RLG00000002381

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000049
Physical Location & Seq
Reverse (-)
33123538 .. 33129849
6312 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002381

Sequence Viewer

Length: 1206 bp
ATGGAGGGCCTGTCTTTGACTGTGGGTAAGGCTGTGGGTGCTTCTGTGATGGAGGTGGAGGTGGGCAAGGGAGGAACTGATCTGGTTTGTTTGGAGGCTGTCTCGGGGTCGGAGGGTCAGGGTGTTGGGACTTTACGGATTGGGAGGGAAGCTAGAGCTGGAGTGTCCAGTGGTGTCTTGAGTTCCAAGATGATGGGAAAACAGCTGGGGATGGAGCCGGTCCTGCAACAGCTGAAGCCTCATGATCCTTTGCTTATCACTCAGCAGGATGTGGGGTCGAAAGCATTGGCTTTGAGTCCAGTAATAACTGGGAGCGGGAAAGAGAATATTCGAGAGGAAGAGGTGGCTCCACTTGTGGAGTCTCCGGTTGCAGATGGAGTGGTAGAAGAAAGAGGGGCAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCTGAAAGACAGCGTCAGAGCCCCGACCAGGAGCAGAGCCCGGACCCGAACTCCGGCTTCCTCGTGGAGCTTCGGAGGTCTGATGACCTCCCTAGCATGGCGGCGGAGGATCGGAGGTTTCTTCTCGTGGCAGCGGTGCTCGCAATCAGAGATGCAGTCGAGGTCAAGCATCTCACTGCGGAGCTTGTCGGAGACAGAGAGGACCTTGCGTCCGAGAGTGGGTCTTCCCAAAGTAAGCTTAGTCAGAATGAAGTGGTGAGGCCTTTTCGCATGGACGGAGACGTGGTCTACACGGCGTGGGATTGGCCTATTATGATCCAGATCGGAAACGATCTGGTTACTTGGAGGTTGAGGTGGTTTCCTAGGTTGCCGCGCGGTGCAGTTGTTAATCAAGGGTACGATCTCAGGTTCGGAGGAAGGGTGACGAGGGGTTCTGATGGTGATGAGCCAGGTTGGCACCCCAGTTCTCTTCTGCGTCTAATTGGGGTGAGGTTTGTGAAGGAGGCGGCTTCTGAGGTTTACTCCGGTAATAATTCCAAGGTGTGGATATCAGAATGCTTCTTCCAAGGTGCGCAGGCAGTAGTGTGGGCATCTGGGTCTAGATGGATATCCAGATCTGCTCTGGATCGGGTATGCCTTTTAGGAATAGCACCAATGACTGTTGCGATGATTAATCAGTGGTGGCAACCAGGGGTGACAGTGGCGGTTGTGTTGTTGAGTGGTTGGTGGGACATTGCTGCTCCTTCTTATGCTACCGGGTGGATAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

402

Amino Acids

43.63

Weight (kDa)

4.85

Isoelectric Point (pI)

54.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1008
AccB1I GGYRCC 1 cut(s) 891
AccB7I CCANNNNNTGG 1 cut(s) 978
AccBSI CCGCTC 1 cut(s) 315
AccI GTMKAC 1 cut(s) 723
AccII CGCG 2 cut(s) 808, 810
AciI CCGC 9 cut(s) 315, 536, 539, 569, 614, 806, 810, 941, 1139
AclWI GGATC 4 cut(s) 239, 552, 745, 1068
AcuI CTGAAG 1 cut(s) 254
AdeI CACNNNGTG 1 cut(s) 732
AfaI GTAC 1 cut(s) 833
AfiI CCNNNNNNNGG 5 cut(s) 463, 488, 532, 654, 978
AhdI GACNNNNNGTC 1 cut(s) 643
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 3 cut(s) 462, 883, 1123
AluBI AGCT 7 cut(s) 152, 158, 205, 232, 505, 619, 673
AluI AGCT 7 cut(s) 152, 158, 205, 232, 505, 619, 673
Alw21I GWGCWC 1 cut(s) 576
Alw26I GTCTC 4 cut(s) 106, 366, 621, 708
AlwI GGATC 4 cut(s) 239, 552, 745, 1068
Ama87I CYCGRG 1 cut(s) 103
AoxI GGCC 3 cut(s) 7, 695, 740
ApeKI GCWGC 2 cut(s) 566, 1172
AseI ATTAAT 1 cut(s) 1107
AspA2I CCTAGG 1 cut(s) 797
AspLEI GCGC 2 cut(s) 810, 1009
AspS9I GGNCC 4 cut(s) 7, 220, 478, 637
AsuC2I CCSGG 2 cut(s) 476, 1192
AsuHPI GGTGA 5 cut(s) 703, 868, 887, 934, 1141
AvaI CYCGRG 1 cut(s) 103
AvaII GGWCC 3 cut(s) 220, 478, 637
AvrII CCTAGG 1 cut(s) 797
BanI GGYRCC 1 cut(s) 891
BanII GRGCYC 2 cut(s) 458, 476
BauI CACGAG 2 cut(s) 497, 560
BbsI GAAGAC 1 cut(s) 651
Bbv12I GWGCWC 1 cut(s) 576
BbvI GCAGC 2 cut(s) 578, 1159
BccI CCATC 6 cut(s) 43, 187, 205, 368, 866, 1032
BceAI ACGGC 1 cut(s) 744
BciT130I CCWGG 3 cut(s) 464, 885, 1125
BcnI CCSGG 2 cut(s) 476, 1192
BcoDI GTCTC 4 cut(s) 106, 366, 621, 708
BfaI CTAG 4 cut(s) 153, 528, 798, 1035
BglI GCCNNNNNGGC 1 cut(s) 889
BglII AGATCT 1 cut(s) 1049
BisI GCNGC 5 cut(s) 537, 567, 806, 942, 1173
BlnI CCTAGG 1 cut(s) 797
BlsI GCNGC 5 cut(s) 538, 568, 807, 943, 1174
Bme1390I CCNGG 5 cut(s) 464, 476, 885, 1125, 1192
Bme18I GGWCC 3 cut(s) 220, 478, 637
BmeRI GACNNNNNGTC 1 cut(s) 643
BmeT110I CYCGRG 1 cut(s) 103
BmgBI CACGTC 1 cut(s) 718
BmgT120I GGNCC 4 cut(s) 7, 220, 478, 637
BmiI GGNNCC 4 cut(s) 216, 348, 480, 893
BmrFI CCNGG 5 cut(s) 464, 476, 885, 1125, 1192
BmrI ACTGGG 2 cut(s) 318, 891
BmsI GCATC 3 cut(s) 577, 613, 1034
BmuI ACTGGG 2 cut(s) 318, 891
BpiI GAAGAC 1 cut(s) 651
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 941, 973
BpmI CTGGAG 1 cut(s) 180
BpuEI CTTGAG 1 cut(s) 199
BpuMI CCSGG 2 cut(s) 476, 1192
BsaBI GATNNNNATC 2 cut(s) 755, 1042
BsaJI CCNNGG 4 cut(s) 797, 972, 1000, 1124
BsaWI WCCGGW 2 cut(s) 364, 959
BsaXI ACNNNNNCTCC 7 cut(s) 26, 470, 500, 705, 735, 840, 870
Bsc4I CCNNNNNNNGG 5 cut(s) 463, 488, 532, 654, 978
Bse118I RCCGGY 1 cut(s) 217
Bse1I ACTGG 4 cut(s) 168, 299, 313, 897
Bse3DI GCAATG 1 cut(s) 1167
Bse8I GATNNNNATC 2 cut(s) 755, 1042
BseBI CCWGG 3 cut(s) 464, 885, 1125
BseDI CCNNGG 4 cut(s) 797, 972, 1000, 1124
BseGI GGATG 2 cut(s) 216, 274
BseJI GATNNNNATC 2 cut(s) 755, 1042
BseLI CCNNNNNNNGG 5 cut(s) 463, 488, 532, 654, 978
BseMI GCAATG 1 cut(s) 1167
BseMII CTCAG 3 cut(s) 275, 853, 939
BseNI ACTGG 4 cut(s) 168, 299, 313, 897
BseXI GCAGC 2 cut(s) 578, 1159
BseYI CCCAGC 1 cut(s) 205
BsgI GTGCAG 1 cut(s) 834
Bsh1236I CGCG 2 cut(s) 808, 810
BshFI GGCC 3 cut(s) 9, 697, 742
BshNI GGYRCC 1 cut(s) 891
BsiHKAI GWGCWC 1 cut(s) 576
BsiHKCI CYCGRG 1 cut(s) 103
BsiSI CCGG 6 cut(s) 218, 365, 476, 489, 960, 1191
BslFI GGGAC 2 cut(s) 142, 1178
BslI CCNNNNNNNGG 5 cut(s) 463, 488, 532, 654, 978
BsmAI GTCTC 4 cut(s) 106, 366, 621, 708
BsmBI CGTCTC 1 cut(s) 708
BsmFI GGGAC 2 cut(s) 142, 1178
BsmI GAATGC 1 cut(s) 995
BsnI GGCC 3 cut(s) 9, 697, 742
BsoBI CYCGRG 1 cut(s) 103
Bsp1286I GDGCHC 3 cut(s) 458, 476, 576
Bsp143I GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
BspACI CCGC 9 cut(s) 315, 536, 539, 569, 614, 806, 810, 941, 1139
BspANI GGCC 3 cut(s) 9, 697, 742
BspCNI CTCAG 3 cut(s) 274, 852, 940
BspFNI CGCG 2 cut(s) 808, 810
BspHI TCATGA 1 cut(s) 241
BspLI GGNNCC 4 cut(s) 216, 348, 480, 893
BspPI GGATC 4 cut(s) 239, 552, 745, 1068
BspT107I GGYRCC 1 cut(s) 891
BsrBI CCGCTC 1 cut(s) 315
BsrDI GCAATG 1 cut(s) 1167
BsrFI RCCGGY 1 cut(s) 217
BsrI ACTGG 4 cut(s) 168, 299, 313, 897
BssAI RCCGGY 1 cut(s) 217
BssECI CCNNGG 4 cut(s) 797, 972, 1000, 1124
BssMI GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
BssSI CACGAG 2 cut(s) 497, 560
BssT1I CCWWGG 3 cut(s) 797, 972, 1000
Bst2BI CACGAG 2 cut(s) 497, 560
Bst2UI CCWGG 3 cut(s) 464, 885, 1125
Bst4CI ACNGT 3 cut(s) 22, 1096, 1135
Bst6I CTCTTC 3 cut(s) 333, 423, 909
BstC8I GCNNGC 2 cut(s) 576, 1011
BstDEI CTNAG 4 cut(s) 261, 674, 839, 948
BstF5I GGATG 2 cut(s) 216, 274
BstFNI CGCG 2 cut(s) 808, 810
BstHHI GCGC 2 cut(s) 810, 1009
BstKTI GATC 9 cut(s) 82, 247, 547, 753, 759, 769, 838, 1052, 1063
BstMAI GTCTC 4 cut(s) 106, 366, 621, 708
BstMBI GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
BstMWI GCNNNNNNNGC 4 cut(s) 38, 223, 575, 889
BstNI CCWGG 3 cut(s) 464, 885, 1125
BstSCI CCNGG 5 cut(s) 462, 474, 883, 1123, 1190
BstUI CGCG 2 cut(s) 808, 810
BstV1I GCAGC 2 cut(s) 578, 1159
BstV2I GAAGAC 1 cut(s) 651
BstX2I RGATCY 1 cut(s) 1049
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 1 cut(s) 1049
BsuRI GGCC 3 cut(s) 9, 697, 742
BtgZI GCGATG 1 cut(s) 1115
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 2 cut(s) 216, 274
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 4 cut(s) 175, 609, 1118, 1140
Cac8I GCNNGC 2 cut(s) 576, 1011
CciI TCATGA 1 cut(s) 241
CfoI GCGC 2 cut(s) 810, 1009
Cfr10I RCCGGY 1 cut(s) 217
Cfr13I GGNCC 4 cut(s) 7, 220, 478, 637
CseI GACGC 3 cut(s) 437, 633, 899
Csp6I GTAC 1 cut(s) 832
CviAII CATG 3 cut(s) 242, 532, 706
CviQI GTAC 1 cut(s) 832
DdeI CTNAG 4 cut(s) 261, 674, 839, 948
DpnI GATC 9 cut(s) 81, 246, 546, 752, 758, 768, 837, 1051, 1062
DpnII GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
DraIII CACNNNGTG 1 cut(s) 732
DriI GACNNNNNGTC 1 cut(s) 643
Eam1104I CTCTTC 3 cut(s) 333, 423, 909
Eam1105I GACNNNNNGTC 1 cut(s) 643
EarI CTCTTC 3 cut(s) 333, 423, 909
EciI GGCGGA 1 cut(s) 554
Eco130I CCWWGG 3 cut(s) 797, 972, 1000
Eco147I AGGCCT 1 cut(s) 697
Eco24I GRGCYC 2 cut(s) 458, 476
Eco32I GATATC 2 cut(s) 984, 1044
Eco47I GGWCC 3 cut(s) 220, 478, 637
Eco57I CTGAAG 1 cut(s) 254
Eco88I CYCGRG 1 cut(s) 103
EcoO109I RGGNCCY 2 cut(s) 7, 637
EcoRII CCWGG 3 cut(s) 462, 883, 1123
EcoRV GATATC 2 cut(s) 984, 1044
EcoT14I CCWWGG 3 cut(s) 797, 972, 1000
EcoT38I GRGCYC 2 cut(s) 458, 476
ErhI CCWWGG 3 cut(s) 797, 972, 1000
Esp3I CGTCTC 1 cut(s) 708
FaeI CATG 3 cut(s) 245, 535, 709
FaiI YATR 6 cut(s) 243, 533, 707, 749, 1069, 1185
FaqI GGGAC 2 cut(s) 142, 1178
FatI CATG 3 cut(s) 241, 531, 705
FauI CCCGC 1 cut(s) 308
FblI GTMKAC 1 cut(s) 723
Fnu4HI GCNGC 5 cut(s) 537, 567, 806, 942, 1173
FokI GGATG 2 cut(s) 223, 281
FriOI GRGCYC 2 cut(s) 458, 476
Fsp4HI GCNGC 5 cut(s) 537, 567, 806, 942, 1173
FspBI CTAG 4 cut(s) 153, 528, 798, 1035
FspI TGCGCA 1 cut(s) 1008
GlaI GCGC 2 cut(s) 809, 1008
GluI GCNGC 5 cut(s) 537, 567, 806, 942, 1173
GsaI CCCAGC 1 cut(s) 209
GsuI CTGGAG 1 cut(s) 180
HaeIII GGCC 3 cut(s) 9, 697, 742
HapII CCGG 6 cut(s) 218, 365, 476, 489, 960, 1191
HgaI GACGC 3 cut(s) 437, 633, 899
HhaI GCGC 2 cut(s) 810, 1009
Hin1II CATG 3 cut(s) 245, 535, 709
Hin6I GCGC 2 cut(s) 808, 1007
HinP1I GCGC 2 cut(s) 808, 1007
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 2 cut(s) 295, 359
HpaII CCGG 6 cut(s) 218, 365, 476, 489, 960, 1191
HphI GGTGA 5 cut(s) 703, 868, 887, 934, 1141
Hpy166II GTNNAC 2 cut(s) 724, 955
Hpy188III TCNNGA 7 cut(s) 178, 242, 332, 754, 1035, 1047, 1058
Hpy8I GTNNAC 2 cut(s) 724, 955
HpyAV CCTTC 3 cut(s) 846, 928, 1188
HpyCH4III ACNGT 3 cut(s) 22, 1096, 1135
HpyCH4IV ACGT 1 cut(s) 717
HpyCH4V TGCA 4 cut(s) 226, 371, 590, 815
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 223, 575, 889
HpyF3I CTNAG 4 cut(s) 261, 674, 839, 948
HpySE526I ACGT 1 cut(s) 717
Hsp92II CATG 3 cut(s) 245, 535, 709
HspAI GCGC 2 cut(s) 808, 1007
Kzo9I GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
LmnI GCTCC 7 cut(s) 214, 312, 352, 466, 502, 616, 1180
Lsp1109I GCAGC 2 cut(s) 578, 1159
LweI GCATC 3 cut(s) 577, 613, 1034
MaeI CTAG 4 cut(s) 153, 528, 798, 1035
MaeII ACGT 1 cut(s) 717
MaeIII GTNAC 3 cut(s) 772, 856, 1129
MalI GATC 9 cut(s) 81, 246, 546, 752, 758, 768, 837, 1051, 1062
MbiI CCGCTC 1 cut(s) 315
MboI GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
MflI RGATCY 1 cut(s) 1049
MhlI GDGCHC 3 cut(s) 458, 476, 576
MluCI AATT 2 cut(s) 915, 967
MlyI GAGTC 2 cut(s) 304, 368
MmeI TCCRAC 2 cut(s) 90, 604
MseI TTAA 2 cut(s) 822, 1107
MspA1I CMGCKG 3 cut(s) 205, 232, 569
MspI CCGG 6 cut(s) 218, 365, 476, 489, 960, 1191
MspR9I CCNGG 5 cut(s) 464, 476, 885, 1125, 1192
Mva1269I GAATGC 1 cut(s) 995
MvaI CCWGG 3 cut(s) 464, 885, 1125
MvnI CGCG 2 cut(s) 808, 810
MwoI GCNNNNNNNGC 4 cut(s) 38, 223, 575, 889
NciI CCSGG 2 cut(s) 476, 1192
NdeII GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
NlaIII CATG 3 cut(s) 245, 535, 709
NlaIV GGNNCC 4 cut(s) 216, 348, 480, 893
NmuCI GTSAC 2 cut(s) 856, 1129
NsbI TGCGCA 1 cut(s) 1008
PagI TCATGA 1 cut(s) 241
PceI AGGCCT 1 cut(s) 697
PctI GAATGC 1 cut(s) 995
PflFI GACNNNGTC 2 cut(s) 447, 719
PflMI CCANNNNNTGG 1 cut(s) 978
PkrI GCNGC 5 cut(s) 538, 568, 807, 943, 1174
PleI GAGTC 2 cut(s) 303, 367
PpsI GAGTC 2 cut(s) 303, 367
PpuMI RGGWCCY 1 cut(s) 637
PshBI ATTAAT 1 cut(s) 1107
Psp5II RGGWCCY 1 cut(s) 637
Psp6I CCWGG 3 cut(s) 462, 883, 1123
PspFI CCCAGC 1 cut(s) 205
PspGI CCWGG 3 cut(s) 462, 883, 1123
PspN4I GGNNCC 4 cut(s) 216, 348, 480, 893
PspPI GGNCC 4 cut(s) 7, 220, 478, 637
PspPPI RGGWCCY 1 cut(s) 637
PsuI RGATCY 1 cut(s) 1049
PsyI GACNNNGTC 2 cut(s) 447, 719
PvuII CAGCTG 2 cut(s) 205, 232
RsaI GTAC 1 cut(s) 833
RsaNI GTAC 1 cut(s) 832
SaqAI TTAA 2 cut(s) 822, 1107
SatI GCNGC 5 cut(s) 537, 567, 806, 942, 1173
Sau3AI GATC 9 cut(s) 79, 244, 544, 750, 756, 766, 835, 1049, 1060
Sau96I GGNCC 4 cut(s) 7, 220, 478, 637
SchI GAGTC 2 cut(s) 304, 368
ScrFI CCNGG 5 cut(s) 464, 476, 885, 1125, 1192
SduI GDGCHC 3 cut(s) 458, 476, 576
SfaNI GCATC 3 cut(s) 577, 613, 1034
SinI GGWCC 3 cut(s) 220, 478, 637
SmlI CTYRAG 1 cut(s) 178
SmoI CTYRAG 1 cut(s) 178
Sse9I AATT 2 cut(s) 915, 967
SseBI AGGCCT 1 cut(s) 697
SsiI CCGC 9 cut(s) 315, 536, 539, 569, 614, 806, 810, 941, 1139
SspI AATATT 1 cut(s) 328
SspMI CTAG 4 cut(s) 153, 528, 798, 1035
StuI AGGCCT 1 cut(s) 697
StyD4I CCNGG 5 cut(s) 462, 474, 883, 1123, 1190
StyI CCWWGG 3 cut(s) 797, 972, 1000
TaaI ACNGT 3 cut(s) 22, 1096, 1135
TaiI ACGT 1 cut(s) 720
TaqI TCGA 3 cut(s) 278, 331, 594
TasI AATT 2 cut(s) 915, 967
TauI GCSGC 3 cut(s) 539, 808, 944
Tru1I TTAA 2 cut(s) 822, 1107
Tru9I TTAA 2 cut(s) 822, 1107
TscAI CASTG 4 cut(s) 175, 616, 1118, 1140
TseFI GTSAC 2 cut(s) 856, 1129
TseI GCWGC 2 cut(s) 566, 1172
Tsp45I GTSAC 2 cut(s) 856, 1129
TspDTI ATGAA 1 cut(s) 699
TspGWI ACGGA 2 cut(s) 151, 726
TspRI CASTG 4 cut(s) 175, 616, 1118, 1140
Tth111I GACNNNGTC 2 cut(s) 447, 719
Van91I CCANNNNNTGG 1 cut(s) 978
VpaK11BI GGWCC 3 cut(s) 220, 478, 637
VspI ATTAAT 1 cut(s) 1107
XbaI TCTAGA 1 cut(s) 1034
XcmI CCANNNNNNNNNTGG 1 cut(s) 1054
XmaJI CCTAGG 1 cut(s) 797
XmiI GTMKAC 1 cut(s) 723
XspI CTAG 4 cut(s) 153, 528, 798, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.