Rh5CG373000

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
47942382 .. 47944759
2378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG373000.1

Sequence Viewer

Length: 471 bp
ATGGAGGCGAATATTGGGAAATTCTTTGAGTCGGTTGGCAATTTCTTCACTGGTAGTGAACAGATCCCATGGTGCGAGCGCGACATCATCGCCGGATGTGAAAGAGAAGTTGCTGAGGCTCAGAAAGGTTCCAATGATGAGTTTTTCAAAGAATGTCTCATGCGACTGTCATGGTCTCTTGTTCATTCAAGGCATCCAGAAGATGTGCTACGTGGAATAGCCATGCTTGAAGCTTCTGTAAGTGATGCTAATAGCAACCCTCTGCAATTGAGAGAGACTATATATCTTCTTGCTGTTGGGTTTTACAGAAGTGGTGACTATTCTAAGAGTAGGGAACTTGTTGAACAGTGTTTAATGGTATGGTATATAGTTACTTTATTTGATTATTGTAAACAATCCAGAGCATACTGCATGAGTATGTACTTTGAAATCACTTGCTCTTCATATGTAATATTGATCTATCTTCATTGA

Protein Analysis

156

Amino Acids

18.07

Weight (kDa)

4.96

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fis1_TPR_N PF14852 51 - 82 3.5e-09 Fis1 N-terminal tetratricopeptide repeat
Fis1_TPR_C PF14853 91 - 118 2.7e-07 Fis1 C-terminal tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 81
AclWI GGATC 1 cut(s) 58
AcsI RAATTY 1 cut(s) 20
AfaI GTAC 1 cut(s) 422
AgsI TTSAA 5 cut(s) 148, 189, 230, 344, 428
AluBI AGCT 1 cut(s) 233
AluI AGCT 1 cut(s) 233
Alw26I GTCTC 3 cut(s) 161, 180, 269
AlwI GGATC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 20
AspLEI GCGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 326
BarI GAAGNNNNNNTAC 2 cut(s) 192, 224
BbvCI CCTCAGC 1 cut(s) 114
BcoDI GTCTC 3 cut(s) 161, 180, 269
BmiI GGNNCC 1 cut(s) 130
BmsI GCATC 2 cut(s) 202, 235
Bpu10I CCTNAGC 1 cut(s) 114
BsaAI YACGTR 1 cut(s) 212
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 1 cut(s) 68
Bse1I ACTGG 1 cut(s) 55
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 2 cut(s) 101, 193
BseMII CTCAG 2 cut(s) 105, 134
BseNI ACTGG 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 81
BsiSI CCGG 1 cut(s) 93
BsmAI GTCTC 3 cut(s) 161, 180, 269
Bso31I GGTCTC 1 cut(s) 180
Bsp143I GATC 2 cut(s) 63, 456
Bsp19I CCATGG 1 cut(s) 68
BspCNI CTCAG 2 cut(s) 106, 133
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 130
BspPI GGATC 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 445
BspTNI GGTCTC 1 cut(s) 180
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 2 cut(s) 63, 456
BssT1I CCWWGG 1 cut(s) 68
Bst4CI ACNGT 2 cut(s) 168, 348
Bst6I CTCTTC 1 cut(s) 445
BstBAI YACGTR 1 cut(s) 212
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 3 cut(s) 114, 120, 324
BstDSI CCRYGG 1 cut(s) 68
BstF5I GGATG 2 cut(s) 101, 193
BstFNI CGCG 1 cut(s) 81
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 2 cut(s) 66, 459
BstMAI GTCTC 3 cut(s) 161, 180, 269
BstMBI GATC 2 cut(s) 63, 456
BstUI CGCG 1 cut(s) 81
BstX2I RGATCY 1 cut(s) 63
BstYI RGATCY 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 101, 193
BtsIMutI CAGTG 2 cut(s) 48, 353
Cac8I GCNNGC 1 cut(s) 77
CfoI GCGC 1 cut(s) 81
Csp6I GTAC 1 cut(s) 421
CviAII CATG 5 cut(s) 69, 160, 171, 223, 412
CviJI RGCY 3 cut(s) 119, 221, 233
CviKI_1 RGCY 3 cut(s) 119, 221, 233
CviQI GTAC 1 cut(s) 421
DdeI CTNAG 3 cut(s) 114, 120, 324
DpnI GATC 2 cut(s) 65, 458
DpnII GATC 2 cut(s) 63, 456
Eam1104I CTCTTC 1 cut(s) 445
EarI CTCTTC 1 cut(s) 445
Eco130I CCWWGG 1 cut(s) 68
Eco31I GGTCTC 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 5 cut(s) 72, 163, 174, 226, 415
FatI CATG 5 cut(s) 68, 159, 170, 222, 411
FauNDI CATATG 1 cut(s) 445
FokI GGATG 2 cut(s) 108, 180
GlaI GCGC 1 cut(s) 80
HapII CCGG 1 cut(s) 93
HhaI GCGC 1 cut(s) 81
Hin1II CATG 5 cut(s) 72, 163, 174, 226, 415
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 1 cut(s) 29
HpaII CCGG 1 cut(s) 93
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 2 cut(s) 59, 392
Hpy188I TCNGA 1 cut(s) 123
Hpy188III TCNNGA 2 cut(s) 197, 399
Hpy8I GTNNAC 2 cut(s) 59, 392
HpyCH4III ACNGT 2 cut(s) 168, 348
HpyCH4IV ACGT 1 cut(s) 211
HpyCH4V TGCA 2 cut(s) 265, 411
HpyF3I CTNAG 3 cut(s) 114, 120, 324
HpySE526I ACGT 1 cut(s) 211
Hsp92II CATG 5 cut(s) 72, 163, 174, 226, 415
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 2 cut(s) 63, 456
LguI GCTCTTC 1 cut(s) 445
LpnPI CCDG 4 cut(s) 36, 106, 210, 412
LweI GCATC 2 cut(s) 202, 235
MaeII ACGT 1 cut(s) 211
MaeIII GTNAC 2 cut(s) 314, 370
MalI GATC 2 cut(s) 65, 458
MboI GATC 2 cut(s) 63, 456
MboII GAAGA 5 cut(s) 37, 212, 278, 432, 455
MfeI CAATTG 1 cut(s) 266
MflI RGATCY 1 cut(s) 63
MluCI AATT 3 cut(s) 20, 40, 266
MlyI GAGTC 1 cut(s) 38
MnlI CCTC 2 cut(s) 109, 270
MseI TTAA 1 cut(s) 353
MslI CAYNNNNRTG 1 cut(s) 416
MspI CCGG 1 cut(s) 93
MunI CAATTG 1 cut(s) 266
MvnI CGCG 1 cut(s) 81
NcoI CCATGG 1 cut(s) 68
NdeI CATATG 1 cut(s) 445
NdeII GATC 2 cut(s) 63, 456
NlaIII CATG 5 cut(s) 72, 163, 174, 226, 415
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 314
PciSI GCTCTTC 1 cut(s) 445
PleI GAGTC 1 cut(s) 37
PpsI GAGTC 1 cut(s) 37
Ppu21I YACGTR 1 cut(s) 212
PspN4I GGNNCC 1 cut(s) 130
PsuI RGATCY 1 cut(s) 63
RsaI GTAC 1 cut(s) 422
RsaNI GTAC 1 cut(s) 421
RseI CAYNNNNRTG 1 cut(s) 416
SapI GCTCTTC 1 cut(s) 445
SaqAI TTAA 1 cut(s) 353
Sau3AI GATC 2 cut(s) 63, 456
SchI GAGTC 1 cut(s) 38
SetI ASST 3 cut(s) 130, 214, 235
SfaNI GCATC 2 cut(s) 202, 235
SmiMI CAYNNNNRTG 1 cut(s) 416
Sse9I AATT 3 cut(s) 20, 40, 266
SspI AATATT 2 cut(s) 13, 453
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 2 cut(s) 168, 348
TaiI ACGT 1 cut(s) 214
TasI AATT 3 cut(s) 20, 40, 266
TatI WGTACW 1 cut(s) 420
Tru1I TTAA 1 cut(s) 353
Tru9I TTAA 1 cut(s) 353
TscAI CASTG 2 cut(s) 55, 353
TseFI GTSAC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 314
TspDTI ATGAA 3 cut(s) 173, 432, 455
TspRI CASTG 2 cut(s) 55, 353
XapI RAATTY 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.