pycom11g16310

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
17902357 .. 17904008
1652 bp
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UTR
Exon/CDS
Intron
pycom11g16310.5

Sequence Viewer

Length: 507 bp
ATGGCAGATAACGTTGCGAAATTCTTCGAATCAGTTGCCAATTTCTTCTCCGGCGGCGATCAGATCCCATGGTGTGACCGCGACCTCATCGCCGGTATTGAGAAAGAGGTTGCTGATGCTCAGAATGGTTCCCCTGATCACGTTTTCAAAGAATGTCTTATGCGATTATCATGGGCTCTTGTTCATTCAAGGCATCCAGAAGATGTGCAACGTGGCATAGCAATGCTTGAAGAGGTTAGGAGGGATCCTACTAAAGCCCCTCCGGAAGTGAGAGAGCCGCTATATCTTCTTGCTGTTGGGTATTACAGAAGTGGTGACCATACCAGGTGCAGGGAACTTGTAGAACAGTGTTTGATGGTTGCACCTGATTGGAGACAGGCACTGAACCTTAAGAAAATGAATGAAGCCAAGATAAAAAGAGATGGTGCGATTGGCATAGGGATAGCAGCGACTGCTGTTGGACTGCTTGCTGGTGGAATTGCAGCGGCTGTGGCTAGGAAGAAGTGA

Protein Analysis

169

Amino Acids

18.56

Weight (kDa)

6.9

Isoelectric Point (pI)

34.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 81
AccIII TCCGGA 1 cut(s) 262
AciI CCGC 4 cut(s) 54, 79, 278, 485
AclI AACGTT 1 cut(s) 12
AclWI GGATC 3 cut(s) 58, 239, 252
AcsI RAATTY 1 cut(s) 20
AfiI CCNNNNNNNGG 1 cut(s) 330
AflII CTTAAG 1 cut(s) 389
AgsI TTSAA 3 cut(s) 148, 189, 230
AjnI CCWGG 1 cut(s) 323
Alw26I GTCTC 1 cut(s) 367
AlwI GGATC 3 cut(s) 58, 239, 252
AlwNI CAGNNNCTG 3 cut(s) 382, 452, 488
Aor13HI TCCGGA 1 cut(s) 262
ApeKI GCWGC 2 cut(s) 446, 482
ApoI RAATTY 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 23
AsuHPI GGTGA 1 cut(s) 326
AsuII TTCGAA 1 cut(s) 27
BamHI GGATCC 1 cut(s) 244
BanII GRGCYC 1 cut(s) 178
BbvI GCAGC 2 cut(s) 458, 494
BccI CCATC 2 cut(s) 349, 416
BcgI CGANNNNNNTGC 2 cut(s) 17, 51
BciT130I CCWGG 1 cut(s) 325
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 367
BfaI CTAG 1 cut(s) 495
BfrI CTTAAG 1 cut(s) 389
BisI GCNGC 5 cut(s) 55, 278, 447, 483, 486
BlsI GCNGC 5 cut(s) 56, 279, 448, 484, 487
Bme1390I CCNGG 1 cut(s) 325
BmiI GGNNCC 2 cut(s) 130, 246
BmrFI CCNGG 1 cut(s) 325
BmsI GCATC 2 cut(s) 106, 202
Bpu14I TTCGAA 1 cut(s) 27
BsaJI CCNNGG 1 cut(s) 68
BsaWI WCCGGW 1 cut(s) 262
Bsc4I CCNNNNNNNGG 1 cut(s) 330
Bse118I RCCGGY 1 cut(s) 92
Bse3DI GCAATG 1 cut(s) 228
BseAI TCCGGA 1 cut(s) 262
BseBI CCWGG 1 cut(s) 325
BseDI CCNNGG 1 cut(s) 68
BseGI GGATG 1 cut(s) 193
BseLI CCNNNNNNNGG 1 cut(s) 330
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 134
BseXI GCAGC 2 cut(s) 458, 494
BsgI GTGCAG 1 cut(s) 349
Bsh1236I CGCG 1 cut(s) 81
BsiSI CCGG 3 cut(s) 51, 93, 263
BslI CCNNNNNNNGG 1 cut(s) 330
BsmAI GTCTC 1 cut(s) 367
Bsp119I TTCGAA 1 cut(s) 27
Bsp1286I GDGCHC 1 cut(s) 178
Bsp13I TCCGGA 1 cut(s) 262
Bsp143I GATC 4 cut(s) 58, 63, 136, 244
Bsp19I CCATGG 1 cut(s) 68
BspACI CCGC 4 cut(s) 54, 79, 278, 485
BspCNI CTCAG 1 cut(s) 133
BspEI TCCGGA 1 cut(s) 262
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 2 cut(s) 130, 246
BspPI GGATC 3 cut(s) 58, 239, 252
BspT104I TTCGAA 1 cut(s) 27
BspTI CTTAAG 1 cut(s) 389
BsrDI GCAATG 1 cut(s) 228
BsrFI RCCGGY 1 cut(s) 92
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 1 cut(s) 68
BssMI GATC 4 cut(s) 58, 63, 136, 244
BssT1I CCWWGG 1 cut(s) 68
Bst2UI CCWGG 1 cut(s) 325
Bst4CI ACNGT 1 cut(s) 348
Bst6I CTCTTC 1 cut(s) 225
BstAFI CTTAAG 1 cut(s) 389
BstAPI GCANNNNNTGC 1 cut(s) 452
BstBI TTCGAA 1 cut(s) 27
BstC8I GCNNGC 1 cut(s) 468
BstDEI CTNAG 1 cut(s) 120
BstDSI CCRYGG 1 cut(s) 68
BstEII GGTNACC 1 cut(s) 314
BstF5I GGATG 1 cut(s) 193
BstFNI CGCG 1 cut(s) 81
BstKTI GATC 4 cut(s) 61, 66, 139, 247
BstMAI GTCTC 1 cut(s) 367
BstMBI GATC 4 cut(s) 58, 63, 136, 244
BstMWI GCNNNNNNNGC 2 cut(s) 452, 491
BstNI CCWGG 1 cut(s) 325
BstPI GGTNACC 1 cut(s) 314
BstSCI CCNGG 1 cut(s) 323
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 2 cut(s) 458, 494
BstX2I RGATCY 2 cut(s) 63, 244
BstYI RGATCY 2 cut(s) 63, 244
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 1 cut(s) 193
BtsIMutI CAGTG 2 cut(s) 353, 380
Cac8I GCNNGC 1 cut(s) 468
CaiI CAGNNNCTG 3 cut(s) 382, 452, 488
Cfr10I RCCGGY 1 cut(s) 92
CsiI ACCWGGT 1 cut(s) 323
CviAII CATG 2 cut(s) 69, 171
CviJI RGCY 6 cut(s) 176, 257, 277, 407, 488, 494
CviKI_1 RGCY 6 cut(s) 176, 257, 277, 407, 488, 494
DdeI CTNAG 1 cut(s) 120
DpnI GATC 4 cut(s) 60, 65, 138, 246
DpnII GATC 4 cut(s) 58, 63, 136, 244
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 68
Eco24I GRGCYC 1 cut(s) 178
Eco91I GGTNACC 1 cut(s) 314
EcoO65I GGTNACC 1 cut(s) 314
EcoRII CCWGG 1 cut(s) 323
EcoT14I CCWWGG 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 2 cut(s) 72, 174
FaiI YATR 7 cut(s) 70, 161, 172, 218, 283, 321, 437
FalI AAGNNNNNCTT 2 cut(s) 141, 173
FatI CATG 2 cut(s) 68, 170
FbaI TGATCA 1 cut(s) 136
Fnu4HI GCNGC 5 cut(s) 55, 278, 447, 483, 486
FokI GGATG 1 cut(s) 180
FriOI GRGCYC 1 cut(s) 178
Fsp4HI GCNGC 5 cut(s) 55, 278, 447, 483, 486
FspBI CTAG 1 cut(s) 495
GluI GCNGC 5 cut(s) 55, 278, 447, 483, 486
HapII CCGG 3 cut(s) 51, 93, 263
Hin1II CATG 2 cut(s) 72, 174
HinfI GANTC 1 cut(s) 29
HpaII CCGG 3 cut(s) 51, 93, 263
HphI GGTGA 1 cut(s) 326
Hpy188I TCNGA 2 cut(s) 63, 123
Hpy188III TCNNGA 2 cut(s) 197, 263
HpyCH4III ACNGT 1 cut(s) 348
HpyCH4IV ACGT 3 cut(s) 12, 141, 211
HpyCH4V TGCA 4 cut(s) 208, 330, 362, 482
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 491
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 3 cut(s) 12, 141, 211
Hsp92II CATG 2 cut(s) 72, 174
Kpn2I TCCGGA 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 136
Kzo9I GATC 4 cut(s) 58, 63, 136, 244
Lsp1109I GCAGC 2 cut(s) 458, 494
LweI GCATC 2 cut(s) 106, 202
MabI ACCWGGT 1 cut(s) 323
MaeI CTAG 1 cut(s) 495
MaeII ACGT 3 cut(s) 12, 141, 211
MaeIII GTNAC 2 cut(s) 74, 314
MalI GATC 4 cut(s) 60, 65, 138, 246
MboI GATC 4 cut(s) 58, 63, 136, 244
MboII GAAGA 5 cut(s) 16, 37, 212, 242, 278
MflI RGATCY 2 cut(s) 63, 244
MhlI GDGCHC 1 cut(s) 178
MluCI AATT 3 cut(s) 20, 40, 477
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 5 cut(s) 95, 100, 226, 234, 270
MroI TCCGGA 1 cut(s) 262
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 1 cut(s) 390
MslI CAYNNNNRTG 1 cut(s) 221
MspA1I CMGCKG 1 cut(s) 485
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 3 cut(s) 51, 93, 263
MspR9I CCNGG 1 cut(s) 325
MvaI CCWGG 1 cut(s) 325
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 2 cut(s) 452, 491
NcoI CCATGG 1 cut(s) 68
NdeII GATC 4 cut(s) 58, 63, 136, 244
NlaIII CATG 2 cut(s) 72, 174
NlaIV GGNNCC 2 cut(s) 130, 246
NmuCI GTSAC 2 cut(s) 74, 314
NspV TTCGAA 1 cut(s) 27
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 29
PkrI GCNGC 5 cut(s) 56, 279, 448, 484, 487
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 1 cut(s) 323
PspEI GGTNACC 1 cut(s) 314
PspGI CCWGG 1 cut(s) 323
PspN4I GGNNCC 2 cut(s) 130, 246
PstNI CAGNNNCTG 3 cut(s) 382, 452, 488
PsuI RGATCY 2 cut(s) 63, 244
RseI CAYNNNNRTG 1 cut(s) 221
SaqAI TTAA 1 cut(s) 390
SatI GCNGC 5 cut(s) 55, 278, 447, 483, 486
Sau3AI GATC 4 cut(s) 58, 63, 136, 244
ScrFI CCNGG 1 cut(s) 325
SduI GDGCHC 1 cut(s) 178
SetI ASST 9 cut(s) 15, 87, 111, 144, 214, 237, 329, 367, 390
SexAI ACCWGGT 1 cut(s) 323
SfaNI GCATC 2 cut(s) 106, 202
SfuI TTCGAA 1 cut(s) 27
SmiMI CAYNNNNRTG 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 389
SmoI CTYRAG 1 cut(s) 389
Sse9I AATT 3 cut(s) 20, 40, 477
SsiI CCGC 4 cut(s) 54, 79, 278, 485
SspMI CTAG 1 cut(s) 495
StyD4I CCNGG 1 cut(s) 323
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 348
TaiI ACGT 3 cut(s) 15, 144, 214
TaqI TCGA 1 cut(s) 27
TasI AATT 3 cut(s) 20, 40, 477
TauI GCSGC 3 cut(s) 57, 280, 488
TfiI GAWTC 1 cut(s) 29
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 2 cut(s) 353, 387
TseFI GTSAC 2 cut(s) 74, 314
TseI GCWGC 2 cut(s) 446, 482
Tsp45I GTSAC 2 cut(s) 74, 314
TspDTI ATGAA 3 cut(s) 173, 413, 417
TspRI CASTG 2 cut(s) 353, 387
Vha464I CTTAAG 1 cut(s) 389
XapI RAATTY 1 cut(s) 20
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 1 cut(s) 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.