Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 356 |
| AccBSI | CCGCTC | 1 cut(s) | 500 |
| AciI | CCGC | 1 cut(s) | 498 |
| AcyI | GRCGYC | 1 cut(s) | 602 |
| AfaI | GTAC | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 522 |
| AgsI | TTSAA | 3 cut(s) | 91, 194, 307 |
| AjnI | CCWGG | 1 cut(s) | 145 |
| Alw26I | GTCTC | 1 cut(s) | 534 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 80, 512 |
| AoxI | GGCC | 4 cut(s) | 126, 337, 495, 579 |
| ApeKI | GCWGC | 1 cut(s) | 80 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 613 |
| AspA2I | CCTAGG | 1 cut(s) | 451 |
| AspLEI | GCGC | 1 cut(s) | 357 |
| AspS9I | GGNCC | 5 cut(s) | 127, 230, 337, 579, 645 |
| AsuHPI | GGTGA | 2 cut(s) | 145, 499 |
| AvaII | GGWCC | 2 cut(s) | 230, 645 |
| AvrII | CCTAGG | 1 cut(s) | 451 |
| BanII | GRGCYC | 1 cut(s) | 153 |
| BauI | CACGAG | 1 cut(s) | 640 |
| BbvI | GCAGC | 1 cut(s) | 67 |
| BccI | CCATC | 4 cut(s) | 44, 58, 269, 561 |
| BceAI | ACGGC | 2 cut(s) | 286, 652 |
| BciT130I | CCWGG | 1 cut(s) | 147 |
| BclI | TGATCA | 1 cut(s) | 471 |
| BcoDI | GTCTC | 1 cut(s) | 534 |
| BfaI | CTAG | 2 cut(s) | 452, 621 |
| BisI | GCNGC | 2 cut(s) | 81, 498 |
| BlnI | CCTAGG | 1 cut(s) | 451 |
| BlsI | GCNGC | 2 cut(s) | 82, 499 |
| Bme1390I | CCNGG | 1 cut(s) | 147 |
| Bme18I | GGWCC | 2 cut(s) | 230, 645 |
| BmgT120I | GGNCC | 5 cut(s) | 127, 230, 337, 579, 645 |
| BmiI | GGNNCC | 3 cut(s) | 129, 231, 580 |
| BmrFI | CCNGG | 1 cut(s) | 147 |
| BmrI | ACTGGG | 1 cut(s) | 118 |
| BmsI | GCATC | 2 cut(s) | 61, 154 |
| BmuI | ACTGGG | 1 cut(s) | 118 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 623, 655 |
| Bsa29I | ATCGAT | 1 cut(s) | 39 |
| BsaBI | GATNNNNATC | 1 cut(s) | 470 |
| BsaHI | GRCGYC | 1 cut(s) | 602 |
| BsaJI | CCNNGG | 4 cut(s) | 146, 233, 451, 516 |
| BsaWI | WCCGGW | 1 cut(s) | 286 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 522 |
| Bse1I | ACTGG | 2 cut(s) | 113, 602 |
| Bse8I | GATNNNNATC | 1 cut(s) | 470 |
| BseBI | CCWGG | 1 cut(s) | 147 |
| BseCI | ATCGAT | 1 cut(s) | 39 |
| BseDI | CCNNGG | 4 cut(s) | 146, 233, 451, 516 |
| BseGI | GGATG | 3 cut(s) | 32, 76, 461 |
| BseJI | GATNNNNATC | 1 cut(s) | 470 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 522 |
| BseMII | CTCAG | 1 cut(s) | 552 |
| BseNI | ACTGG | 2 cut(s) | 113, 602 |
| BseXI | GCAGC | 1 cut(s) | 67 |
| BseYI | CCCAGC | 1 cut(s) | 521 |
| BshFI | GGCC | 4 cut(s) | 128, 339, 497, 581 |
| BshVI | ATCGAT | 1 cut(s) | 39 |
| BsiSI | CCGG | 2 cut(s) | 287, 563 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 522 |
| BsmAI | GTCTC | 1 cut(s) | 534 |
| BsnI | GGCC | 4 cut(s) | 128, 339, 497, 581 |
| Bsp1286I | GDGCHC | 1 cut(s) | 153 |
| Bsp143I | GATC | 1 cut(s) | 471 |
| Bsp19I | CCATGG | 1 cut(s) | 516 |
| BspACI | CCGC | 1 cut(s) | 498 |
| BspANI | GGCC | 4 cut(s) | 128, 339, 497, 581 |
| BspCNI | CTCAG | 1 cut(s) | 551 |
| BspDI | ATCGAT | 1 cut(s) | 39 |
| BspLI | GGNNCC | 3 cut(s) | 129, 231, 580 |
| BsrBI | CCGCTC | 1 cut(s) | 500 |
| BsrI | ACTGG | 2 cut(s) | 113, 602 |
| BssECI | CCNNGG | 4 cut(s) | 146, 233, 451, 516 |
| BssMI | GATC | 1 cut(s) | 471 |
| BssNI | GRCGYC | 1 cut(s) | 602 |
| BssSI | CACGAG | 1 cut(s) | 640 |
| BssT1I | CCWWGG | 3 cut(s) | 233, 451, 516 |
| Bst2BI | CACGAG | 1 cut(s) | 640 |
| Bst2UI | CCWGG | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 1 cut(s) | 550 |
| BstACI | GRCGYC | 1 cut(s) | 602 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 80 |
| BstDEI | CTNAG | 2 cut(s) | 538, 583 |
| BstDSI | CCRYGG | 1 cut(s) | 516 |
| BstF5I | GGATG | 3 cut(s) | 32, 76, 461 |
| BstHHI | GCGC | 1 cut(s) | 357 |
| BstKTI | GATC | 1 cut(s) | 474 |
| BstMAI | GTCTC | 1 cut(s) | 534 |
| BstMBI | GATC | 1 cut(s) | 471 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 506 |
| BstNI | CCWGG | 1 cut(s) | 147 |
| BstSCI | CCNGG | 1 cut(s) | 145 |
| BstV1I | GCAGC | 1 cut(s) | 67 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 43, 259 |
| Bsu15I | ATCGAT | 1 cut(s) | 39 |
| BsuRI | GGCC | 4 cut(s) | 128, 339, 497, 581 |
| BsuTUI | ATCGAT | 1 cut(s) | 39 |
| BtgI | CCRYGG | 1 cut(s) | 516 |
| BtsCI | GGATG | 3 cut(s) | 32, 76, 461 |
| BtsI | GCAGTG | 3 cut(s) | 210, 303, 566 |
| BtsIMutI | CAGTG | 3 cut(s) | 210, 303, 566 |
| CaiI | CAGNNNCTG | 2 cut(s) | 80, 512 |
| CfoI | GCGC | 1 cut(s) | 357 |
| Cfr13I | GGNCC | 5 cut(s) | 127, 230, 337, 579, 645 |
| ClaI | ATCGAT | 1 cut(s) | 39 |
| CseI | GACGC | 2 cut(s) | 498, 610 |
| Csp6I | GTAC | 1 cut(s) | 106 |
| CviAII | CATG | 4 cut(s) | 224, 253, 517, 572 |
| CviQI | GTAC | 1 cut(s) | 106 |
| DdeI | CTNAG | 2 cut(s) | 538, 583 |
| DpnI | GATC | 1 cut(s) | 473 |
| DpnII | GATC | 1 cut(s) | 471 |
| Eco130I | CCWWGG | 3 cut(s) | 233, 451, 516 |
| Eco24I | GRGCYC | 1 cut(s) | 153 |
| Eco47I | GGWCC | 2 cut(s) | 230, 645 |
| EcoO109I | RGGNCCY | 3 cut(s) | 230, 337, 579 |
| EcoRII | CCWGG | 1 cut(s) | 145 |
| EcoT14I | CCWWGG | 3 cut(s) | 233, 451, 516 |
| EcoT38I | GRGCYC | 1 cut(s) | 153 |
| ErhI | CCWWGG | 3 cut(s) | 233, 451, 516 |
| FaeI | CATG | 4 cut(s) | 227, 256, 520, 575 |
| FatI | CATG | 4 cut(s) | 223, 252, 516, 571 |
| FbaI | TGATCA | 1 cut(s) | 471 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 498 |
| FokI | GGATG | 3 cut(s) | 19, 83, 468 |
| FriOI | GRGCYC | 1 cut(s) | 153 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 498 |
| FspBI | CTAG | 2 cut(s) | 452, 621 |
| FspI | TGCGCA | 1 cut(s) | 356 |
| GlaI | GCGC | 1 cut(s) | 356 |
| GluI | GCNGC | 2 cut(s) | 81, 498 |
| GsaI | CCCAGC | 1 cut(s) | 525 |
| HaeIII | GGCC | 4 cut(s) | 128, 339, 497, 581 |
| HapII | CCGG | 2 cut(s) | 287, 563 |
| HgaI | GACGC | 2 cut(s) | 498, 610 |
| HhaI | GCGC | 1 cut(s) | 357 |
| Hin1I | GRCGYC | 1 cut(s) | 602 |
| Hin1II | CATG | 4 cut(s) | 227, 256, 520, 575 |
| Hin6I | GCGC | 1 cut(s) | 355 |
| HinP1I | GCGC | 1 cut(s) | 355 |
| HincII | GTYRAC | 1 cut(s) | 546 |
| HindII | GTYRAC | 1 cut(s) | 546 |
| HinfI | GANTC | 2 cut(s) | 47, 490 |
| HpaII | CCGG | 2 cut(s) | 287, 563 |
| HphI | GGTGA | 2 cut(s) | 145, 499 |
| Hpy166II | GTNNAC | 2 cut(s) | 546, 595 |
| Hpy188I | TCNGA | 2 cut(s) | 476, 534 |
| Hpy8I | GTNNAC | 2 cut(s) | 546, 595 |
| HpyAV | CCTTC | 5 cut(s) | 350, 397, 400, 475, 569 |
| HpyCH4III | ACNGT | 1 cut(s) | 550 |
| HpyCH4V | TGCA | 5 cut(s) | 74, 167, 208, 223, 571 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 506 |
| HpyF3I | CTNAG | 2 cut(s) | 538, 583 |
| Hsp92I | GRCGYC | 1 cut(s) | 602 |
| Hsp92II | CATG | 4 cut(s) | 227, 256, 520, 575 |
| HspAI | GCGC | 1 cut(s) | 355 |
| Ksp22I | TGATCA | 1 cut(s) | 471 |
| Kzo9I | GATC | 1 cut(s) | 471 |
| LmnI | GCTCC | 2 cut(s) | 172, 505 |
| Lsp1109I | GCAGC | 1 cut(s) | 67 |
| LweI | GCATC | 2 cut(s) | 61, 154 |
| MaeI | CTAG | 2 cut(s) | 452, 621 |
| MaeIII | GTNAC | 1 cut(s) | 58 |
| MalI | GATC | 1 cut(s) | 473 |
| MbiI | CCGCTC | 1 cut(s) | 500 |
| MboI | GATC | 1 cut(s) | 471 |
| MfeI | CAATTG | 1 cut(s) | 649 |
| MhlI | GDGCHC | 1 cut(s) | 153 |
| MluCI | AATT | 5 cut(s) | 188, 374, 383, 613, 649 |
| MnlI | CCTC | 3 cut(s) | 88, 286, 478 |
| MroXI | GAANNNNTTC | 1 cut(s) | 613 |
| MseI | TTAA | 1 cut(s) | 333 |
| MslI | CAYNNNNRTG | 1 cut(s) | 257 |
| MspI | CCGG | 2 cut(s) | 287, 563 |
| MspR9I | CCNGG | 1 cut(s) | 147 |
| MunI | CAATTG | 1 cut(s) | 649 |
| MvaI | CCWGG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 506 |
| NcoI | CCATGG | 1 cut(s) | 516 |
| NdeII | GATC | 1 cut(s) | 471 |
| NlaIII | CATG | 4 cut(s) | 227, 256, 520, 575 |
| NlaIV | GGNNCC | 3 cut(s) | 129, 231, 580 |
| NmeAIII | GCCGAG | 1 cut(s) | 630 |
| NsbI | TGCGCA | 1 cut(s) | 356 |
| PdmI | GAANNNNTTC | 1 cut(s) | 613 |
| PfeI | GAWTC | 2 cut(s) | 47, 490 |
| PkrI | GCNGC | 2 cut(s) | 82, 499 |
| PpuMI | RGGWCCY | 1 cut(s) | 230 |
| Psp5II | RGGWCCY | 1 cut(s) | 230 |
| Psp6I | CCWGG | 1 cut(s) | 145 |
| PspFI | CCCAGC | 1 cut(s) | 521 |
| PspGI | CCWGG | 1 cut(s) | 145 |
| PspN4I | GGNNCC | 3 cut(s) | 129, 231, 580 |
| PspPI | GGNCC | 5 cut(s) | 127, 230, 337, 579, 645 |
| PspPPI | RGGWCCY | 1 cut(s) | 230 |
| PstNI | CAGNNNCTG | 2 cut(s) | 80, 512 |
| RsaI | GTAC | 1 cut(s) | 107 |
| RsaNI | GTAC | 1 cut(s) | 106 |
| RseI | CAYNNNNRTG | 1 cut(s) | 257 |
| SaqAI | TTAA | 1 cut(s) | 333 |
| SatI | GCNGC | 2 cut(s) | 81, 498 |
| Sau3AI | GATC | 1 cut(s) | 471 |
| Sau96I | GGNCC | 5 cut(s) | 127, 230, 337, 579, 645 |
| ScrFI | CCNGG | 1 cut(s) | 147 |
| SduI | GDGCHC | 1 cut(s) | 153 |
| SetI | ASST | 2 cut(s) | 408, 489 |
| SfaNI | GCATC | 2 cut(s) | 61, 154 |
| SinI | GGWCC | 2 cut(s) | 230, 645 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 257 |
| Sse9I | AATT | 5 cut(s) | 188, 374, 383, 613, 649 |
| SsiI | CCGC | 1 cut(s) | 498 |
| SspMI | CTAG | 2 cut(s) | 452, 621 |
| StyD4I | CCNGG | 1 cut(s) | 145 |
| StyI | CCWWGG | 3 cut(s) | 233, 451, 516 |
| TaaI | ACNGT | 1 cut(s) | 550 |
| TaqI | TCGA | 2 cut(s) | 39, 372 |
| TasI | AATT | 5 cut(s) | 188, 374, 383, 613, 649 |
| TauI | GCSGC | 1 cut(s) | 500 |
| TfiI | GAWTC | 2 cut(s) | 47, 490 |
| Tru1I | TTAA | 1 cut(s) | 333 |
| Tru9I | TTAA | 1 cut(s) | 333 |
| TscAI | CASTG | 3 cut(s) | 210, 303, 573 |
| TseI | GCWGC | 1 cut(s) | 80 |
| TspDTI | ATGAA | 4 cut(s) | 21, 382, 427, 588 |
| TspRI | CASTG | 3 cut(s) | 210, 303, 573 |
| VpaK11BI | GGWCC | 2 cut(s) | 230, 645 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 259 |
| XmaJI | CCTAGG | 1 cut(s) | 451 |
| XmnI | GAANNNNTTC | 1 cut(s) | 613 |
| XspI | CTAG | 2 cut(s) | 452, 621 |