) 60, 65, 419
MboI GATC 3 cut(s) 58, 63, 417
MboII GAAGA 5 cut(s) 16, 37, 212, 284, 422
MflI RGATCY 1 cut(s) 63
MhlI GDGCHC 1 cut(s) 178
MluCI AATT 3 cut(s) 20, 140, 483
MlyI GAGTC 2 cut(s) 38, 462
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 5 cut(s) 100, 142, 244, 276, 372
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 2 cut(s) 147, 396
MspA1I CMGCKG 2 cut(s) 8, 494
MspCI CTTAAG 1 cut(s) 395
MspI CCGG 1 cut(s) 51
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 3 cut(s) 239, 458, 497
NcoI CCATGG 1 cut(s) 68
NdeII GATC 3 cut(s) 58, 63, 417
NlaIII CATG 3 cut(s) 72, 163, 174
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 320
PdmI GAANNNNTTC 1 cut(s) 23
PkrI GCNGC 4 cut(s) 7, 454, 490, 493
PleI GAGTC 2 cut(s) 37, 462
PpsI GAGTC 2 cut(s) 37, 462
PspEI GGTNACC 1 cut(s) 320
PspN4I GGNNCC 1 cut(s) 130
PstI CTGCAG 1 cut(s) 273
PstNI CAGNNNCTG 2 cut(s) 388, 494
PsuI RGATCY 1 cut(s) 63
PvuII CAGCTG 1 cut(s) 494
SaqAI TTAA 2 cut(s) 147, 396
SatI GCNGC 4 cut(s) 6, 453, 489, 492
Sau3AI GATC 3 cut(s) 58, 63, 417
SchI GAGTC 2 cut(s) 38, 462
SduI GDGCHC 1 cut(s) 178
SetI ASST 9 cut(s) 87, 111, 130, 214, 250, 288, 373, 448, 496
SfaNI GCATC 1 cut(s) 106
SfcI CTRYAG 1 cut(s) 269
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
Sse9I AATT 3 cut(s) 20, 140, 483
SsiI CCGC 3 cut(s) 8, 79, 453
SspMI CTAG 1 cut(s) 330
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 354
TaiI ACGT 2 cut(s) 87, 214
TaqI TCGA 1 cut(s) 27
TasI AATT 3 cut(s) 20, 140, 483
TauI GCSGC 1 cut(s) 455
Tru1I TTAA 2 cut(s) 147, 396
Tru9I TTAA 2 cut(s) 147, 396
TscAI CASTG 2 cut(s) 359, 393
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 3 cut(s) 5, 488, 491
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 4 cut(s) 153, 173, 419, 423
TspRI CASTG 2 cut(s) 359, 393
Vha464I CTTAAG 1 cut(s) 395
XapI RAATTY 2 cut(s) 20, 140
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 1 cut(s) 330
ZraI GACGTC 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.