Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box-like | PF12937 | 40 - 86 | 2e-09 | F-box-like |
| F-box | PF00646 | 40 - 80 | 5.1e-06 | F-box domain |
| ARM_ARMC5 | PF24768 | 495 - 756 | 1.1e-20 | ARMC5 |
| Arm | PF00514 | 501 - 542 | 1.8e-06 | Armadillo/beta-catenin-like repeat |
| Arm | PF00514 | 544 - 584 | 2.4e-06 | Armadillo/beta-catenin-like repeat |
| Arm | PF00514 | 592 - 628 | 4.7e-09 | Armadillo/beta-catenin-like repeat |
| Arm | PF00514 | 675 - 713 | 1.7e-06 | Armadillo/beta-catenin-like repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1649, 2108 |
| Acc16I | TGCGCA | 1 cut(s) | 1088 |
| Acc36I | ACCTGC | 2 cut(s) | 1649, 2108 |
| AccII | CGCG | 2 cut(s) | 258, 260 |
| AciI | CCGC | 7 cut(s) | 345, 731, 1262, 1321, 1919, 2656, 2661 |
| AclI | AACGTT | 1 cut(s) | 651 |
| AclWI | GGATC | 3 cut(s) | 258, 503, 2387 |
| AcsI | RAATTY | 5 cut(s) | 376, 616, 1360, 1615, 1700 |
| AcuI | CTGAAG | 8 cut(s) | 350, 860, 1316, 1419, 1479, 2043, 2109, 2378 |
| AfaI | GTAC | 3 cut(s) | 101, 357, 2258 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1192, 1735, 1841 |
| AflII | CTTAAG | 1 cut(s) | 314 |
| AflIII | ACRYGT | 1 cut(s) | 2259 |
| AjiI | CACGTC | 1 cut(s) | 1053 |
| AjnI | CCWGG | 2 cut(s) | 1185, 2590 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 983, 1015 |
| AleI | CACNNNNGTG | 1 cut(s) | 1509 |
| Alw21I | GWGCWC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| Alw26I | GTCTC | 5 cut(s) | 776, 873, 1077, 2023, 2363 |
| Alw44I | GTGCAC | 1 cut(s) | 1605 |
| AlwI | GGATC | 3 cut(s) | 258, 503, 2387 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 838, 1343, 2021, 2432, 2669, 2678 |
| Ama87I | CYCGRG | 2 cut(s) | 866, 1972 |
| AoxI | GGCC | 3 cut(s) | 476, 1932, 2658 |
| ApaLI | GTGCAC | 1 cut(s) | 1605 |
| ApoI | RAATTY | 5 cut(s) | 376, 616, 1360, 1615, 1700 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 872, 904 |
| AseI | ATTAAT | 1 cut(s) | 591 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1329 |
| AspLEI | GCGC | 4 cut(s) | 260, 262, 1089, 1868 |
| AspS9I | GGNCC | 4 cut(s) | 175, 476, 1566, 2658 |
| AsuC2I | CCSGG | 4 cut(s) | 179, 1973, 1974, 2148 |
| AsuHPI | GGTGA | 2 cut(s) | 1589, 2726 |
| AsuNHI | GCTAGC | 1 cut(s) | 1241 |
| AvaI | CYCGRG | 2 cut(s) | 866, 1972 |
| AvaII | GGWCC | 2 cut(s) | 175, 1566 |
| BaeGI | GKGCMC | 1 cut(s) | 1609 |
| BanII | GRGCYC | 2 cut(s) | 1172, 2464 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 348, 380 |
| BauI | CACGAG | 1 cut(s) | 449 |
| BbsI | GAAGAC | 2 cut(s) | 1286, 1970 |
| Bbv12I | GWGCWC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| BccI | CCATC | 9 cut(s) | 655, 1274, 1523, 1574, 2261, 2330, 2344, 2545, 2755 |
| BceAI | ACGGC | 1 cut(s) | 503 |
| BciT130I | CCWGG | 2 cut(s) | 1187, 2592 |
| BcnI | CCSGG | 4 cut(s) | 179, 1973, 1974, 2148 |
| BcoDI | GTCTC | 5 cut(s) | 776, 873, 1077, 2023, 2363 |
| BfaI | CTAG | 5 cut(s) | 188, 953, 1242, 1307, 2343 |
| BfmI | CTRYAG | 8 cut(s) | 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670 |
| BfrI | CTTAAG | 1 cut(s) | 314 |
| BfuAI | ACCTGC | 2 cut(s) | 1649, 2108 |
| BglII | AGATCT | 1 cut(s) | 1313 |
| Bme1390I | CCNGG | 6 cut(s) | 179, 1187, 1973, 1974, 2148, 2592 |
| Bme18I | GGWCC | 2 cut(s) | 175, 1566 |
| BmeT110I | CYCGRG | 2 cut(s) | 866, 1972 |
| BmgBI | CACGTC | 1 cut(s) | 1053 |
| BmgT120I | GGNCC | 4 cut(s) | 175, 476, 1566, 2658 |
| BmiI | GGNNCC | 2 cut(s) | 176, 2745 |
| BmrFI | CCNGG | 6 cut(s) | 179, 1187, 1973, 1974, 2148, 2592 |
| BmtI | GCTAGC | 1 cut(s) | 1245 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2375 |
| BpiI | GAAGAC | 2 cut(s) | 1286, 1970 |
| BpmI | CTGGAG | 3 cut(s) | 452, 1491, 2561 |
| Bpu10I | CCTNAGC | 1 cut(s) | 323 |
| BpuEI | CTTGAG | 4 cut(s) | 1079, 1115, 2534, 2747 |
| BpuMI | CCSGG | 4 cut(s) | 179, 1973, 1974, 2148 |
| Bsa29I | ATCGAT | 2 cut(s) | 1248, 1413 |
| BsaAI | YACGTR | 1 cut(s) | 383 |
| BsaI | GGTCTC | 2 cut(s) | 776, 2363 |
| BsaJI | CCNNGG | 5 cut(s) | 279, 1935, 1971, 1972, 2289 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1281, 1311, 1816, 1846, 2046, 2076 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1192, 1735, 1841 |
| Bse118I | RCCGGY | 1 cut(s) | 1526 |
| Bse1I | ACTGG | 4 cut(s) | 127, 772, 1614, 2578 |
| Bse3DI | GCAATG | 3 cut(s) | 607, 1089, 2034 |
| BseBI | CCWGG | 2 cut(s) | 1187, 2592 |
| BseCI | ATCGAT | 2 cut(s) | 1248, 1413 |
| BseDI | CCNNGG | 5 cut(s) | 279, 1935, 1971, 1972, 2289 |
| BseGI | GGATG | 6 cut(s) | 577, 1045, 1123, 1186, 2284, 2355 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1192, 1735, 1841 |
| BseMI | GCAATG | 3 cut(s) | 607, 1089, 2034 |
| BseMII | CTCAG | 3 cut(s) | 60, 1029, 2500 |
| BseNI | ACTGG | 4 cut(s) | 127, 772, 1614, 2578 |
| BsePI | GCGCGC | 1 cut(s) | 258 |
| BseRI | GAGGAG | 3 cut(s) | 1824, 2652, 2673 |
| BseSI | GKGCMC | 1 cut(s) | 1609 |
| BsgI | GTGCAG | 2 cut(s) | 1617, 2172 |
| Bsh1236I | CGCG | 2 cut(s) | 258, 260 |
| BshFI | GGCC | 3 cut(s) | 478, 1934, 2660 |
| BshVI | ATCGAT | 2 cut(s) | 1248, 1413 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| BsiHKCI | CYCGRG | 2 cut(s) | 866, 1972 |
| BsiSI | CCGG | 4 cut(s) | 178, 1527, 1973, 2147 |
| BslFI | GGGAC | 4 cut(s) | 188, 721, 849, 1800 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1192, 1735, 1841 |
| BsmAI | GTCTC | 5 cut(s) | 776, 873, 1077, 2023, 2363 |
| BsmFI | GGGAC | 4 cut(s) | 188, 721, 849, 1800 |
| BsmI | GAATGC | 2 cut(s) | 1378, 2466 |
| BsnI | GGCC | 3 cut(s) | 478, 1934, 2660 |
| Bso31I | GGTCTC | 2 cut(s) | 776, 2363 |
| BsoBI | CYCGRG | 2 cut(s) | 866, 1972 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| Bsp1407I | TGTACA | 1 cut(s) | 99 |
| Bsp143I | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| Bsp19I | CCATGG | 1 cut(s) | 279 |
| BspACI | CCGC | 7 cut(s) | 345, 731, 1262, 1321, 1919, 2656, 2661 |
| BspANI | GGCC | 3 cut(s) | 478, 1934, 2660 |
| BspCNI | CTCAG | 3 cut(s) | 61, 1028, 2499 |
| BspDI | ATCGAT | 2 cut(s) | 1248, 1413 |
| BspFNI | CGCG | 2 cut(s) | 258, 260 |
| BspHI | TCATGA | 1 cut(s) | 1837 |
| BspLI | GGNNCC | 2 cut(s) | 176, 2745 |
| BspMAI | CTGCAG | 6 cut(s) | 407, 1783, 1918, 2119, 2437, 2674 |
| BspMI | ACCTGC | 2 cut(s) | 1649, 2108 |
| BspOI | GCTAGC | 1 cut(s) | 1245 |
| BspPI | GGATC | 3 cut(s) | 258, 503, 2387 |
| BspQI | GCTCTTC | 1 cut(s) | 2577 |
| BspTI | CTTAAG | 1 cut(s) | 314 |
| BspTNI | GGTCTC | 2 cut(s) | 776, 2363 |
| BsrDI | GCAATG | 3 cut(s) | 607, 1089, 2034 |
| BsrFI | RCCGGY | 1 cut(s) | 1526 |
| BsrGI | TGTACA | 1 cut(s) | 99 |
| BsrI | ACTGG | 4 cut(s) | 127, 772, 1614, 2578 |
| BssAI | RCCGGY | 1 cut(s) | 1526 |
| BssECI | CCNNGG | 5 cut(s) | 279, 1935, 1971, 1972, 2289 |
| BssHII | GCGCGC | 1 cut(s) | 258 |
| BssMI | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| BssSI | CACGAG | 1 cut(s) | 449 |
| BssT1I | CCWWGG | 3 cut(s) | 279, 1935, 2289 |
| Bst2BI | CACGAG | 1 cut(s) | 449 |
| Bst2UI | CCWGG | 2 cut(s) | 1187, 2592 |
| Bst4CI | ACNGT | 2 cut(s) | 142, 644 |
| Bst6I | CTCTTC | 2 cut(s) | 1455, 2577 |
| BstAFI | CTTAAG | 1 cut(s) | 314 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 754, 1604, 1913, 2608, 2669, 2678 |
| BstAUI | TGTACA | 1 cut(s) | 99 |
| BstBAI | YACGTR | 1 cut(s) | 383 |
| BstDEI | CTNAG | 6 cut(s) | 69, 323, 603, 1015, 2332, 2486 |
| BstDSI | CCRYGG | 1 cut(s) | 279 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| BstF5I | GGATG | 6 cut(s) | 577, 1045, 1123, 1186, 2284, 2355 |
| BstFNI | CGCG | 2 cut(s) | 258, 260 |
| BstHHI | GCGC | 4 cut(s) | 260, 262, 1089, 1868 |
| BstKTI | GATC | 6 cut(s) | 172, 253, 498, 1316, 1552, 2395 |
| BstMAI | GTCTC | 5 cut(s) | 776, 873, 1077, 2023, 2363 |
| BstMBI | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| BstNI | CCWGG | 2 cut(s) | 1187, 2592 |
| BstNSI | RCATGY | 3 cut(s) | 1673, 2263, 2606 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2375 |
| BstSCI | CCNGG | 6 cut(s) | 177, 1185, 1971, 1972, 2146, 2590 |
| BstSFI | CTRYAG | 8 cut(s) | 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670 |
| BstSLI | GKGCMC | 1 cut(s) | 1609 |
| BstUI | CGCG | 2 cut(s) | 258, 260 |
| BstV2I | GAAGAC | 2 cut(s) | 1286, 1970 |
| BstX2I | RGATCY | 2 cut(s) | 250, 1313 |
| BstYI | RGATCY | 2 cut(s) | 250, 1313 |
| Bsu15I | ATCGAT | 2 cut(s) | 1248, 1413 |
| BsuRI | GGCC | 3 cut(s) | 478, 1934, 2660 |
| BsuTUI | ATCGAT | 2 cut(s) | 1248, 1413 |
| BtgI | CCRYGG | 1 cut(s) | 279 |
| BtgZI | GCGATG | 1 cut(s) | 1501 |
| BtrI | CACGTC | 1 cut(s) | 1053 |
| BtsCI | GGATG | 6 cut(s) | 577, 1045, 1123, 1186, 2284, 2355 |
| BtsI | GCAGTG | 4 cut(s) | 508, 1659, 1788, 2500 |
| BtsIMutI | CAGTG | 7 cut(s) | 102, 508, 1023, 1607, 1659, 1788, 2500 |
| BveI | ACCTGC | 2 cut(s) | 1649, 2108 |
| CaiI | CAGNNNCTG | 6 cut(s) | 838, 1343, 2021, 2432, 2669, 2678 |
| CciI | TCATGA | 1 cut(s) | 1837 |
| CfoI | GCGC | 4 cut(s) | 260, 262, 1089, 1868 |
| Cfr10I | RCCGGY | 1 cut(s) | 1526 |
| Cfr13I | GGNCC | 4 cut(s) | 175, 476, 1566, 2658 |
| Cfr9I | CCCGGG | 1 cut(s) | 1972 |
| ClaI | ATCGAT | 2 cut(s) | 1248, 1413 |
| Csp6I | GTAC | 3 cut(s) | 100, 356, 2257 |
| CviQI | GTAC | 3 cut(s) | 100, 356, 2257 |
| DdeI | CTNAG | 6 cut(s) | 69, 323, 603, 1015, 2332, 2486 |
| DpnI | GATC | 6 cut(s) | 171, 252, 497, 1315, 1551, 2394 |
| DpnII | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| Eam1104I | CTCTTC | 2 cut(s) | 1455, 2577 |
| EarI | CTCTTC | 2 cut(s) | 1455, 2577 |
| EciI | GGCGGA | 1 cut(s) | 1277 |
| Ecl136II | GAGCTC | 2 cut(s) | 1170, 2462 |
| Eco130I | CCWWGG | 3 cut(s) | 279, 1935, 2289 |
| Eco147I | AGGCCT | 1 cut(s) | 1934 |
| Eco24I | GRGCYC | 2 cut(s) | 1172, 2464 |
| Eco31I | GGTCTC | 2 cut(s) | 776, 2363 |
| Eco47I | GGWCC | 2 cut(s) | 175, 1566 |
| Eco53kI | GAGCTC | 2 cut(s) | 1170, 2462 |
| Eco57I | CTGAAG | 8 cut(s) | 350, 860, 1316, 1419, 1479, 2043, 2109, 2378 |
| Eco88I | CYCGRG | 2 cut(s) | 866, 1972 |
| EcoICRI | GAGCTC | 2 cut(s) | 1170, 2462 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| EcoRII | CCWGG | 2 cut(s) | 1185, 2590 |
| EcoT14I | CCWWGG | 3 cut(s) | 279, 1935, 2289 |
| EcoT38I | GRGCYC | 2 cut(s) | 1172, 2464 |
| ErhI | CCWWGG | 3 cut(s) | 279, 1935, 2289 |
| FaqI | GGGAC | 4 cut(s) | 188, 721, 849, 1800 |
| FauI | CCCGC | 3 cut(s) | 1314, 1912, 2649 |
| FokI | GGATG | 6 cut(s) | 584, 1052, 1130, 1193, 2291, 2362 |
| FriOI | GRGCYC | 2 cut(s) | 1172, 2464 |
| FspBI | CTAG | 5 cut(s) | 188, 953, 1242, 1307, 2343 |
| FspI | TGCGCA | 1 cut(s) | 1088 |
| GlaI | GCGC | 4 cut(s) | 259, 261, 1088, 1867 |
| GsuI | CTGGAG | 3 cut(s) | 452, 1491, 2561 |
| HaeIII | GGCC | 3 cut(s) | 478, 1934, 2660 |
| HapII | CCGG | 4 cut(s) | 178, 1527, 1973, 2147 |
| HhaI | GCGC | 4 cut(s) | 260, 262, 1089, 1868 |
| Hin6I | GCGC | 4 cut(s) | 258, 260, 1087, 1866 |
| HinP1I | GCGC | 4 cut(s) | 258, 260, 1087, 1866 |
| HincII | GTYRAC | 1 cut(s) | 655 |
| HindII | GTYRAC | 1 cut(s) | 655 |
| HindIII | AAGCTT | 3 cut(s) | 320, 548, 1539 |
| HpaII | CCGG | 4 cut(s) | 178, 1527, 1973, 2147 |
| HphI | GGTGA | 2 cut(s) | 1589, 2726 |
| Hpy166II | GTNNAC | 7 cut(s) | 100, 240, 577, 655, 1021, 1607, 2583 |
| Hpy8I | GTNNAC | 7 cut(s) | 100, 240, 577, 655, 1021, 1607, 2583 |
| HpyCH4III | ACNGT | 2 cut(s) | 142, 644 |
| HpyCH4IV | ACGT | 5 cut(s) | 382, 651, 1052, 1291, 1594 |
| HpyF3I | CTNAG | 6 cut(s) | 69, 323, 603, 1015, 2332, 2486 |
| HpySE526I | ACGT | 5 cut(s) | 382, 651, 1052, 1291, 1594 |
| HspAI | GCGC | 4 cut(s) | 258, 260, 1087, 1866 |
| Kzo9I | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| LguI | GCTCTTC | 1 cut(s) | 2577 |
| LmnI | GCTCC | 4 cut(s) | 898, 2459, 2639, 2686 |
| MaeI | CTAG | 5 cut(s) | 188, 953, 1242, 1307, 2343 |
| MaeII | ACGT | 5 cut(s) | 382, 651, 1052, 1291, 1594 |
| MaeIII | GTNAC | 3 cut(s) | 918, 1691, 2449 |
| MalI | GATC | 6 cut(s) | 171, 252, 497, 1315, 1551, 2394 |
| MboI | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| MfeI | CAATTG | 1 cut(s) | 1908 |
| MflI | RGATCY | 2 cut(s) | 250, 1313 |
| MhlI | GDGCHC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| MlyI | GAGTC | 3 cut(s) | 13, 193, 1854 |
| MmeI | TCCRAC | 1 cut(s) | 1474 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1329 |
| MseI | TTAA | 4 cut(s) | 315, 591, 1160, 2142 |
| MslI | CAYNNNNRTG | 2 cut(s) | 582, 1509 |
| MspA1I | CMGCKG | 6 cut(s) | 347, 1601, 1862, 1919, 2114, 2666 |
| MspCI | CTTAAG | 1 cut(s) | 314 |
| MspI | CCGG | 4 cut(s) | 178, 1527, 1973, 2147 |
| MspR9I | CCNGG | 6 cut(s) | 179, 1187, 1973, 1974, 2148, 2592 |
| MunI | CAATTG | 1 cut(s) | 1908 |
| Mva1269I | GAATGC | 2 cut(s) | 1378, 2466 |
| MvaI | CCWGG | 2 cut(s) | 1187, 2592 |
| MvnI | CGCG | 2 cut(s) | 258, 260 |
| NciI | CCSGG | 4 cut(s) | 179, 1973, 1974, 2148 |
| NcoI | CCATGG | 1 cut(s) | 279 |
| NdeII | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| NheI | GCTAGC | 1 cut(s) | 1241 |
| NlaIV | GGNNCC | 2 cut(s) | 176, 2745 |
| NmeAIII | GCCGAG | 3 cut(s) | 84, 424, 1120 |
| NsbI | TGCGCA | 1 cut(s) | 1088 |
| NspI | RCATGY | 3 cut(s) | 1673, 2263, 2606 |
| OliI | CACNNNNGTG | 1 cut(s) | 1509 |
| PaeI | GCATGC | 2 cut(s) | 1673, 2606 |
| PagI | TCATGA | 1 cut(s) | 1837 |
| PaqCI | CACCTGC | 2 cut(s) | 1649, 2108 |
| PauI | GCGCGC | 1 cut(s) | 258 |
| PceI | AGGCCT | 1 cut(s) | 1934 |
| PciI | ACATGT | 1 cut(s) | 2259 |
| PciSI | GCTCTTC | 1 cut(s) | 2577 |
| PctI | GAATGC | 2 cut(s) | 1378, 2466 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1329 |
| PfeI | GAWTC | 7 cut(s) | 310, 341, 1066, 1410, 1483, 1876, 2131 |
| PfoI | TCCNGGA | 1 cut(s) | 1185 |
| PleI | GAGTC | 3 cut(s) | 12, 192, 1853 |
| PpsI | GAGTC | 3 cut(s) | 12, 192, 1853 |
| Ppu21I | YACGTR | 1 cut(s) | 383 |
| PscI | ACATGT | 1 cut(s) | 2259 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2375 |
| PshBI | ATTAAT | 1 cut(s) | 591 |
| Psp124BI | GAGCTC | 2 cut(s) | 1172, 2464 |
| Psp1406I | AACGTT | 1 cut(s) | 651 |
| Psp6I | CCWGG | 2 cut(s) | 1185, 2590 |
| PspGI | CCWGG | 2 cut(s) | 1185, 2590 |
| PspN4I | GGNNCC | 2 cut(s) | 176, 2745 |
| PspPI | GGNCC | 4 cut(s) | 175, 476, 1566, 2658 |
| PstI | CTGCAG | 6 cut(s) | 407, 1783, 1918, 2119, 2437, 2674 |
| PstNI | CAGNNNCTG | 6 cut(s) | 838, 1343, 2021, 2432, 2669, 2678 |
| PsuI | RGATCY | 2 cut(s) | 250, 1313 |
| PteI | GCGCGC | 1 cut(s) | 258 |
| PvuII | CAGCTG | 4 cut(s) | 1601, 1862, 2114, 2666 |
| RsaI | GTAC | 3 cut(s) | 101, 357, 2258 |
| RsaNI | GTAC | 3 cut(s) | 100, 356, 2257 |
| RseI | CAYNNNNRTG | 2 cut(s) | 582, 1509 |
| SacI | GAGCTC | 2 cut(s) | 1172, 2464 |
| SapI | GCTCTTC | 1 cut(s) | 2577 |
| SaqAI | TTAA | 4 cut(s) | 315, 591, 1160, 2142 |
| Sau3AI | GATC | 6 cut(s) | 169, 250, 495, 1313, 1549, 2392 |
| Sau96I | GGNCC | 4 cut(s) | 175, 476, 1566, 2658 |
| SchI | GAGTC | 3 cut(s) | 13, 193, 1854 |
| ScrFI | CCNGG | 6 cut(s) | 179, 1187, 1973, 1974, 2148, 2592 |
| SduI | GDGCHC | 6 cut(s) | 1172, 1609, 1804, 2002, 2125, 2464 |
| SfcI | CTRYAG | 8 cut(s) | 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670 |
| SinI | GGWCC | 2 cut(s) | 175, 1566 |
| SmaI | CCCGGG | 1 cut(s) | 1974 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 582, 1509 |
| SmlI | CTYRAG | 5 cut(s) | 314, 1058, 1130, 2549, 2726 |
| SmoI | CTYRAG | 5 cut(s) | 314, 1058, 1130, 2549, 2726 |
| SphI | GCATGC | 2 cut(s) | 1673, 2606 |
| SseBI | AGGCCT | 1 cut(s) | 1934 |
| SsiI | CCGC | 7 cut(s) | 345, 731, 1262, 1321, 1919, 2656, 2661 |
| SspMI | CTAG | 5 cut(s) | 188, 953, 1242, 1307, 2343 |
| SstI | GAGCTC | 2 cut(s) | 1172, 2464 |
| StuI | AGGCCT | 1 cut(s) | 1934 |
| StyD4I | CCNGG | 6 cut(s) | 177, 1185, 1971, 1972, 2146, 2590 |
| StyI | CCWWGG | 3 cut(s) | 279, 1935, 2289 |
| TaaI | ACNGT | 2 cut(s) | 142, 644 |
| TaiI | ACGT | 5 cut(s) | 385, 654, 1055, 1294, 1597 |
| TaqI | TCGA | 8 cut(s) | 299, 553, 774, 969, 1248, 1413, 1900, 1929 |
| TatI | WGTACW | 2 cut(s) | 99, 355 |
| TauI | GCSGC | 1 cut(s) | 2663 |
| TfiI | GAWTC | 7 cut(s) | 310, 341, 1066, 1410, 1483, 1876, 2131 |
| Tru1I | TTAA | 4 cut(s) | 315, 591, 1160, 2142 |
| Tru9I | TTAA | 4 cut(s) | 315, 591, 1160, 2142 |
| TscAI | CASTG | 7 cut(s) | 102, 508, 1023, 1614, 1659, 1788, 2500 |
| TspGWI | ACGGA | 1 cut(s) | 2150 |
| TspMI | CCCGGG | 1 cut(s) | 1972 |
| TspRI | CASTG | 7 cut(s) | 102, 508, 1023, 1614, 1659, 1788, 2500 |
| Vha464I | CTTAAG | 1 cut(s) | 314 |
| VneI | GTGCAC | 1 cut(s) | 1605 |
| VpaK11BI | GGWCC | 2 cut(s) | 175, 1566 |
| VspI | ATTAAT | 1 cut(s) | 591 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| XapI | RAATTY | 5 cut(s) | 376, 616, 1360, 1615, 1700 |
| XceI | RCATGY | 3 cut(s) | 1673, 2263, 2606 |
| XmaI | CCCGGG | 1 cut(s) | 1972 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1329 |
| XspI | CTAG | 5 cut(s) | 188, 953, 1242, 1307, 2343 |