Rh5BG345100

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
52599242 .. 52601975
2734 bp
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UTR
Exon/CDS
Intron
Rh5BG345100.1

Sequence Viewer

Length: 438 bp
ATGGAGGCGAATATTGGGAAATTCTTTGAGTCGGTTGGCAATTTCTTCACTGGTAGTGAACAGATCCCATGGTGCGAGCGCGACATCATCGCCGGATGCGAAAGAGAAGTTGCTGAGGCTCAGAAAGGTTCCAATGATGAGTTTTTCAAAGAATGTCTCATGCGACTGTCGTGGTCTCTTGTTCATTCAAGGCATCCAGAAGATGTGCTACGTGGAATAGCAATGCTTGAAGCTTCTGTAAGTGATGCTAATAGCAGCCCTCTGCAATTGAGAGAGACTGTATATCTTCTTGCTGTTGGGCATTACAGAAGTGGTGACTATTCTAAGAGTAGGGAACTTGTTGAACAGTGTTTAATGGTATGGTATATAGTTACTTTATTTTATTATTGTAAACAATCCAGAGCATACTGCACGAGTATGTACTTTGAAATCACTTAA

Protein Analysis

145

Amino Acids

16.74

Weight (kDa)

5.07

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fis1_TPR_N PF14852 51 - 82 3.1e-09 Fis1 N-terminal tetratricopeptide repeat
Fis1_TPR_C PF14853 91 - 118 1.1e-08 Fis1 C-terminal tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 81
AclWI GGATC 1 cut(s) 58
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 1 cut(s) 422
AgsI TTSAA 5 cut(s) 148, 189, 230, 344, 428
AluBI AGCT 1 cut(s) 233
AluI AGCT 1 cut(s) 233
Alw26I GTCTC 3 cut(s) 161, 180, 269
AlwI GGATC 1 cut(s) 58
ApeKI GCWGC 1 cut(s) 255
ApoI RAATTY 1 cut(s) 20
AspLEI GCGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 326
BarI GAAGNNNNNNTAC 2 cut(s) 192, 224
BauI CACGAG 1 cut(s) 412
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 267
BcoDI GTCTC 3 cut(s) 161, 180, 269
BisI GCNGC 1 cut(s) 256
BlsI GCNGC 1 cut(s) 257
BmiI GGNNCC 1 cut(s) 130
BmsI GCATC 3 cut(s) 86, 202, 235
Bpu10I CCTNAGC 1 cut(s) 114
BsaAI YACGTR 1 cut(s) 212
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 228
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 2 cut(s) 101, 193
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 2 cut(s) 105, 134
BseNI ACTGG 1 cut(s) 55
BseXI GCAGC 1 cut(s) 267
BsgI GTGCAG 1 cut(s) 394
Bsh1236I CGCG 1 cut(s) 81
BsiSI CCGG 1 cut(s) 93
BsmAI GTCTC 3 cut(s) 161, 180, 269
Bso31I GGTCTC 1 cut(s) 180
Bsp143I GATC 1 cut(s) 63
Bsp19I CCATGG 1 cut(s) 68
BspCNI CTCAG 2 cut(s) 106, 133
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 130
BspPI GGATC 1 cut(s) 58
BspTNI GGTCTC 1 cut(s) 180
BsrDI GCAATG 1 cut(s) 228
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 1 cut(s) 63
BssSI CACGAG 1 cut(s) 412
BssT1I CCWWGG 1 cut(s) 68
Bst2BI CACGAG 1 cut(s) 412
Bst4CI ACNGT 3 cut(s) 168, 280, 348
BstBAI YACGTR 1 cut(s) 212
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 3 cut(s) 114, 120, 324
BstDSI CCRYGG 1 cut(s) 68
BstF5I GGATG 2 cut(s) 101, 193
BstFNI CGCG 1 cut(s) 81
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 1 cut(s) 66
BstMAI GTCTC 3 cut(s) 161, 180, 269
BstMBI GATC 1 cut(s) 63
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 1 cut(s) 267
BstX2I RGATCY 1 cut(s) 63
BstYI RGATCY 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 101, 193
BtsIMutI CAGTG 2 cut(s) 48, 353
Cac8I GCNNGC 1 cut(s) 77
CfoI GCGC 1 cut(s) 81
Csp6I GTAC 1 cut(s) 421
CviAII CATG 2 cut(s) 69, 160
CviJI RGCY 3 cut(s) 119, 233, 258
CviKI_1 RGCY 3 cut(s) 119, 233, 258
CviQI GTAC 1 cut(s) 421
DdeI CTNAG 3 cut(s) 114, 120, 324
DpnI GATC 1 cut(s) 65
DpnII GATC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 68
Eco31I GGTCTC 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 2 cut(s) 72, 163
FaiI YATR 8 cut(s) 70, 161, 283, 361, 366, 368, 406, 419
FatI CATG 2 cut(s) 68, 159
Fnu4HI GCNGC 1 cut(s) 256
FokI GGATG 2 cut(s) 108, 180
Fsp4HI GCNGC 1 cut(s) 256
GlaI GCGC 1 cut(s) 80
GluI GCNGC 1 cut(s) 256
HapII CCGG 1 cut(s) 93
HhaI GCGC 1 cut(s) 81
Hin1II CATG 2 cut(s) 72, 163
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 1 cut(s) 29
HpaII CCGG 1 cut(s) 93
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 2 cut(s) 59, 392
Hpy188I TCNGA 1 cut(s) 123
Hpy188III TCNNGA 2 cut(s) 197, 399
Hpy8I GTNNAC 2 cut(s) 59, 392
HpyCH4III ACNGT 3 cut(s) 168, 280, 348
HpyCH4IV ACGT 1 cut(s) 211
HpyCH4V TGCA 2 cut(s) 265, 411
HpyF3I CTNAG 3 cut(s) 114, 120, 324
HpySE526I ACGT 1 cut(s) 211
Hsp92II CATG 2 cut(s) 72, 163
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 1 cut(s) 63
LpnPI CCDG 4 cut(s) 36, 106, 210, 412
Lsp1109I GCAGC 1 cut(s) 267
LweI GCATC 3 cut(s) 86, 202, 235
MaeII ACGT 1 cut(s) 211
MaeIII GTNAC 2 cut(s) 314, 370
MalI GATC 1 cut(s) 65
MboI GATC 1 cut(s) 63
MboII GAAGA 3 cut(s) 37, 212, 278
MfeI CAATTG 1 cut(s) 266
MflI RGATCY 1 cut(s) 63
MluCI AATT 3 cut(s) 20, 40, 266
MlyI GAGTC 1 cut(s) 38
MnlI CCTC 2 cut(s) 109, 270
MseI TTAA 2 cut(s) 353, 436
MslI CAYNNNNRTG 1 cut(s) 416
MspI CCGG 1 cut(s) 93
MunI CAATTG 1 cut(s) 266
MvnI CGCG 1 cut(s) 81
NcoI CCATGG 1 cut(s) 68
NdeII GATC 1 cut(s) 63
NlaIII CATG 2 cut(s) 72, 163
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 314
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PkrI GCNGC 1 cut(s) 257
PleI GAGTC 1 cut(s) 37
PpsI GAGTC 1 cut(s) 37
Ppu21I YACGTR 1 cut(s) 212
PspN4I GGNNCC 1 cut(s) 130
PsuI RGATCY 1 cut(s) 63
RsaI GTAC 1 cut(s) 422
RsaNI GTAC 1 cut(s) 421
RseI CAYNNNNRTG 1 cut(s) 416
SaqAI TTAA 2 cut(s) 353, 436
SatI GCNGC 1 cut(s) 256
Sau3AI GATC 1 cut(s) 63
SchI GAGTC 1 cut(s) 38
SetI ASST 3 cut(s) 130, 214, 235
SfaNI GCATC 3 cut(s) 86, 202, 235
SmiMI CAYNNNNRTG 1 cut(s) 416
Sse9I AATT 3 cut(s) 20, 40, 266
SspI AATATT 1 cut(s) 13
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 3 cut(s) 168, 280, 348
TaiI ACGT 1 cut(s) 214
TasI AATT 3 cut(s) 20, 40, 266
TatI WGTACW 1 cut(s) 420
Tru1I TTAA 2 cut(s) 353, 436
Tru9I TTAA 2 cut(s) 353, 436
TscAI CASTG 2 cut(s) 55, 353
TseFI GTSAC 1 cut(s) 314
TseI GCWGC 1 cut(s) 255
Tsp45I GTSAC 1 cut(s) 314
TspDTI ATGAA 1 cut(s) 173
TspRI CASTG 2 cut(s) 55, 353
XapI RAATTY 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.