Rw5G031670

Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
52476316 .. 52478531
2216 bp
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UTR
Exon/CDS
Intron
Rw5G031670.1

Sequence Viewer

Length: 507 bp
ATGGAGGCGAATATTGGGAAATTCTTTGAGTCGGTTGGCAATTTCTTCACTGGTAGTGAACAGATCCCATGGTGCGAGCGCGACATCATCGCCGGATGCGAAAGAGAAGTTGCTGAGGCTCAGAAAGGTTCCAATGATGAGTTTTTCAAAGAATGTCTCATGCGACTGTCGTGGTCTCTTGTTCATTCAAGGCATCCAGAAGATGTGCTACGTGGAATAGCAATGCTTGAAGCTTCTGTAAGTGATGCTAATAGCAGCCCTCTGCAATTGAGAGAGACTATATATCTTCTTGCTGTTGGGTATTACAGAAATGGTGACTATTCTAAGAGTAGGGAACTTGTTGAACAGTGTTTAATGATTGCACCTGCTTGGAGACAGGCACTGACCCTTAAGAAAATGAATGAAGACCGGATCAAAAGAGATGGTGCGATAGGGATAGGTATTGCTGCAACTGCTGTTGGACTCATTGCTGGTGGAATTGCTGCAGCCGTGGCTCGGAAAAAGTGA

Protein Analysis

168

Amino Acids

18.56

Weight (kDa)

6.16

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fis1_TPR_N PF14852 51 - 82 4e-09 Fis1 N-terminal tetratricopeptide repeat
Fis1_TPR_C PF14853 91 - 142 1.7e-19 Fis1 C-terminal tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 373
AccII CGCG 1 cut(s) 81
AclWI GGATC 2 cut(s) 58, 419
AcsI RAATTY 1 cut(s) 20
AfiI CCNNNNNNNGG 1 cut(s) 495
AflII CTTAAG 1 cut(s) 389
AgsI TTSAA 4 cut(s) 148, 189, 230, 344
AluBI AGCT 1 cut(s) 233
AluI AGCT 1 cut(s) 233
Alw26I GTCTC 4 cut(s) 161, 180, 269, 367
AlwI GGATC 2 cut(s) 58, 419
AlwNI CAGNNNCTG 1 cut(s) 382
ApeKI GCWGC 4 cut(s) 255, 446, 482, 485
ApoI RAATTY 1 cut(s) 20
AspLEI GCGC 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 326
BarI GAAGNNNNNNTAC 2 cut(s) 192, 224
BbsI GAAGAC 1 cut(s) 411
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 4 cut(s) 267, 433, 469, 497
BccI CCATC 1 cut(s) 416
BceAI ACGGC 1 cut(s) 473
BcoDI GTCTC 4 cut(s) 161, 180, 269, 367
BfmI CTRYAG 1 cut(s) 483
BfrI CTTAAG 1 cut(s) 389
BfuAI ACCTGC 1 cut(s) 373
BisI GCNGC 4 cut(s) 256, 447, 483, 486
BlsI GCNGC 4 cut(s) 257, 448, 484, 487
BmiI GGNNCC 1 cut(s) 130
BmsI GCATC 3 cut(s) 86, 202, 235
BpiI GAAGAC 1 cut(s) 411
Bpu10I CCTNAGC 1 cut(s) 114
BsaAI YACGTR 1 cut(s) 212
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 2 cut(s) 68, 489
BsaWI WCCGGW 1 cut(s) 408
Bsc4I CCNNNNNNNGG 1 cut(s) 495
Bse1I ACTGG 1 cut(s) 55
Bse3DI GCAATG 2 cut(s) 228, 465
BseDI CCNNGG 2 cut(s) 68, 489
BseGI GGATG 2 cut(s) 101, 193
BseLI CCNNNNNNNGG 1 cut(s) 495
BseMI GCAATG 2 cut(s) 228, 465
BseMII CTCAG 2 cut(s) 105, 134
BseNI ACTGG 1 cut(s) 55
BseXI GCAGC 4 cut(s) 267, 433, 469, 497
Bsh1236I CGCG 1 cut(s) 81
BsiSI CCGG 2 cut(s) 93, 409
BslI CCNNNNNNNGG 1 cut(s) 495
BsmAI GTCTC 4 cut(s) 161, 180, 269, 367
Bso31I GGTCTC 1 cut(s) 180
Bsp143I GATC 2 cut(s) 63, 411
Bsp19I CCATGG 1 cut(s) 68
BspCNI CTCAG 2 cut(s) 106, 133
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 373
BspPI GGATC 2 cut(s) 58, 419
BspTI CTTAAG 1 cut(s) 389
BspTNI GGTCTC 1 cut(s) 180
BsrDI GCAATG 2 cut(s) 228, 465
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 2 cut(s) 68, 489
BssMI GATC 2 cut(s) 63, 411
BssT1I CCWWGG 1 cut(s) 68
Bst4CI ACNGT 2 cut(s) 168, 348
BstAFI CTTAAG 1 cut(s) 389
BstBAI YACGTR 1 cut(s) 212
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 3 cut(s) 114, 120, 324
BstDSI CCRYGG 2 cut(s) 68, 489
BstF5I GGATG 2 cut(s) 101, 193
BstFNI CGCG 1 cut(s) 81
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 2 cut(s) 66, 414
BstMAI GTCTC 4 cut(s) 161, 180, 269, 367
BstMBI GATC 2 cut(s) 63, 411
BstMWI GCNNNNNNNGC 2 cut(s) 452, 491
BstSFI CTRYAG 1 cut(s) 483
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 4 cut(s) 267, 433, 469, 497
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 1 cut(s) 63
BstYI RGATCY 1 cut(s) 63
BtgI CCRYGG 2 cut(s) 68, 489
BtgZI GCGATG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 101, 193
BtsIMutI CAGTG 3 cut(s) 48, 353, 380
BveI ACCTGC 1 cut(s) 373
Cac8I GCNNGC 1 cut(s) 77
CaiI CAGNNNCTG 1 cut(s) 382
CfoI GCGC 1 cut(s) 81
CviAII CATG 2 cut(s) 69, 160
CviJI RGCY 5 cut(s) 119, 233, 258, 488, 494
CviKI_1 RGCY 5 cut(s) 119, 233, 258, 488, 494
DdeI CTNAG 3 cut(s) 114, 120, 324
DpnI GATC 2 cut(s) 65, 413
DpnII GATC 2 cut(s) 63, 411
Eco130I CCWWGG 1 cut(s) 68
Eco31I GGTCTC 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 68
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 2 cut(s) 72, 163
FaiI YATR 4 cut(s) 70, 161, 281, 283
FatI CATG 2 cut(s) 68, 159
Fnu4HI GCNGC 4 cut(s) 256, 447, 483, 486
FokI GGATG 2 cut(s) 108, 180
Fsp4HI GCNGC 4 cut(s) 256, 447, 483, 486
GlaI GCGC 1 cut(s) 80
GluI GCNGC 4 cut(s) 256, 447, 483, 486
HapII CCGG 2 cut(s) 93, 409
HhaI GCGC 1 cut(s) 81
Hin1II CATG 2 cut(s) 72, 163
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 2 cut(s) 29, 462
HpaII CCGG 2 cut(s) 93, 409
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 1 cut(s) 59
Hpy188I TCNGA 2 cut(s) 123, 498
Hpy188III TCNNGA 1 cut(s) 197
Hpy8I GTNNAC 1 cut(s) 59
HpyCH4III ACNGT 2 cut(s) 168, 348
HpyCH4IV ACGT 1 cut(s) 211
HpyCH4V TGCA 4 cut(s) 265, 362, 449, 485
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 491
HpyF3I CTNAG 3 cut(s) 114, 120, 324
HpySE526I ACGT 1 cut(s) 211
Hsp92II CATG 2 cut(s) 72, 163
HspAI GCGC 1 cut(s) 79
Kzo9I GATC 2 cut(s) 63, 411
LpnPI CCDG 7 cut(s) 36, 106, 210, 362, 378, 422, 456
Lsp1109I GCAGC 4 cut(s) 267, 433, 469, 497
LweI GCATC 3 cut(s) 86, 202, 235
MaeII ACGT 1 cut(s) 211
MaeIII GTNAC 1 cut(s) 314
MalI GATC 2 cut(s) 65, 413
MboI GATC 2 cut(s) 63, 411
MboII GAAGA 4 cut(s) 37, 212, 278, 416
MfeI CAATTG 1 cut(s) 266
MflI RGATCY 1 cut(s) 63
MluCI AATT 4 cut(s) 20, 40, 266, 477
MlyI GAGTC 2 cut(s) 38, 456
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 2 cut(s) 109, 270
MseI TTAA 2 cut(s) 353, 390
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 2 cut(s) 93, 409
MunI CAATTG 1 cut(s) 266
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 2 cut(s) 452, 491
NcoI CCATGG 1 cut(s) 68
NdeII GATC 2 cut(s) 63, 411
NlaIII CATG 2 cut(s) 72, 163
NlaIV GGNNCC 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 314
PaqCI CACCTGC 1 cut(s) 373
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PkrI GCNGC 4 cut(s) 257, 448, 484, 487
PleI GAGTC 2 cut(s) 37, 456
PpsI GAGTC 2 cut(s) 37, 456
Ppu21I YACGTR 1 cut(s) 212
PspN4I GGNNCC 1 cut(s) 130
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 1 cut(s) 382
PsuI RGATCY 1 cut(s) 63
SaqAI TTAA 2 cut(s) 353, 390
SatI GCNGC 4 cut(s) 256, 447, 483, 486
Sau3AI GATC 2 cut(s) 63, 411
SchI GAGTC 2 cut(s) 38, 456
SetI ASST 5 cut(s) 130, 214, 235, 367, 442
SfaNI GCATC 3 cut(s) 86, 202, 235
SfcI CTRYAG 1 cut(s) 483
SmlI CTYRAG 1 cut(s) 389
SmoI CTYRAG 1 cut(s) 389
Sse9I AATT 4 cut(s) 20, 40, 266, 477
SspI AATATT 1 cut(s) 13
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 2 cut(s) 168, 348
TaiI ACGT 1 cut(s) 214
TasI AATT 4 cut(s) 20, 40, 266, 477
Tru1I TTAA 2 cut(s) 353, 390
Tru9I TTAA 2 cut(s) 353, 390
TscAI CASTG 3 cut(s) 55, 353, 387
TseFI GTSAC 1 cut(s) 314
TseI GCWGC 4 cut(s) 255, 446, 482, 485
Tsp45I GTSAC 1 cut(s) 314
TspDTI ATGAA 3 cut(s) 173, 413, 417
TspRI CASTG 3 cut(s) 55, 353, 387
Vha464I CTTAAG 1 cut(s) 389
XapI RAATTY 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.