pycom03g12490

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
13077689 .. 13080365
2677 bp
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UTR
Exon/CDS
Intron
pycom03g12490.3

Sequence Viewer

Length: 507 bp
ATGGCAGATAACGTTGGGAAGTTCTTCGACTCGGTTAGCAATTTCTTCTCCGGTGACGATCAGATCCCATGGTGCGACCGCGACCTCATCGCTGGTATTGAAAAAGAGGTTGCTGATGCTCAGAATGGTTCCCCTGATCACGTTTTCAAGGAATGTCTCATGCGATTATCATGGGCTCTTGTTCATTCAAGGAATCCAGAAGACGTGCAACGTGGCATAGCAATGCTTGAAGAGGTTATGAGGGATCCAACTAAAGCCCCACTGGAAGCGAGAGAGCCGCCATATCTTCTTGCTGTTGGGTATTACAGAAGTGGTGACCATACCAGGTGCAGGGAACTTGTGGAACAGAGTTTGATGATTGCACCTGATTGGAGACAGGCACTGAACCTTAAGAAAATGAACGAAGCCCGGATCAAAAGAGATGGTGCGATTGGCATAGGAATTGCAGCGACTGCTGTTGGACTGCTTGCTGGTGGAATTGCAGCGGCTGTGGCTCGGAAGAAGTGA

Protein Analysis

169

Amino Acids

18.55

Weight (kDa)

5.94

Isoelectric Point (pI)

30.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 81
AciI CCGC 3 cut(s) 79, 278, 485
AclI AACGTT 1 cut(s) 12
AclWI GGATC 4 cut(s) 58, 239, 252, 419
AfiI CCNNNNNNNGG 1 cut(s) 330
AflII CTTAAG 1 cut(s) 389
AgsI TTSAA 4 cut(s) 101, 148, 189, 230
AjiI CACGTC 1 cut(s) 205
AjnI CCWGG 1 cut(s) 323
Alw26I GTCTC 2 cut(s) 161, 367
AlwI GGATC 4 cut(s) 58, 239, 252, 419
AlwNI CAGNNNCTG 3 cut(s) 382, 452, 488
ApeKI GCWGC 2 cut(s) 446, 482
Asp700I GAANNNNTTC 1 cut(s) 23
AsuC2I CCSGG 1 cut(s) 409
AsuHPI GGTGA 2 cut(s) 65, 326
BamHI GGATCC 1 cut(s) 244
BanII GRGCYC 1 cut(s) 178
BbsI GAAGAC 1 cut(s) 207
BbvI GCAGC 2 cut(s) 458, 494
BccI CCATC 1 cut(s) 416
BciT130I CCWGG 1 cut(s) 325
BclI TGATCA 1 cut(s) 136
BcnI CCSGG 1 cut(s) 409
BcoDI GTCTC 2 cut(s) 161, 367
BfrI CTTAAG 1 cut(s) 389
BisI GCNGC 4 cut(s) 278, 447, 483, 486
BlsI GCNGC 4 cut(s) 279, 448, 484, 487
Bme1390I CCNGG 2 cut(s) 325, 409
BmgBI CACGTC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 130, 246
BmrFI CCNGG 2 cut(s) 325, 409
BmsI GCATC 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 409
BsaJI CCNNGG 1 cut(s) 68
BsaWI WCCGGW 1 cut(s) 50
Bsc4I CCNNNNNNNGG 1 cut(s) 330
Bse1I ACTGG 1 cut(s) 267
Bse3DI GCAATG 1 cut(s) 228
BseBI CCWGG 1 cut(s) 325
BseDI CCNNGG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 330
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 267
BseXI GCAGC 2 cut(s) 458, 494
BsgI GTGCAG 1 cut(s) 349
Bsh1236I CGCG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 79
BsiEI CGRYCG 1 cut(s) 79
BsiSI CCGG 2 cut(s) 51, 409
BslI CCNNNNNNNGG 1 cut(s) 330
BsmAI GTCTC 2 cut(s) 161, 367
Bsp1286I GDGCHC 1 cut(s) 178
Bsp143I GATC 5 cut(s) 58, 63, 136, 244, 411
Bsp19I CCATGG 1 cut(s) 68
BspACI CCGC 3 cut(s) 79, 278, 485
BspCNI CTCAG 1 cut(s) 133
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 2 cut(s) 130, 246
BspPI GGATC 4 cut(s) 58, 239, 252, 419
BspTI CTTAAG 1 cut(s) 389
BsrDI GCAATG 1 cut(s) 228
BsrI ACTGG 1 cut(s) 267
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 5 cut(s) 58, 63, 136, 244, 411
BssT1I CCWWGG 1 cut(s) 68
Bst2UI CCWGG 1 cut(s) 325
Bst6I CTCTTC 1 cut(s) 225
BstAFI CTTAAG 1 cut(s) 389
BstAPI GCANNNNNTGC 1 cut(s) 452
BstC8I GCNNGC 1 cut(s) 468
BstDEI CTNAG 1 cut(s) 120
BstDSI CCRYGG 1 cut(s) 68
BstEII GGTNACC 1 cut(s) 314
BstFNI CGCG 1 cut(s) 81
BstKTI GATC 5 cut(s) 61, 66, 139, 247, 414
BstMAI GTCTC 2 cut(s) 161, 367
BstMBI GATC 5 cut(s) 58, 63, 136, 244, 411
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 452, 491
BstNI CCWGG 1 cut(s) 325
BstPI GGTNACC 1 cut(s) 314
BstSCI CCNGG 2 cut(s) 323, 407
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 2 cut(s) 458, 494
BstV2I GAAGAC 1 cut(s) 207
BstX2I RGATCY 2 cut(s) 63, 244
BstYI RGATCY 2 cut(s) 63, 244
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 73
BtrI CACGTC 1 cut(s) 205
BtsIMutI CAGTG 2 cut(s) 260, 380
Cac8I GCNNGC 1 cut(s) 468
CaiI CAGNNNCTG 3 cut(s) 382, 452, 488
CsiI ACCWGGT 1 cut(s) 323
CviAII CATG 3 cut(s) 69, 160, 171
CviJI RGCY 6 cut(s) 176, 257, 277, 407, 488, 494
CviKI_1 RGCY 6 cut(s) 176, 257, 277, 407, 488, 494
DdeI CTNAG 1 cut(s) 120
DpnI GATC 5 cut(s) 60, 65, 138, 246, 413
DpnII GATC 5 cut(s) 58, 63, 136, 244, 411
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 68
Eco24I GRGCYC 1 cut(s) 178
Eco91I GGTNACC 1 cut(s) 314
EcoO65I GGTNACC 1 cut(s) 314
EcoRII CCWGG 1 cut(s) 323
EcoT14I CCWWGG 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 3 cut(s) 72, 163, 174
FaiI YATR 8 cut(s) 70, 161, 172, 218, 239, 283, 321, 437
FatI CATG 3 cut(s) 68, 159, 170
FbaI TGATCA 1 cut(s) 136
Fnu4HI GCNGC 4 cut(s) 278, 447, 483, 486
FriOI GRGCYC 1 cut(s) 178
Fsp4HI GCNGC 4 cut(s) 278, 447, 483, 486
GluI GCNGC 4 cut(s) 278, 447, 483, 486
HapII CCGG 2 cut(s) 51, 409
Hin1II CATG 3 cut(s) 72, 163, 174
HinfI GANTC 2 cut(s) 29, 193
HpaII CCGG 2 cut(s) 51, 409
HphI GGTGA 2 cut(s) 65, 326
Hpy188I TCNGA 3 cut(s) 63, 123, 498
Hpy188III TCNNGA 1 cut(s) 197
HpyCH4IV ACGT 4 cut(s) 12, 141, 204, 211
HpyCH4V TGCA 5 cut(s) 208, 330, 362, 446, 482
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 491
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 4 cut(s) 12, 141, 204, 211
Hsp92II CATG 3 cut(s) 72, 163, 174
Ksp22I TGATCA 1 cut(s) 136
Kzo9I GATC 5 cut(s) 58, 63, 136, 244, 411
Lsp1109I GCAGC 2 cut(s) 458, 494
LweI GCATC 1 cut(s) 106
MabI ACCWGGT 1 cut(s) 323
MaeII ACGT 4 cut(s) 12, 141, 204, 211
MaeIII GTNAC 2 cut(s) 53, 314
MalI GATC 5 cut(s) 60, 65, 138, 246, 413
MboI GATC 5 cut(s) 58, 63, 136, 244, 411
MboII GAAGA 5 cut(s) 16, 37, 212, 242, 278
MflI RGATCY 2 cut(s) 63, 244
MhlI GDGCHC 1 cut(s) 178
MluCI AATT 3 cut(s) 40, 441, 477
MlyI GAGTC 1 cut(s) 23
MmeI TCCRAC 2 cut(s) 272, 439
MnlI CCTC 4 cut(s) 95, 100, 226, 234
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 1 cut(s) 390
MslI CAYNNNNRTG 1 cut(s) 221
MspA1I CMGCKG 1 cut(s) 485
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 2 cut(s) 51, 409
MspR9I CCNGG 2 cut(s) 325, 409
MvaI CCWGG 1 cut(s) 325
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 2 cut(s) 452, 491
NciI CCSGG 1 cut(s) 409
NcoI CCATGG 1 cut(s) 68
NdeII GATC 5 cut(s) 58, 63, 136, 244, 411
NlaIII CATG 3 cut(s) 72, 163, 174
NlaIV GGNNCC 2 cut(s) 130, 246
NmuCI GTSAC 2 cut(s) 53, 314
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 193
PkrI GCNGC 4 cut(s) 279, 448, 484, 487
PleI GAGTC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 23
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 1 cut(s) 323
PspEI GGTNACC 1 cut(s) 314
PspGI CCWGG 1 cut(s) 323
PspN4I GGNNCC 2 cut(s) 130, 246
PstNI CAGNNNCTG 3 cut(s) 382, 452, 488
PsuI RGATCY 2 cut(s) 63, 244
RseI CAYNNNNRTG 1 cut(s) 221
SaqAI TTAA 1 cut(s) 390
SatI GCNGC 4 cut(s) 278, 447, 483, 486
Sau3AI GATC 5 cut(s) 58, 63, 136, 244, 411
SchI GAGTC 1 cut(s) 23
ScrFI CCNGG 2 cut(s) 325, 409
SduI GDGCHC 1 cut(s) 178
SexAI ACCWGGT 1 cut(s) 323
SfaNI GCATC 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 389
SmoI CTYRAG 1 cut(s) 389
Sse9I AATT 3 cut(s) 40, 441, 477
SsiI CCGC 3 cut(s) 79, 278, 485
StyD4I CCNGG 2 cut(s) 323, 407
StyI CCWWGG 1 cut(s) 68
TaiI ACGT 4 cut(s) 15, 144, 207, 214
TaqI TCGA 1 cut(s) 27
TasI AATT 3 cut(s) 40, 441, 477
TauI GCSGC 2 cut(s) 280, 488
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 2 cut(s) 267, 387
TseFI GTSAC 2 cut(s) 53, 314
TseI GCWGC 2 cut(s) 446, 482
Tsp45I GTSAC 2 cut(s) 53, 314
TspDTI ATGAA 2 cut(s) 173, 413
TspRI CASTG 2 cut(s) 267, 387
Vha464I CTTAAG 1 cut(s) 389
XmnI GAANNNNTTC 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.