Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NADPH_Ox | PF08414 | 62 - 149 | 2.3e-24 | Respiratory burst NADPH oxidase |
| Ferric_reduct | PF01794 | 324 - 468 | 6.1e-10 | Ferric reductase like transmembrane component |
| FAD_binding_8 | PF08022 | 513 - 644 | 1e-27 | FAD-binding domain |
| NAD_binding_6 | PF08030 | 650 - 829 | 9.5e-48 | Ferric reductase NAD binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1265 |
| Acc36I | ACCTGC | 1 cut(s) | 311 |
| AccB1I | GGYRCC | 1 cut(s) | 82 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1381 |
| AccI | GTMKAC | 2 cut(s) | 1102, 2262 |
| AciI | CCGC | 1 cut(s) | 877 |
| AclI | AACGTT | 1 cut(s) | 1501 |
| AclWI | GGATC | 5 cut(s) | 62, 611, 1030, 1224, 1443 |
| AcsI | RAATTY | 6 cut(s) | 410, 773, 1657, 2492, 2503, 2536 |
| AcuI | CTGAAG | 1 cut(s) | 446 |
| AcyI | GRCGYC | 2 cut(s) | 2193, 2436 |
| AfaI | GTAC | 7 cut(s) | 884, 1445, 1586, 1613, 1628, 1792, 2304 |
| AfeI | AGCGCT | 1 cut(s) | 251 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 456, 1381, 1729, 2181 |
| AflIII | ACRYGT | 3 cut(s) | 477, 796, 1629 |
| AhlI | ACTAGT | 1 cut(s) | 1832 |
| AjnI | CCWGG | 2 cut(s) | 1234, 1600 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1129, 1161 |
| Alw21I | GWGCWC | 3 cut(s) | 1729, 1752, 2484 |
| Alw26I | GTCTC | 5 cut(s) | 941, 1543, 1728, 2347, 2430 |
| AlwI | GGATC | 5 cut(s) | 62, 611, 1030, 1224, 1443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2311 |
| Ama87I | CYCGRG | 1 cut(s) | 1693 |
| Aor51HI | AGCGCT | 1 cut(s) | 251 |
| AoxI | GGCC | 5 cut(s) | 343, 856, 1328, 2048, 2139 |
| ApeKI | GCWGC | 6 cut(s) | 581, 593, 1201, 1780, 2408, 2411 |
| ApoI | RAATTY | 6 cut(s) | 410, 773, 1657, 2492, 2503, 2536 |
| AspLEI | GCGC | 2 cut(s) | 252, 2290 |
| AspS9I | GGNCC | 7 cut(s) | 31, 120, 300, 856, 1328, 1913, 2139 |
| AsuC2I | CCSGG | 5 cut(s) | 457, 1180, 1326, 1694, 1695 |
| AsuHPI | GGTGA | 3 cut(s) | 506, 532, 1669 |
| AsuII | TTCGAA | 1 cut(s) | 1662 |
| AvaI | CYCGRG | 1 cut(s) | 1693 |
| AvaII | GGWCC | 4 cut(s) | 31, 120, 300, 1913 |
| BanI | GGYRCC | 1 cut(s) | 82 |
| BanII | GRGCYC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| BbsI | GAAGAC | 4 cut(s) | 435, 450, 1457, 2431 |
| Bbv12I | GWGCWC | 3 cut(s) | 1729, 1752, 2484 |
| BbvI | GCAGC | 6 cut(s) | 593, 605, 1213, 1792, 2395, 2423 |
| BccI | CCATC | 5 cut(s) | 43, 386, 1322, 1688, 2232 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 906, 940 |
| BciT130I | CCWGG | 2 cut(s) | 1236, 1602 |
| BclI | TGATCA | 1 cut(s) | 600 |
| BcnI | CCSGG | 5 cut(s) | 457, 1180, 1326, 1694, 1695 |
| BcoDI | GTCTC | 5 cut(s) | 941, 1543, 1728, 2347, 2430 |
| BcuI | ACTAGT | 1 cut(s) | 1832 |
| BfaI | CTAG | 4 cut(s) | 1803, 1833, 2489, 2542 |
| BfmI | CTRYAG | 3 cut(s) | 1743, 2032, 2409 |
| BfoI | RGCGCY | 1 cut(s) | 253 |
| BfuAI | ACCTGC | 1 cut(s) | 311 |
| BglII | AGATCT | 1 cut(s) | 1013 |
| BisI | GCNGC | 6 cut(s) | 582, 594, 1202, 1781, 2409, 2412 |
| BlpI | GCTNAGC | 1 cut(s) | 2096 |
| BlsI | GCNGC | 6 cut(s) | 583, 595, 1203, 1782, 2410, 2413 |
| Bme1390I | CCNGG | 7 cut(s) | 457, 1180, 1236, 1326, 1602, 1694, 1695 |
| Bme18I | GGWCC | 4 cut(s) | 31, 120, 300, 1913 |
| BmeT110I | CYCGRG | 1 cut(s) | 1693 |
| BmgT120I | GGNCC | 7 cut(s) | 31, 120, 300, 856, 1328, 1913, 2139 |
| BmiI | GGNNCC | 9 cut(s) | 33, 84, 191, 301, 1329, 1914, 1915, 1924, 2173 |
| BmrFI | CCNGG | 7 cut(s) | 457, 1180, 1236, 1326, 1602, 1694, 1695 |
| BmrI | ACTGGG | 1 cut(s) | 1254 |
| BmsI | GCATC | 7 cut(s) | 217, 346, 593, 908, 1126, 1678, 2266 |
| BmuI | ACTGGG | 1 cut(s) | 1254 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2258 |
| BpiI | GAAGAC | 4 cut(s) | 435, 450, 1457, 2431 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1582, 1614 |
| BpmI | CTGGAG | 4 cut(s) | 832, 1218, 1584, 2115 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2096 |
| Bpu14I | TTCGAA | 1 cut(s) | 1662 |
| BpuEI | CTTGAG | 5 cut(s) | 938, 1319, 1609, 1622, 1729 |
| BpuMI | CCSGG | 5 cut(s) | 457, 1180, 1326, 1694, 1695 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1088 |
| BsaHI | GRCGYC | 2 cut(s) | 2193, 2436 |
| BsaI | GGTCTC | 1 cut(s) | 941 |
| BsaJI | CCNNGG | 6 cut(s) | 72, 628, 1325, 1692, 1693, 2298 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1216, 1246, 2113, 2143 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 456, 1381, 1729, 2181 |
| Bse1I | ACTGG | 9 cut(s) | 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521 |
| Bse3DI | GCAATG | 3 cut(s) | 684, 1173, 2001 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1088 |
| BseBI | CCWGG | 2 cut(s) | 1236, 1602 |
| BseDI | CCNNGG | 6 cut(s) | 72, 628, 1325, 1692, 1693, 2298 |
| BseGI | GGATG | 4 cut(s) | 1467, 1669, 1719, 2206 |
| BseJI | GATNNNNATC | 1 cut(s) | 1088 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 456, 1381, 1729, 2181 |
| BseMI | GCAATG | 3 cut(s) | 684, 1173, 2001 |
| BseNI | ACTGG | 9 cut(s) | 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521 |
| BseRI | GAGGAG | 5 cut(s) | 154, 385, 388, 527, 530 |
| BseXI | GCAGC | 6 cut(s) | 593, 605, 1213, 1792, 2395, 2423 |
| BseYI | CCCAGC | 1 cut(s) | 1381 |
| BsgI | GTGCAG | 1 cut(s) | 1220 |
| BshFI | GGCC | 5 cut(s) | 345, 858, 1330, 2050, 2141 |
| BshNI | GGYRCC | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1729, 1752, 2484 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1693 |
| BsiSI | CCGG | 4 cut(s) | 457, 1179, 1325, 1694 |
| BslFI | GGGAC | 4 cut(s) | 302, 313, 1108, 1926 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 456, 1381, 1729, 2181 |
| BsmAI | GTCTC | 5 cut(s) | 941, 1543, 1728, 2347, 2430 |
| BsmBI | CGTCTC | 1 cut(s) | 2430 |
| BsmFI | GGGAC | 4 cut(s) | 302, 313, 1108, 1926 |
| BsnI | GGCC | 5 cut(s) | 345, 858, 1330, 2050, 2141 |
| Bso31I | GGTCTC | 1 cut(s) | 941 |
| BsoBI | CYCGRG | 1 cut(s) | 1693 |
| Bsp119I | TTCGAA | 1 cut(s) | 1662 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| Bsp1407I | TGTACA | 1 cut(s) | 1626 |
| Bsp143I | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2096 |
| Bsp19I | CCATGG | 2 cut(s) | 72, 2298 |
| BspACI | CCGC | 1 cut(s) | 877 |
| BspANI | GGCC | 5 cut(s) | 345, 858, 1330, 2050, 2141 |
| BspHI | TCATGA | 1 cut(s) | 1876 |
| BspLI | GGNNCC | 9 cut(s) | 33, 84, 191, 301, 1329, 1914, 1915, 1924, 2173 |
| BspMAI | CTGCAG | 1 cut(s) | 2413 |
| BspMI | ACCTGC | 1 cut(s) | 311 |
| BspPI | GGATC | 5 cut(s) | 62, 611, 1030, 1224, 1443 |
| BspQI | GCTCTTC | 2 cut(s) | 603, 1406 |
| BspT104I | TTCGAA | 1 cut(s) | 1662 |
| BspT107I | GGYRCC | 1 cut(s) | 82 |
| BspTNI | GGTCTC | 1 cut(s) | 941 |
| BsrDI | GCAATG | 3 cut(s) | 684, 1173, 2001 |
| BsrGI | TGTACA | 1 cut(s) | 1626 |
| BsrI | ACTGG | 9 cut(s) | 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521 |
| BssECI | CCNNGG | 6 cut(s) | 72, 628, 1325, 1692, 1693, 2298 |
| BssMI | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| BssNAI | GTATAC | 1 cut(s) | 1103 |
| BssNI | GRCGYC | 2 cut(s) | 2193, 2436 |
| BssT1I | CCWWGG | 2 cut(s) | 72, 2298 |
| Bst1107I | GTATAC | 1 cut(s) | 1103 |
| Bst2UI | CCWGG | 2 cut(s) | 1236, 1602 |
| Bst4CI | ACNGT | 8 cut(s) | 351, 494, 1006, 1415, 1584, 2024, 2092, 2283 |
| Bst6I | CTCTTC | 2 cut(s) | 603, 1406 |
| BstACI | GRCGYC | 2 cut(s) | 2193, 2436 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 590, 2285 |
| BstAUI | TGTACA | 1 cut(s) | 1626 |
| BstBI | TTCGAA | 1 cut(s) | 1662 |
| BstC8I | GCNNGC | 3 cut(s) | 343, 579, 1778 |
| BstDSI | CCRYGG | 2 cut(s) | 72, 2298 |
| BstF5I | GGATG | 4 cut(s) | 1467, 1669, 1719, 2206 |
| BstH2I | RGCGCY | 1 cut(s) | 253 |
| BstHHI | GCGC | 2 cut(s) | 252, 2290 |
| BstKTI | GATC | 9 cut(s) | 70, 603, 619, 1016, 1038, 1219, 1438, 1651, 1876 |
| BstMAI | GTCTC | 5 cut(s) | 941, 1543, 1728, 2347, 2430 |
| BstMBI | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 590, 2285 |
| BstNI | CCWGG | 2 cut(s) | 1236, 1602 |
| BstNSI | RCATGY | 4 cut(s) | 481, 800, 1633, 2321 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2258 |
| BstSCI | CCNGG | 7 cut(s) | 455, 1178, 1234, 1324, 1600, 1692, 1693 |
| BstSFI | CTRYAG | 3 cut(s) | 1743, 2032, 2409 |
| BstV1I | GCAGC | 6 cut(s) | 593, 605, 1213, 1792, 2395, 2423 |
| BstV2I | GAAGAC | 4 cut(s) | 435, 450, 1457, 2431 |
| BstX2I | RGATCY | 2 cut(s) | 1013, 1216 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 42 |
| BstYI | RGATCY | 2 cut(s) | 1013, 1216 |
| BstZ17I | GTATAC | 1 cut(s) | 1103 |
| BsuRI | GGCC | 5 cut(s) | 345, 858, 1330, 2050, 2141 |
| BtgI | CCRYGG | 2 cut(s) | 72, 2298 |
| BtsCI | GGATG | 4 cut(s) | 1467, 1669, 1719, 2206 |
| BtsI | GCAGTG | 3 cut(s) | 105, 136, 2074 |
| BtsIMutI | CAGTG | 5 cut(s) | 105, 136, 1580, 2074, 2459 |
| BveI | ACCTGC | 1 cut(s) | 311 |
| Cac8I | GCNNGC | 3 cut(s) | 343, 579, 1778 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2311 |
| CciI | TCATGA | 1 cut(s) | 1876 |
| CfoI | GCGC | 2 cut(s) | 252, 2290 |
| Cfr13I | GGNCC | 7 cut(s) | 31, 120, 300, 856, 1328, 1913, 2139 |
| Cfr9I | CCCGGG | 1 cut(s) | 1693 |
| CseI | GACGC | 3 cut(s) | 2182, 2248, 2425 |
| Csp6I | GTAC | 7 cut(s) | 883, 1444, 1585, 1612, 1627, 1791, 2303 |
| CviQI | GTAC | 7 cut(s) | 883, 1444, 1585, 1612, 1627, 1791, 2303 |
| DpnI | GATC | 9 cut(s) | 69, 602, 618, 1015, 1037, 1218, 1437, 1650, 1875 |
| DpnII | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| DraI | TTTAAA | 1 cut(s) | 2188 |
| Eam1104I | CTCTTC | 2 cut(s) | 603, 1406 |
| EarI | CTCTTC | 2 cut(s) | 603, 1406 |
| Ecl136II | GAGCTC | 3 cut(s) | 1727, 1750, 2482 |
| Eco130I | CCWWGG | 2 cut(s) | 72, 2298 |
| Eco147I | AGGCCT | 1 cut(s) | 2050 |
| Eco24I | GRGCYC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| Eco31I | GGTCTC | 1 cut(s) | 941 |
| Eco32I | GATATC | 1 cut(s) | 2014 |
| Eco47I | GGWCC | 4 cut(s) | 31, 120, 300, 1913 |
| Eco47III | AGCGCT | 1 cut(s) | 251 |
| Eco53kI | GAGCTC | 3 cut(s) | 1727, 1750, 2482 |
| Eco57I | CTGAAG | 1 cut(s) | 446 |
| Eco88I | CYCGRG | 1 cut(s) | 1693 |
| EcoICRI | GAGCTC | 3 cut(s) | 1727, 1750, 2482 |
| EcoO109I | RGGNCCY | 5 cut(s) | 31, 300, 1328, 1913, 2139 |
| EcoRI | GAATTC | 1 cut(s) | 410 |
| EcoRII | CCWGG | 2 cut(s) | 1234, 1600 |
| EcoRV | GATATC | 1 cut(s) | 2014 |
| EcoT14I | CCWWGG | 2 cut(s) | 72, 2298 |
| EcoT22I | ATGCAT | 3 cut(s) | 232, 361, 1119 |
| EcoT38I | GRGCYC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| ErhI | CCWWGG | 2 cut(s) | 72, 2298 |
| Esp3I | CGTCTC | 1 cut(s) | 2430 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 444, 476, 1800, 1832, 1901, 1933 |
| FaqI | GGGAC | 4 cut(s) | 302, 313, 1108, 1926 |
| FauNDI | CATATG | 1 cut(s) | 589 |
| FbaI | TGATCA | 1 cut(s) | 600 |
| FblI | GTMKAC | 2 cut(s) | 1102, 2262 |
| Fnu4HI | GCNGC | 6 cut(s) | 582, 594, 1202, 1781, 2409, 2412 |
| FokI | GGATG | 4 cut(s) | 1474, 1656, 1706, 2213 |
| FriOI | GRGCYC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| Fsp4HI | GCNGC | 6 cut(s) | 582, 594, 1202, 1781, 2409, 2412 |
| FspBI | CTAG | 4 cut(s) | 1803, 1833, 2489, 2542 |
| GlaI | GCGC | 2 cut(s) | 251, 2289 |
| GluI | GCNGC | 6 cut(s) | 582, 594, 1202, 1781, 2409, 2412 |
| GsaI | CCCAGC | 1 cut(s) | 1385 |
| GsuI | CTGGAG | 4 cut(s) | 832, 1218, 1584, 2115 |
| HaeII | RGCGCY | 1 cut(s) | 253 |
| HaeIII | GGCC | 5 cut(s) | 345, 858, 1330, 2050, 2141 |
| HapII | CCGG | 4 cut(s) | 457, 1179, 1325, 1694 |
| HgaI | GACGC | 3 cut(s) | 2182, 2248, 2425 |
| HhaI | GCGC | 2 cut(s) | 252, 2290 |
| Hin1I | GRCGYC | 2 cut(s) | 2193, 2436 |
| Hin6I | GCGC | 2 cut(s) | 250, 2288 |
| HinP1I | GCGC | 2 cut(s) | 250, 2288 |
| HincII | GTYRAC | 1 cut(s) | 2157 |
| HindII | GTYRAC | 1 cut(s) | 2157 |
| HindIII | AAGCTT | 1 cut(s) | 2080 |
| HpaI | GTTAAC | 1 cut(s) | 2157 |
| HpaII | CCGG | 4 cut(s) | 457, 1179, 1325, 1694 |
| HphI | GGTGA | 3 cut(s) | 506, 532, 1669 |
| Hpy166II | GTNNAC | 7 cut(s) | 320, 388, 850, 1103, 1717, 2157, 2263 |
| Hpy8I | GTNNAC | 7 cut(s) | 320, 388, 850, 1103, 1717, 2157, 2263 |
| HpyAV | CCTTC | 8 cut(s) | 14, 174, 211, 325, 1288, 1369, 1856, 2264 |
| HpyCH4III | ACNGT | 8 cut(s) | 351, 494, 1006, 1415, 1584, 2024, 2092, 2283 |
| HpyCH4IV | ACGT | 2 cut(s) | 852, 1501 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 590, 2285 |
| HpySE526I | ACGT | 2 cut(s) | 852, 1501 |
| Hsp92I | GRCGYC | 2 cut(s) | 2193, 2436 |
| HspAI | GCGC | 2 cut(s) | 250, 2288 |
| KflI | GGGWCCC | 1 cut(s) | 1913 |
| Ksp22I | TGATCA | 1 cut(s) | 600 |
| KspAI | GTTAAC | 1 cut(s) | 2157 |
| Kzo9I | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| LguI | GCTCTTC | 2 cut(s) | 603, 1406 |
| LmnI | GCTCC | 4 cut(s) | 189, 1922, 1982, 2479 |
| Lsp1109I | GCAGC | 6 cut(s) | 593, 605, 1213, 1792, 2395, 2423 |
| LweI | GCATC | 7 cut(s) | 217, 346, 593, 908, 1126, 1678, 2266 |
| MaeI | CTAG | 4 cut(s) | 1803, 1833, 2489, 2542 |
| MaeII | ACGT | 2 cut(s) | 852, 1501 |
| MaeIII | GTNAC | 7 cut(s) | 482, 494, 520, 1028, 1208, 1222, 1507 |
| MalI | GATC | 9 cut(s) | 69, 602, 618, 1015, 1037, 1218, 1437, 1650, 1875 |
| MboI | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| MflI | RGATCY | 2 cut(s) | 1013, 1216 |
| MhlI | GDGCHC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| MlyI | GAGTC | 3 cut(s) | 440, 2063, 2122 |
| MmeI | TCCRAC | 3 cut(s) | 489, 2333, 2480 |
| Mph1103I | ATGCAT | 3 cut(s) | 232, 361, 1119 |
| MslI | CAYNNNNRTG | 3 cut(s) | 40, 311, 2067 |
| MspI | CCGG | 4 cut(s) | 457, 1179, 1325, 1694 |
| MspR9I | CCNGG | 7 cut(s) | 457, 1180, 1236, 1326, 1602, 1694, 1695 |
| MvaI | CCWGG | 2 cut(s) | 1236, 1602 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 590, 2285 |
| NciI | CCSGG | 5 cut(s) | 457, 1180, 1326, 1694, 1695 |
| NcoI | CCATGG | 2 cut(s) | 72, 2298 |
| NdeI | CATATG | 1 cut(s) | 589 |
| NdeII | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| NlaIV | GGNNCC | 9 cut(s) | 33, 84, 191, 301, 1329, 1914, 1915, 1924, 2173 |
| NmuCI | GTSAC | 4 cut(s) | 482, 494, 520, 1507 |
| NsiI | ATGCAT | 3 cut(s) | 232, 361, 1119 |
| NspI | RCATGY | 4 cut(s) | 481, 800, 1633, 2321 |
| NspV | TTCGAA | 1 cut(s) | 1662 |
| PagI | TCATGA | 1 cut(s) | 1876 |
| PceI | AGGCCT | 1 cut(s) | 2050 |
| PciI | ACATGT | 3 cut(s) | 477, 796, 1629 |
| PciSI | GCTCTTC | 2 cut(s) | 603, 1406 |
| PfeI | GAWTC | 7 cut(s) | 221, 326, 742, 760, 1110, 1605, 2517 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1381 |
| PfoI | TCCNGGA | 1 cut(s) | 1600 |
| PkrI | GCNGC | 6 cut(s) | 583, 595, 1203, 1782, 2410, 2413 |
| PleI | GAGTC | 3 cut(s) | 440, 2062, 2122 |
| PpsI | GAGTC | 3 cut(s) | 440, 2062, 2122 |
| PpuMI | RGGWCCY | 3 cut(s) | 31, 300, 1913 |
| PscI | ACATGT | 3 cut(s) | 477, 796, 1629 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2258 |
| PsiI | TTATAA | 1 cut(s) | 1265 |
| Psp124BI | GAGCTC | 3 cut(s) | 1729, 1752, 2484 |
| Psp1406I | AACGTT | 1 cut(s) | 1501 |
| Psp5II | RGGWCCY | 3 cut(s) | 31, 300, 1913 |
| Psp6I | CCWGG | 2 cut(s) | 1234, 1600 |
| PspFI | CCCAGC | 1 cut(s) | 1381 |
| PspGI | CCWGG | 2 cut(s) | 1234, 1600 |
| PspN4I | GGNNCC | 9 cut(s) | 33, 84, 191, 301, 1329, 1914, 1915, 1924, 2173 |
| PspPI | GGNCC | 7 cut(s) | 31, 120, 300, 856, 1328, 1913, 2139 |
| PspPPI | RGGWCCY | 3 cut(s) | 31, 300, 1913 |
| PstI | CTGCAG | 1 cut(s) | 2413 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2311 |
| PsuI | RGATCY | 2 cut(s) | 1013, 1216 |
| RsaI | GTAC | 7 cut(s) | 884, 1445, 1586, 1613, 1628, 1792, 2304 |
| RsaNI | GTAC | 7 cut(s) | 883, 1444, 1585, 1612, 1627, 1791, 2303 |
| RseI | CAYNNNNRTG | 3 cut(s) | 40, 311, 2067 |
| SacI | GAGCTC | 3 cut(s) | 1729, 1752, 2484 |
| SapI | GCTCTTC | 2 cut(s) | 603, 1406 |
| SatI | GCNGC | 6 cut(s) | 582, 594, 1202, 1781, 2409, 2412 |
| Sau3AI | GATC | 9 cut(s) | 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873 |
| Sau96I | GGNCC | 7 cut(s) | 31, 120, 300, 856, 1328, 1913, 2139 |
| SchI | GAGTC | 3 cut(s) | 440, 2063, 2122 |
| ScrFI | CCNGG | 7 cut(s) | 457, 1180, 1236, 1326, 1602, 1694, 1695 |
| SduI | GDGCHC | 4 cut(s) | 1729, 1752, 1927, 2484 |
| SfaNI | GCATC | 7 cut(s) | 217, 346, 593, 908, 1126, 1678, 2266 |
| SfcI | CTRYAG | 3 cut(s) | 1743, 2032, 2409 |
| SfuI | TTCGAA | 1 cut(s) | 1662 |
| SinI | GGWCC | 4 cut(s) | 31, 120, 300, 1913 |
| SmaI | CCCGGG | 1 cut(s) | 1695 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 40, 311, 2067 |
| SmlI | CTYRAG | 5 cut(s) | 953, 1334, 1588, 1637, 1708 |
| SmoI | CTYRAG | 5 cut(s) | 953, 1334, 1588, 1637, 1708 |
| SpeI | ACTAGT | 1 cut(s) | 1832 |
| SseBI | AGGCCT | 1 cut(s) | 2050 |
| SsiI | CCGC | 1 cut(s) | 877 |
| SspI | AATATT | 2 cut(s) | 1428, 1526 |
| SspMI | CTAG | 4 cut(s) | 1803, 1833, 2489, 2542 |
| SstI | GAGCTC | 3 cut(s) | 1729, 1752, 2484 |
| StuI | AGGCCT | 1 cut(s) | 2050 |
| StyD4I | CCNGG | 7 cut(s) | 455, 1178, 1234, 1324, 1600, 1692, 1693 |
| StyI | CCWWGG | 2 cut(s) | 72, 2298 |
| TaaI | ACNGT | 8 cut(s) | 351, 494, 1006, 1415, 1584, 2024, 2092, 2283 |
| TaiI | ACGT | 2 cut(s) | 855, 1504 |
| TaqI | TCGA | 6 cut(s) | 60, 329, 916, 1662, 2334, 2428 |
| TatI | WGTACW | 3 cut(s) | 1584, 1626, 1790 |
| TfiI | GAWTC | 7 cut(s) | 221, 326, 742, 760, 1110, 1605, 2517 |
| TscAI | CASTG | 5 cut(s) | 112, 136, 1587, 2074, 2466 |
| TseFI | GTSAC | 4 cut(s) | 482, 494, 520, 1507 |
| TseI | GCWGC | 6 cut(s) | 581, 593, 1201, 1780, 2408, 2411 |
| Tsp45I | GTSAC | 4 cut(s) | 482, 494, 520, 1507 |
| TspDTI | ATGAA | 8 cut(s) | 17, 33, 456, 1137, 1393, 1893, 1984, 2496 |
| TspGWI | ACGGA | 2 cut(s) | 539, 885 |
| TspMI | CCCGGG | 1 cut(s) | 1693 |
| TspRI | CASTG | 5 cut(s) | 112, 136, 1587, 2074, 2466 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1381 |
| VpaK11BI | GGWCC | 4 cut(s) | 31, 120, 300, 1913 |
| XapI | RAATTY | 6 cut(s) | 410, 773, 1657, 2492, 2503, 2536 |
| XceI | RCATGY | 4 cut(s) | 481, 800, 1633, 2321 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 556 |
| XmaI | CCCGGG | 1 cut(s) | 1693 |
| XmiI | GTMKAC | 2 cut(s) | 1102, 2262 |
| XspI | CTAG | 4 cut(s) | 1803, 1833, 2489, 2542 |
| Zsp2I | ATGCAT | 3 cut(s) | 232, 361, 1119 |