Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009391

Physical Location & Seq

Genomic Coordinates Reverse (-)

4836076 .. 4838073

Gene Structure 1998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G044000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGAGAACATGAGGAGGATGTTCTTGATAGTACTAACAATGGTTTTTCATGGCACTGGAACTTCTGTTGAGGATGATGGACCTCTATTTCTTGACTATTACAAAGAAAAGTGCCCTTTGGCAGAAGAGATTGTGAGGCGTAGTGTTGCAATTGCGGTGGCTAAAGATCCTCGAATGGCGGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGGTGCGATGCATCTGTTCTTTTGGACAGCTATGGAGGCATAGTCAGTGAAAAGCAAGCCGGCCCAAACCTAGATTCTTTACGAGGATTTGAGGTTGTCGATGAGATAAAGTATCACCTGGAAGAGGCTTGTCCAACAACAGTTTCATGTGCTGATATTCTAGCCTTGGCTGCTCGCGATGCTGTTGCATTGAGAGGTGGACCAAGCTGGAATGTGTGGCTAGGCAGGAGAGACTCACTGGAAGCAAGCTTCAGTGGTGCCAACCAGTTCATCCCCGCTCCAAATTCCTCTCTAGAAACTCTCATTGCCAATTTCAAACAACAGGGCCTTGATGTAGGAGACTTGGTTGCCTTGTCAGGTAGCCACACAATGGGAAGGGCAAGATGTTTAAGTTTCAGACAGAGGGTGTATGATGTAAACTTCAGAGGAAAATACGAATTATACGATAAATACAAGAGATATACGACCTTTCGAAGAATGCTACGGTCCATATGCCCGAAATCAGGGAGGGACGATGAATTAGCACCGCTTGATTTTCAGACACCAGCCAGATTTGACAACCATTACTACCTTAACATACTCCAAGGGAAAGGTTTATTGGGGTCTGATAATGTGTTGGTCACACAAGATCATGACGGGGAGATACTAAAGCAGGTGTGGGCTTATGCCTCTGATCAAAAGCTTTTCTTTGCTTCATTTGTAAAATCAGTGATCAAGATGGGAAATATCAATACATTGACTGGAAACCAAGGAGAGATCAGGAAGCATTGTAGGTTTGTCAATGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

337

Amino Acids

37.69

Weight (kDa)

7.07

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35380 AT2G35380
fragaria_vesca	FvH4_5g21320 FvH4_5g21320
malus_domestica	MD06G1038800.v1.1
prunus_persica	Prupe.5G044000_v2.0.a1
pyrus_communis	pycom06g03260
rosa_chinensis	RchiOBHm_Chr5g0075581 RchiOBHm_Chr7g0208661
rosa_laevigata	RLG00000003203 RLG00000036579
rosa_multiflora	Rmu_co8139090.1_g000001 Rmu_sc0000072.1_g000004
rosa_roxburghii	Rroxscaffold_1G00005990 Rroxscaffold_3G00250330
rosa_rugosa	Rorug05G0440900 Rorug07G0105300
rosa_samantha	Rh5DG530300 Rh7AG240300 Rh7DG246300
rosa_wichuraiana	Rw5G046160 Rw7G020390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	865
Acc36I	ACCTGC	1 cut(s)	865
AccB1I	GGYRCC	1 cut(s)	479
AccB7I	CCANNNNNTGG	1 cut(s)	592
AccBSI	CCGCTC	1 cut(s)	500
AccII	CGCG	1 cut(s)	399
AciI	CCGC	4 cut(s)	155, 179, 498, 749
AclWI	GGATC	1 cut(s)	161
AcsI	RAATTY	1 cut(s)	505
AcuI	CTGAAG	2 cut(s)	457, 628
AfaI	GTAC	1 cut(s)	33
AfiI	CCNNNNNNNGG	3 cut(s)	346, 592, 725
AgsI	TTSAA	1 cut(s)	538
AjnI	CCWGG	1 cut(s)	339
AjuI	GAANNNNNNNTTGG	6 cut(s)	280, 312, 349, 381, 803, 835
AluBI	AGCT	4 cut(s)	252, 429, 471, 904
AluI	AGCT	4 cut(s)	252, 429, 471, 904
Alw26I	GTCTC	2 cut(s)	447, 555
AlwI	GGATC	1 cut(s)	161
AoxI	GGCC	2 cut(s)	283, 547
ApeKI	GCWGC	1 cut(s)	392
ApoI	RAATTY	1 cut(s)	505
AspS9I	GGNCC	5 cut(s)	80, 284, 422, 547, 708
AsuHPI	GGTGA	1 cut(s)	329
AsuII	TTCGAA	1 cut(s)	694
AvaII	GGWCC	3 cut(s)	80, 422, 708
BaeGI	GKGCMC	1 cut(s)	116
BanI	GGYRCC	1 cut(s)	479
BbvI	GCAGC	1 cut(s)	379
BccI	CCATC	2 cut(s)	71, 934
BcgI	CGANNNNNNTGC	2 cut(s)	389, 423
BciT130I	CCWGG	1 cut(s)	341
BclI	TGATCA	2 cut(s)	895, 933
BcoDI	GTCTC	2 cut(s)	447, 555
BfaI	CTAG	5 cut(s)	293, 383, 443, 515, 1009
BfuAI	ACCTGC	1 cut(s)	865
BisI	GCNGC	2 cut(s)	180, 393
BlsI	GCNGC	2 cut(s)	181, 394
BmcAI	AGTACT	1 cut(s)	33
Bme1390I	CCNGG	1 cut(s)	341
Bme18I	GGWCC	3 cut(s)	80, 422, 708
BmgT120I	GGNCC	5 cut(s)	80, 284, 422, 547, 708
BmiI	GGNNCC	1 cut(s)	481
BmrFI	CCNGG	1 cut(s)	341
BmsI	GCATC	3 cut(s)	220, 242, 391
Bpu14I	TTCGAA	1 cut(s)	694
BsaJI	CCNNGG	3 cut(s)	387, 805, 970
BsaXI	ACNNNNNCTCC	4 cut(s)	249, 279, 552, 582
Bsc4I	CCNNNNNNNGG	3 cut(s)	346, 592, 725
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	4 cut(s)	61, 465, 487, 967
Bse3DI	GCAATG	1 cut(s)	525
BseBI	CCWGG	1 cut(s)	341
BseDI	CCNNGG	3 cut(s)	387, 805, 970
BseGI	GGATG	3 cut(s)	24, 79, 492
BseLI	CCNNNNNNNGG	3 cut(s)	346, 592, 725
BseMI	GCAATG	1 cut(s)	525
BseNI	ACTGG	4 cut(s)	61, 465, 487, 967
BseRI	GAGGAG	1 cut(s)	28
BseSI	GKGCMC	1 cut(s)	116
BseXI	GCAGC	1 cut(s)	379
Bsh1236I	CGCG	1 cut(s)	399
BshFI	GGCC	2 cut(s)	285, 549
BshNI	GGYRCC	1 cut(s)	479
BsiSI	CCGG	1 cut(s)	282
BslFI	GGGAC	1 cut(s)	746
BslI	CCNNNNNNNGG	3 cut(s)	346, 592, 725
BsmAI	GTCTC	2 cut(s)	447, 555
BsmFI	GGGAC	1 cut(s)	746
BsmI	GAATGC	1 cut(s)	705
BsnI	GGCC	2 cut(s)	285, 549
Bsp119I	TTCGAA	1 cut(s)	694
Bsp1286I	GDGCHC	1 cut(s)	116
Bsp143I	GATC	5 cut(s)	166, 850, 895, 933, 978
Bsp68I	TCGCGA	1 cut(s)	399
BspACI	CCGC	4 cut(s)	155, 179, 498, 749
BspANI	GGCC	2 cut(s)	285, 549
BspFNI	CGCG	1 cut(s)	399
BspHI	TCATGA	2 cut(s)	205, 853
BspLI	GGNNCC	1 cut(s)	481
BspMI	ACCTGC	1 cut(s)	865
BspPI	GGATC	1 cut(s)	161
BspT104I	TTCGAA	1 cut(s)	694
BspT107I	GGYRCC	1 cut(s)	479
BsrBI	CCGCTC	1 cut(s)	500
BsrDI	GCAATG	1 cut(s)	525
BsrFI	RCCGGY	1 cut(s)	281
BsrI	ACTGG	4 cut(s)	61, 465, 487, 967
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	3 cut(s)	387, 805, 970
BssMI	GATC	5 cut(s)	166, 850, 895, 933, 978
BssT1I	CCWWGG	3 cut(s)	387, 805, 970
Bst2UI	CCWGG	1 cut(s)	341
Bst4CI	ACNGT	2 cut(s)	364, 708
Bst6I	CTCTTC	2 cut(s)	120, 339
BstBI	TTCGAA	1 cut(s)	694
BstC8I	GCNNGC	5 cut(s)	197, 279, 283, 397, 469
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	3 cut(s)	24, 79, 492
BstFNI	CGCG	1 cut(s)	399
BstKTI	GATC	5 cut(s)	169, 853, 898, 936, 981
BstMAI	GTCTC	2 cut(s)	447, 555
BstMBI	GATC	5 cut(s)	166, 850, 895, 933, 978
BstMWI	GCNNNNNNNGC	3 cut(s)	258, 392, 401
BstNI	CCWGG	1 cut(s)	341
BstSCI	CCNGG	1 cut(s)	339
BstSLI	GKGCMC	1 cut(s)	116
BstUI	CGCG	1 cut(s)	399
BstV1I	GCAGC	1 cut(s)	379
BstX2I	RGATCY	1 cut(s)	166
BstYI	RGATCY	1 cut(s)	166
BsuRI	GGCC	2 cut(s)	285, 549
BtgZI	GCGATG	2 cut(s)	243, 414
BtsCI	GGATG	3 cut(s)	24, 79, 492
BtsIMutI	CAGTG	5 cut(s)	54, 274, 458, 481, 936
BtuMI	TCGCGA	1 cut(s)	399
BveI	ACCTGC	1 cut(s)	865
Cac8I	GCNNGC	5 cut(s)	197, 279, 283, 397, 469
CciI	TCATGA	2 cut(s)	205, 853
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	5 cut(s)	80, 284, 422, 547, 708
Csp6I	GTAC	1 cut(s)	32
CspCI	CAANNNNNGTGG	2 cut(s)	138, 173
CviAII	CATG	5 cut(s)	10, 50, 206, 369, 854
CviQI	GTAC	1 cut(s)	32
DpnI	GATC	5 cut(s)	168, 852, 897, 935, 980
DpnII	GATC	5 cut(s)	166, 850, 895, 933, 978
Eam1104I	CTCTTC	2 cut(s)	120, 339
EarI	CTCTTC	2 cut(s)	120, 339
Eco130I	CCWWGG	3 cut(s)	387, 805, 970
Eco47I	GGWCC	3 cut(s)	80, 422, 708
Eco57I	CTGAAG	2 cut(s)	457, 628
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoO109I	RGGNCCY	1 cut(s)	547
EcoRII	CCWGG	1 cut(s)	339
EcoT14I	CCWWGG	3 cut(s)	387, 805, 970
EcoT22I	ATGCAT	1 cut(s)	235
ErhI	CCWWGG	3 cut(s)	387, 805, 970
FaeI	CATG	5 cut(s)	13, 53, 209, 372, 857
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	1 cut(s)	746
FatI	CATG	5 cut(s)	9, 49, 205, 368, 853
FauI	CCCGC	1 cut(s)	505
FauNDI	CATATG	1 cut(s)	713
FbaI	TGATCA	2 cut(s)	895, 933
Fnu4HI	GCNGC	2 cut(s)	180, 393
FokI	GGATG	3 cut(s)	31, 86, 479
Fsp4HI	GCNGC	2 cut(s)	180, 393
FspBI	CTAG	5 cut(s)	293, 383, 443, 515, 1009
GluI	GCNGC	2 cut(s)	180, 393
HaeIII	GGCC	2 cut(s)	285, 549
HapII	CCGG	1 cut(s)	282
Hin1II	CATG	5 cut(s)	13, 53, 209, 372, 857
HindIII	AAGCTT	2 cut(s)	469, 902
HinfI	GANTC	2 cut(s)	296, 455
HpaII	CCGG	1 cut(s)	282
HphI	GGTGA	1 cut(s)	329
Hpy166II	GTNNAC	2 cut(s)	422, 640
Hpy188I	TCNGA	5 cut(s)	620, 647, 762, 829, 895
Hpy188III	TCNNGA	8 cut(s)	25, 92, 206, 398, 515, 854, 937, 982
Hpy8I	GTNNAC	2 cut(s)	422, 640
HpyAV	CCTTC	2 cut(s)	200, 591
HpyCH4III	ACNGT	2 cut(s)	364, 708
HpyCH4V	TGCA	4 cut(s)	149, 199, 233, 410
HpyF10VI	GCNNNNNNNGC	3 cut(s)	258, 392, 401
Hsp92II	CATG	5 cut(s)	13, 53, 209, 372, 857
KroI	GCCGGC	1 cut(s)	281
KroNI	GCCGGC	1 cut(s)	283
Ksp22I	TGATCA	2 cut(s)	895, 933
Kzo9I	GATC	5 cut(s)	166, 850, 895, 933, 978
LmnI	GCTCC	1 cut(s)	505
Lsp1109I	GCAGC	1 cut(s)	379
LweI	GCATC	3 cut(s)	220, 242, 391
MaeI	CTAG	5 cut(s)	293, 383, 443, 515, 1009
MaeIII	GTNAC	1 cut(s)	841
MalI	GATC	5 cut(s)	168, 852, 897, 935, 980
MbiI	CCGCTC	1 cut(s)	500
MboI	GATC	5 cut(s)	166, 850, 895, 933, 978
MboII	GAAGA	3 cut(s)	137, 356, 708
MfeI	CAATTG	1 cut(s)	150
MflI	RGATCY	1 cut(s)	166
MhlI	GDGCHC	1 cut(s)	116
MluCI	AATT	5 cut(s)	150, 505, 532, 659, 740
MlyI	GAGTC	1 cut(s)	449
MmeI	TCCRAC	1 cut(s)	380
Mph1103I	ATGCAT	1 cut(s)	235
MroNI	GCCGGC	1 cut(s)	281
MseI	TTAA	2 cut(s)	611, 795
MslI	CAYNNNNRTG	1 cut(s)	204
MspI	CCGG	1 cut(s)	282
MspR9I	CCNGG	1 cut(s)	341
MunI	CAATTG	1 cut(s)	150
Mva1269I	GAATGC	1 cut(s)	705
MvaI	CCWGG	1 cut(s)	341
MvnI	CGCG	1 cut(s)	399
MwoI	GCNNNNNNNGC	3 cut(s)	258, 392, 401
NaeI	GCCGGC	1 cut(s)	283
NdeI	CATATG	1 cut(s)	713
NdeII	GATC	5 cut(s)	166, 850, 895, 933, 978
NgoMIV	GCCGGC	1 cut(s)	281
NlaIII	CATG	5 cut(s)	13, 53, 209, 372, 857
NlaIV	GGNNCC	1 cut(s)	481
NmuCI	GTSAC	1 cut(s)	841
NruI	TCGCGA	1 cut(s)	399
NsiI	ATGCAT	1 cut(s)	235
NspV	TTCGAA	1 cut(s)	694
PagI	TCATGA	2 cut(s)	205, 853
PaqCI	CACCTGC	1 cut(s)	865
PcsI	WCGNNNNNNNCGW	1 cut(s)	663
PctI	GAATGC	1 cut(s)	705
PdiI	GCCGGC	1 cut(s)	283
PfeI	GAWTC	1 cut(s)	296
PflMI	CCANNNNNTGG	1 cut(s)	592
PkrI	GCNGC	2 cut(s)	181, 394
PleI	GAGTC	1 cut(s)	449
PpsI	GAGTC	1 cut(s)	449
Psp6I	CCWGG	1 cut(s)	339
PspGI	CCWGG	1 cut(s)	339
PspN4I	GGNNCC	1 cut(s)	481
PspPI	GGNCC	5 cut(s)	80, 284, 422, 547, 708
PsuI	RGATCY	1 cut(s)	166
RruI	TCGCGA	1 cut(s)	399
RsaI	GTAC	1 cut(s)	33
RsaNI	GTAC	1 cut(s)	32
RseI	CAYNNNNRTG	1 cut(s)	204
SaqAI	TTAA	2 cut(s)	611, 795
SatI	GCNGC	2 cut(s)	180, 393
Sau3AI	GATC	5 cut(s)	166, 850, 895, 933, 978
Sau96I	GGNCC	5 cut(s)	80, 284, 422, 547, 708
ScaI	AGTACT	1 cut(s)	33
SchI	GAGTC	1 cut(s)	449
ScrFI	CCNGG	1 cut(s)	341
SduI	GDGCHC	1 cut(s)	116
SfaNI	GCATC	3 cut(s)	220, 242, 391
SfuI	TTCGAA	1 cut(s)	694
SinI	GGWCC	3 cut(s)	80, 422, 708
SmiMI	CAYNNNNRTG	1 cut(s)	204
Sse9I	AATT	5 cut(s)	150, 505, 532, 659, 740
SsiI	CCGC	4 cut(s)	155, 179, 498, 749
SspMI	CTAG	5 cut(s)	293, 383, 443, 515, 1009
StyD4I	CCNGG	1 cut(s)	339
StyI	CCWWGG	3 cut(s)	387, 805, 970
TaaI	ACNGT	2 cut(s)	364, 708
TaqI	TCGA	3 cut(s)	172, 321, 694
TasI	AATT	5 cut(s)	150, 505, 532, 659, 740
TatI	WGTACW	1 cut(s)	31
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	296
Tru1I	TTAA	2 cut(s)	611, 795
Tru9I	TTAA	2 cut(s)	611, 795
TscAI	CASTG	5 cut(s)	61, 274, 465, 481, 936
TseFI	GTSAC	1 cut(s)	841
TseI	GCWGC	1 cut(s)	392
Tsp45I	GTSAC	1 cut(s)	841
TspDTI	ATGAA	6 cut(s)	38, 194, 357, 481, 753, 906
TspRI	CASTG	5 cut(s)	61, 274, 465, 481, 936
Van91I	CCANNNNNTGG	1 cut(s)	592
VpaK11BI	GGWCC	3 cut(s)	80, 422, 708
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	1 cut(s)	505
XbaI	TCTAGA	1 cut(s)	514
XspI	CTAG	5 cut(s)	293, 383, 443, 515, 1009
ZrmI	AGTACT	1 cut(s)	33
Zsp2I	ATGCAT	1 cut(s)	235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.