Rw5G017280

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000049
Physical Location & Seq
Reverse (-)
22032978 .. 22034219
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G017280.1

Sequence Viewer

Length: 864 bp
ATGTCGGATCCCATCTCCAGCCTAGCGGCGGCTGCTTTCACTCTCAATGATAATGCACACGTCGATCTCTGGTTGGCCGGGGAAGCGGCGCTACAAGACAACCACCATTATATAGTGGGACAACTCCTCACAATGAGGTCAAATCTGGTCGGTTTTATTGGATCTGCCATTGGTAGGGTTTTGAGACTTGACATGGTGGCCTTGAACAGTAAGGACGAGGAACAGAGGATCTGGTTAGTCATTGATACCAGGAGAAGATTTAGGGTTTTCAGAAGCTTCTCTTTCTCTGCTTCTGTCGAAGTTGATGTCACAATTCAATATGAGAAAGTGTGTGGGCTGTGTCGCGAGAGTGGATTGTTTGAACACCCCATTGATGGGTGTGACCGGTTATTTATCAAGGAGGAGGAAGCCCTCAAATCTGTTGTAGTTGTGAATGCGATGGAGGCGAAGAGTTTCCTTTCTCCAGAGGTTGTTGAGCGTGCAACACAACACTGTGGTCAAGCAGCTTTCTTCTCGGAGCATCTCAATTTTGGCCTTAAGACTGCTGGTCTGCTGCAAAAATTGGTGAAGCCAGGACCACACGTGGAACCAAAGCATAGCTTGGTCAGTAGCATGCTACATAGCTCACCTGGGGATCGATTCATCCAAGGATGCAAAGATGGTGGCTTTACGAGGTCAGCATTCGAGACTATCAAGATACAGGAGGCCCATGGCATTATTTGCGGCCAAAAGCGTGGTGTTGCCCTTTCTTTAGTGCGCCCGGGTAAGAAGCTCCTCGCCTTACCTGCTCCTGCTATGACTAGGGTTAGAGATCTGTCCCTAGCCTTACCTCAGAAGGATGACGGCTTGATTATCTCGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

31.53

Weight (kDa)

7.7

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 793
AccII CGCG 1 cut(s) 345
AciI CCGC 4 cut(s) 26, 29, 86, 723
AclWI GGATC 5 cut(s) 2, 15, 169, 236, 642
AcoI YGGCCR 2 cut(s) 75, 724
AcvI CACGTG 1 cut(s) 583
AfiI CCNNNNNNNGG 4 cut(s) 28, 174, 374, 375
AflII CTTAAG 1 cut(s) 536
AflIII ACRYGT 2 cut(s) 58, 580
AgeI ACCGGT 1 cut(s) 384
AgsI TTSAA 3 cut(s) 205, 317, 362
AhdI GACNNNNNGTC 1 cut(s) 546
AjiI CACGTC 1 cut(s) 61
AjnI CCWGG 3 cut(s) 248, 571, 628
AluBI AGCT 5 cut(s) 276, 506, 600, 624, 772
AluI AGCT 5 cut(s) 276, 506, 600, 624, 772
Alw26I GTCTC 2 cut(s) 178, 680
AlwI GGATC 5 cut(s) 2, 15, 169, 236, 642
Ama87I CYCGRG 1 cut(s) 760
AoxI GGCC 5 cut(s) 75, 198, 532, 705, 724
ApeKI GCWGC 3 cut(s) 32, 503, 553
ArsI GACNNNNNNTTYG 2 cut(s) 291, 323
AsiGI ACCGGT 1 cut(s) 384
Asp700I GAANNNNTTC 1 cut(s) 452
AspLEI GCGC 2 cut(s) 91, 759
AspS9I GGNCC 2 cut(s) 575, 706
AsuC2I CCSGG 3 cut(s) 79, 761, 762
AsuHPI GGTGA 2 cut(s) 577, 618
AvaI CYCGRG 1 cut(s) 760
AvaII GGWCC 1 cut(s) 575
BamHI GGATCC 1 cut(s) 7
BarI GAAGNNNNNNTAC 2 cut(s) 75, 107
BbrPI CACGTG 1 cut(s) 583
BbvI GCAGC 3 cut(s) 19, 515, 540
BccI CCATC 4 cut(s) 20, 368, 433, 653
BceAI ACGGC 1 cut(s) 859
BciT130I CCWGG 3 cut(s) 250, 573, 630
BcnI CCSGG 3 cut(s) 79, 761, 762
BcoDI GTCTC 2 cut(s) 178, 680
BfaI CTAG 3 cut(s) 23, 801, 821
BfoI RGCGCY 1 cut(s) 92
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 793
BglII AGATCT 1 cut(s) 811
BisI GCNGC 7 cut(s) 27, 30, 33, 87, 504, 554, 724
BlsI GCNGC 7 cut(s) 28, 31, 34, 88, 505, 555, 725
Bme1390I CCNGG 6 cut(s) 79, 250, 573, 630, 761, 762
Bme18I GGWCC 1 cut(s) 575
BmeRI GACNNNNNGTC 1 cut(s) 546
BmeT110I CYCGRG 1 cut(s) 760
BmgBI CACGTC 1 cut(s) 61
BmgT120I GGNCC 2 cut(s) 575, 706
BmiI GGNNCC 2 cut(s) 9, 588
BmrFI CCNGG 6 cut(s) 79, 250, 573, 630, 761, 762
BmsI GCATC 2 cut(s) 529, 641
BpmI CTGGAG 1 cut(s) 447
BpuMI CCSGG 3 cut(s) 79, 761, 762
Bsa29I ATCGAT 1 cut(s) 637
BsaAI YACGTR 1 cut(s) 583
BsaJI CCNNGG 5 cut(s) 78, 629, 646, 709, 760
BsaWI WCCGGW 1 cut(s) 384
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 174, 374, 375
Bse118I RCCGGY 1 cut(s) 384
BseBI CCWGG 3 cut(s) 250, 573, 630
BseCI ATCGAT 1 cut(s) 637
BseDI CCNNGG 5 cut(s) 78, 629, 646, 709, 760
BseGI GGATG 3 cut(s) 642, 656, 844
BseLI CCNNNNNNNGG 4 cut(s) 28, 174, 374, 375
BseMII CTCAG 1 cut(s) 845
BseRI GAGGAG 3 cut(s) 116, 416, 764
BseXI GCAGC 3 cut(s) 19, 515, 540
Bsh1236I CGCG 1 cut(s) 345
BshFI GGCC 5 cut(s) 77, 200, 534, 707, 726
BshTI ACCGGT 1 cut(s) 384
BshVI ATCGAT 1 cut(s) 637
BsiHKCI CYCGRG 1 cut(s) 760
BsiSI CCGG 3 cut(s) 78, 385, 761
BslFI GGGAC 2 cut(s) 132, 802
BslI CCNNNNNNNGG 4 cut(s) 28, 174, 374, 375
BsmAI GTCTC 2 cut(s) 178, 680
BsmFI GGGAC 2 cut(s) 132, 802
BsmI GAATGC 2 cut(s) 439, 680
BsnI GGCC 5 cut(s) 77, 200, 534, 707, 726
BsoBI CYCGRG 1 cut(s) 760
Bsp143I GATC 6 cut(s) 7, 64, 161, 228, 634, 811
Bsp19I CCATGG 1 cut(s) 709
Bsp68I TCGCGA 1 cut(s) 345
BspACI CCGC 4 cut(s) 26, 29, 86, 723
BspANI GGCC 5 cut(s) 77, 200, 534, 707, 726
BspCNI CTCAG 1 cut(s) 844
BspDI ATCGAT 1 cut(s) 637
BspFNI CGCG 1 cut(s) 345
BspLI GGNNCC 2 cut(s) 9, 588
BspMI ACCTGC 1 cut(s) 793
BspPI GGATC 5 cut(s) 2, 15, 169, 236, 642
BspTI CTTAAG 1 cut(s) 536
BsrFI RCCGGY 1 cut(s) 384
BssAI RCCGGY 1 cut(s) 384
BssECI CCNNGG 5 cut(s) 78, 629, 646, 709, 760
BssMI GATC 6 cut(s) 7, 64, 161, 228, 634, 811
BssT1I CCWWGG 2 cut(s) 646, 709
Bst2UI CCWGG 3 cut(s) 250, 573, 630
Bst4CI ACNGT 2 cut(s) 209, 494
Bst6I CTCTTC 1 cut(s) 443
BstAFI CTTAAG 1 cut(s) 536
BstAPI GCANNNNNTGC 1 cut(s) 720
BstBAI YACGTR 1 cut(s) 583
BstC8I GCNNGC 2 cut(s) 480, 614
BstDEI CTNAG 1 cut(s) 831
BstDSI CCRYGG 1 cut(s) 709
BstF5I GGATG 3 cut(s) 642, 656, 844
BstFNI CGCG 1 cut(s) 345
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 2 cut(s) 91, 759
BstKTI GATC 6 cut(s) 10, 67, 164, 231, 637, 814
BstMAI GTCTC 2 cut(s) 178, 680
BstMBI GATC 6 cut(s) 7, 64, 161, 228, 634, 811
BstMWI GCNNNNNNNGC 5 cut(s) 32, 83, 443, 720, 785
BstNI CCWGG 3 cut(s) 250, 573, 630
BstNSI RCATGY 1 cut(s) 616
BstSCI CCNGG 6 cut(s) 77, 248, 571, 628, 759, 760
BstUI CGCG 1 cut(s) 345
BstV1I GCAGC 3 cut(s) 19, 515, 540
BstX2I RGATCY 4 cut(s) 7, 161, 228, 811
BstXI CCANNNNNNTGG 1 cut(s) 734
BstYI RGATCY 4 cut(s) 7, 161, 228, 811
Bsu15I ATCGAT 1 cut(s) 637
BsuRI GGCC 5 cut(s) 77, 200, 534, 707, 726
BsuTUI ATCGAT 1 cut(s) 637
BtgI CCRYGG 1 cut(s) 709
BtgZI GCGATG 1 cut(s) 452
BtrI CACGTC 1 cut(s) 61
BtsCI GGATG 3 cut(s) 642, 656, 844
BtsIMutI CAGTG 1 cut(s) 490
BtuMI TCGCGA 1 cut(s) 345
BveI ACCTGC 1 cut(s) 793
Cac8I GCNNGC 2 cut(s) 480, 614
CfoI GCGC 2 cut(s) 91, 759
Cfr10I RCCGGY 1 cut(s) 384
Cfr13I GGNCC 2 cut(s) 575, 706
Cfr9I CCCGGG 1 cut(s) 760
ClaI ATCGAT 1 cut(s) 637
CspAI ACCGGT 1 cut(s) 384
CspCI CAANNNNNGTGG 2 cut(s) 643, 678
CviAII CATG 3 cut(s) 193, 613, 710
DdeI CTNAG 1 cut(s) 831
DpnI GATC 6 cut(s) 9, 66, 163, 230, 636, 813
DpnII GATC 6 cut(s) 7, 64, 161, 228, 634, 811
DriI GACNNNNNGTC 1 cut(s) 546
EaeI YGGCCR 2 cut(s) 75, 724
Eam1104I CTCTTC 1 cut(s) 443
Eam1105I GACNNNNNGTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 443
Eco130I CCWWGG 2 cut(s) 646, 709
Eco47I GGWCC 1 cut(s) 575
Eco72I CACGTG 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 760
EcoRII CCWGG 3 cut(s) 248, 571, 628
EcoT14I CCWWGG 2 cut(s) 646, 709
ErhI CCWWGG 2 cut(s) 646, 709
FaeI CATG 3 cut(s) 196, 616, 713
FalI AAGNNNNNCTT 4 cut(s) 265, 297, 584, 616
FaqI GGGAC 2 cut(s) 132, 802
FatI CATG 3 cut(s) 192, 612, 709
Fnu4HI GCNGC 7 cut(s) 27, 30, 33, 87, 504, 554, 724
FokI GGATG 3 cut(s) 629, 663, 851
Fsp4HI GCNGC 7 cut(s) 27, 30, 33, 87, 504, 554, 724
FspBI CTAG 3 cut(s) 23, 801, 821
GlaI GCGC 2 cut(s) 90, 758
GluI GCNGC 7 cut(s) 27, 30, 33, 87, 504, 554, 724
GsuI CTGGAG 1 cut(s) 447
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 5 cut(s) 77, 200, 534, 707, 726
HapII CCGG 3 cut(s) 78, 385, 761
HhaI GCGC 2 cut(s) 91, 759
Hin1II CATG 3 cut(s) 196, 616, 713
Hin6I GCGC 2 cut(s) 89, 757
HinP1I GCGC 2 cut(s) 89, 757
HindIII AAGCTT 1 cut(s) 274
HinfI GANTC 1 cut(s) 639
HpaII CCGG 3 cut(s) 78, 385, 761
HphI GGTGA 2 cut(s) 577, 618
Hpy188I TCNGA 4 cut(s) 7, 272, 517, 834
Hpy188III TCNNGA 4 cut(s) 344, 464, 685, 694
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 1 cut(s) 829
HpyCH4III ACNGT 2 cut(s) 209, 494
HpyCH4IV ACGT 2 cut(s) 60, 582
HpyCH4V TGCA 4 cut(s) 56, 482, 556, 654
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 83, 443, 720, 785
HpyF3I CTNAG 1 cut(s) 831
HpySE526I ACGT 2 cut(s) 60, 582
Hsp92II CATG 3 cut(s) 196, 616, 713
HspAI GCGC 2 cut(s) 89, 757
Kzo9I GATC 6 cut(s) 7, 64, 161, 228, 634, 811
LmnI GCTCC 3 cut(s) 517, 777, 793
Lsp1109I GCAGC 3 cut(s) 19, 515, 540
LweI GCATC 2 cut(s) 529, 641
MaeI CTAG 3 cut(s) 23, 801, 821
MaeII ACGT 2 cut(s) 60, 582
MaeIII GTNAC 2 cut(s) 307, 380
MalI GATC 6 cut(s) 9, 66, 163, 230, 636, 813
MboI GATC 6 cut(s) 7, 64, 161, 228, 634, 811
MboII GAAGA 3 cut(s) 267, 460, 502
MflI RGATCY 4 cut(s) 7, 161, 228, 811
MluCI AATT 3 cut(s) 312, 526, 560
MroXI GAANNNNTTC 1 cut(s) 452
MseI TTAA 1 cut(s) 537
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 3 cut(s) 78, 385, 761
MspR9I CCNGG 6 cut(s) 79, 250, 573, 630, 761, 762
Mva1269I GAATGC 2 cut(s) 439, 680
MvaI CCWGG 3 cut(s) 250, 573, 630
MvnI CGCG 1 cut(s) 345
MwoI GCNNNNNNNGC 5 cut(s) 32, 83, 443, 720, 785
NciI CCSGG 3 cut(s) 79, 761, 762
NcoI CCATGG 1 cut(s) 709
NdeII GATC 6 cut(s) 7, 64, 161, 228, 634, 811
NlaIII CATG 3 cut(s) 196, 616, 713
NlaIV GGNNCC 2 cut(s) 9, 588
NmuCI GTSAC 2 cut(s) 307, 380
NruI TCGCGA 1 cut(s) 345
NspI RCATGY 1 cut(s) 616
PaeI GCATGC 1 cut(s) 616
PctI GAATGC 2 cut(s) 439, 680
PdmI GAANNNNTTC 1 cut(s) 452
PfeI GAWTC 1 cut(s) 639
PinAI ACCGGT 1 cut(s) 384
PkrI GCNGC 7 cut(s) 28, 31, 34, 88, 505, 555, 725
PmaCI CACGTG 1 cut(s) 583
PmlI CACGTG 1 cut(s) 583
Ppu21I YACGTR 1 cut(s) 583
Psp6I CCWGG 3 cut(s) 248, 571, 628
PspCI CACGTG 1 cut(s) 583
PspGI CCWGG 3 cut(s) 248, 571, 628
PspN4I GGNNCC 2 cut(s) 9, 588
PspPI GGNCC 2 cut(s) 575, 706
PsuI RGATCY 4 cut(s) 7, 161, 228, 811
RruI TCGCGA 1 cut(s) 345
SaqAI TTAA 1 cut(s) 537
SatI GCNGC 7 cut(s) 27, 30, 33, 87, 504, 554, 724
Sau3AI GATC 6 cut(s) 7, 64, 161, 228, 634, 811
Sau96I GGNCC 2 cut(s) 575, 706
ScrFI CCNGG 6 cut(s) 79, 250, 573, 630, 761, 762
SfaNI GCATC 2 cut(s) 529, 641
SinI GGWCC 1 cut(s) 575
SmaI CCCGGG 1 cut(s) 762
SmlI CTYRAG 1 cut(s) 536
SmoI CTYRAG 1 cut(s) 536
SphI GCATGC 1 cut(s) 616
Sse9I AATT 3 cut(s) 312, 526, 560
SsiI CCGC 4 cut(s) 26, 29, 86, 723
SspMI CTAG 3 cut(s) 23, 801, 821
StyD4I CCNGG 6 cut(s) 77, 248, 571, 628, 759, 760
StyI CCWWGG 2 cut(s) 646, 709
TaaI ACNGT 2 cut(s) 209, 494
TaiI ACGT 2 cut(s) 63, 585
TaqI TCGA 4 cut(s) 63, 297, 637, 684
TasI AATT 3 cut(s) 312, 526, 560
TauI GCSGC 4 cut(s) 29, 32, 89, 726
TfiI GAWTC 1 cut(s) 639
Tru1I TTAA 1 cut(s) 537
Tru9I TTAA 1 cut(s) 537
TscAI CASTG 1 cut(s) 497
TseFI GTSAC 2 cut(s) 307, 380
TseI GCWGC 3 cut(s) 32, 503, 553
Tsp45I GTSAC 2 cut(s) 307, 380
TspDTI ATGAA 1 cut(s) 631
TspMI CCCGGG 1 cut(s) 760
TspRI CASTG 1 cut(s) 497
Vha464I CTTAAG 1 cut(s) 536
VpaK11BI GGWCC 1 cut(s) 575
XceI RCATGY 1 cut(s) 616
XmaI CCCGGG 1 cut(s) 760
XmnI GAANNNNTTC 1 cut(s) 452
XspI CTAG 3 cut(s) 23, 801, 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.