Rmu_sc0015359.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015359.1
OG0000049
Physical Location & Seq
Reverse (-)
2357 .. 3100
744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015359.1_g000002.1.cds

Sequence Viewer

Length: 744 bp
atggcacagacttctaccggtgttatggctgttcgtcctccttctgattccgcaagggtgtcgttgggtaaggcggggcaggtagcgctacaagacaacaactggtatatggtcgggcgactgcttggatcaaagtcgcggtttcccaggtttaaaggaaccattgcttccatctggcgtctcaagtccggcctctctgttcatgatgccggagatcgattccttttccaattcactcatgaagctgatcgtaatagagcgttgcatggagggtcgtggttctacaggaacacgatgctgctggtaggggaatatgatggagttggcgcgttggagagggttcctttgtgggagatggagatctggattgcggtcaaaggtttgccattggcatttcgaaacaagcatgccttaaccctaattggatctgccgtcggtcaggttattagatttgatcaattggctcttcgtaggaaagaggaggagcagagaatcagattggtgttggatactcgtcggagggcacgtacttggatgcttttcgagttctctcccacggtgcagcctgagattactatcatttatgagaaagttaagggattatgcagggattgcggcttgtttgagcatgaggcctcggggtgtgatggtttttttgatgcaagagaagggagaaattcagaatgggccaccgaaagcggcgatggccggtctgtcgttggaagtgggtgctttccctcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

247

Amino Acids

27.79

Weight (kDa)

9.32

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 70
AccII CGCG 2 cut(s) 139, 329
AciI CCGC 6 cut(s) 51, 74, 139, 371, 615, 699
AclWI GGATC 2 cut(s) 136, 433
AcoI YGGCCR 1 cut(s) 706
AcsI RAATTY 1 cut(s) 676
AcyI GRCGYC 1 cut(s) 178
AfaI GTAC 1 cut(s) 529
AfeI AGCGCT 1 cut(s) 87
AgeI ACCGGT 1 cut(s) 17
AjnI CCWGG 1 cut(s) 146
AluBI AGCT 1 cut(s) 245
AluI AGCT 1 cut(s) 245
Alw26I GTCTC 1 cut(s) 185
AlwI GGATC 2 cut(s) 136, 433
Ama87I CYCGRG 1 cut(s) 637
Aor51HI AGCGCT 1 cut(s) 87
AoxI GGCC 4 cut(s) 190, 633, 687, 706
ApeKI GCWGC 2 cut(s) 298, 562
ApoI RAATTY 1 cut(s) 676
AsiGI ACCGGT 1 cut(s) 17
AspLEI GCGC 2 cut(s) 88, 329
AspS9I GGNCC 1 cut(s) 687
AsuII TTCGAA 1 cut(s) 397
AvaI CYCGRG 1 cut(s) 637
BaeGI GKGCMC 1 cut(s) 526
BbvI GCAGC 2 cut(s) 285, 574
BccI CCATC 5 cut(s) 179, 311, 349, 641, 698
BceAI ACGGC 1 cut(s) 416
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BciT130I CCWGG 1 cut(s) 148
BciVI GTATCC 1 cut(s) 502
BclI TGATCA 1 cut(s) 454
BcoDI GTCTC 1 cut(s) 185
BfmI CTRYAG 1 cut(s) 283
BfoI RGCGCY 1 cut(s) 89
BfuAI ACCTGC 1 cut(s) 70
BfuI GTATCC 1 cut(s) 502
BglII AGATCT 1 cut(s) 360
BisI GCNGC 4 cut(s) 299, 563, 616, 700
BlsI GCNGC 4 cut(s) 300, 564, 617, 701
Bme1390I CCNGG 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 637
BmgT120I GGNCC 1 cut(s) 687
BmiI GGNNCC 2 cut(s) 160, 342
BmrFI CCNGG 1 cut(s) 148
BmsI GCATC 4 cut(s) 196, 285, 525, 649
Bpu14I TTCGAA 1 cut(s) 397
BpuEI CTTGAG 1 cut(s) 167
Bsa29I ATCGAT 1 cut(s) 217
BsaAI YACGTR 1 cut(s) 527
BsaBI GATNNNNATC 2 cut(s) 359, 575
BsaHI GRCGYC 1 cut(s) 178
BsaJI CCNNGG 3 cut(s) 146, 555, 636
BsaWI WCCGGW 1 cut(s) 17
BsaXI ACNNNNNCTCC 2 cut(s) 511, 541
Bse118I RCCGGY 2 cut(s) 17, 708
Bse1I ACTGG 1 cut(s) 107
Bse3DI GCAATG 1 cut(s) 162
Bse8I GATNNNNATC 2 cut(s) 359, 575
BseBI CCWGG 1 cut(s) 148
BseCI ATCGAT 1 cut(s) 217
BseDI CCNNGG 3 cut(s) 146, 555, 636
BseGI GGATG 1 cut(s) 540
BseJI GATNNNNATC 2 cut(s) 359, 575
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 558
BseNI ACTGG 1 cut(s) 107
BseRI GAGGAG 2 cut(s) 494, 497
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 2 cut(s) 285, 574
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 2 cut(s) 139, 329
BshFI GGCC 4 cut(s) 192, 635, 689, 708
BshTI ACCGGT 1 cut(s) 17
BshVI ATCGAT 1 cut(s) 217
BsiHKCI CYCGRG 1 cut(s) 637
BsiSI CCGG 4 cut(s) 18, 189, 210, 709
BsmAI GTCTC 1 cut(s) 185
BsmBI CGTCTC 1 cut(s) 185
BsnI GGCC 4 cut(s) 192, 635, 689, 708
BsoBI CYCGRG 1 cut(s) 637
Bsp119I TTCGAA 1 cut(s) 397
Bsp1286I GDGCHC 1 cut(s) 526
Bsp143I GATC 6 cut(s) 128, 214, 247, 360, 425, 454
BspACI CCGC 6 cut(s) 51, 74, 139, 371, 615, 699
BspANI GGCC 4 cut(s) 192, 635, 689, 708
BspCNI CTCAG 1 cut(s) 559
BspDI ATCGAT 1 cut(s) 217
BspFNI CGCG 2 cut(s) 139, 329
BspHI TCATGA 2 cut(s) 202, 238
BspLI GGNNCC 2 cut(s) 160, 342
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 2 cut(s) 136, 433
BspQI GCTCTTC 1 cut(s) 471
BspT104I TTCGAA 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 162
BsrFI RCCGGY 2 cut(s) 17, 708
BsrI ACTGG 1 cut(s) 107
BssAI RCCGGY 2 cut(s) 17, 708
BssECI CCNNGG 3 cut(s) 146, 555, 636
BssMI GATC 6 cut(s) 128, 214, 247, 360, 425, 454
BssNI GRCGYC 1 cut(s) 178
Bst2UI CCWGG 1 cut(s) 148
Bst4CI ACNGT 1 cut(s) 559
Bst6I CTCTTC 1 cut(s) 471
BstACI GRCGYC 1 cut(s) 178
BstAPI GCANNNNNTGC 1 cut(s) 612
BstBAI YACGTR 1 cut(s) 527
BstBI TTCGAA 1 cut(s) 397
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 1 cut(s) 567
BstDSI CCRYGG 1 cut(s) 555
BstF5I GGATG 1 cut(s) 540
BstFNI CGCG 2 cut(s) 139, 329
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 2 cut(s) 88, 329
BstKTI GATC 6 cut(s) 131, 217, 250, 363, 428, 457
BstMAI GTCTC 1 cut(s) 185
BstMBI GATC 6 cut(s) 128, 214, 247, 360, 425, 454
BstMWI GCNNNNNNNGC 3 cut(s) 85, 612, 705
BstNI CCWGG 1 cut(s) 148
BstNSI RCATGY 1 cut(s) 410
BstSCI CCNGG 1 cut(s) 146
BstSFI CTRYAG 1 cut(s) 283
BstSLI GKGCMC 1 cut(s) 526
BstUI CGCG 2 cut(s) 139, 329
BstV1I GCAGC 2 cut(s) 285, 574
BstX2I RGATCY 2 cut(s) 360, 425
BstYI RGATCY 2 cut(s) 360, 425
Bsu15I ATCGAT 1 cut(s) 217
BsuI GTATCC 1 cut(s) 502
BsuRI GGCC 4 cut(s) 192, 635, 689, 708
BsuTUI ATCGAT 1 cut(s) 217
BtgI CCRYGG 1 cut(s) 555
BtgZI GCGATG 1 cut(s) 717
BtsCI GGATG 1 cut(s) 540
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 1 cut(s) 408
CciI TCATGA 2 cut(s) 202, 238
CfoI GCGC 2 cut(s) 88, 329
Cfr10I RCCGGY 2 cut(s) 17, 708
Cfr13I GGNCC 1 cut(s) 687
ClaI ATCGAT 1 cut(s) 217
CseI GACGC 1 cut(s) 167
Csp6I GTAC 1 cut(s) 528
CspAI ACCGGT 1 cut(s) 17
CviAII CATG 5 cut(s) 203, 239, 266, 407, 629
CviJI RGCY 9 cut(s) 29, 192, 245, 464, 565, 618, 635, 689, 708
CviKI_1 RGCY 9 cut(s) 29, 192, 245, 464, 565, 618, 635, 689, 708
CviQI GTAC 1 cut(s) 528
DdeI CTNAG 1 cut(s) 567
DpnI GATC 6 cut(s) 130, 216, 249, 362, 427, 456
DpnII GATC 6 cut(s) 128, 214, 247, 360, 425, 454
DraI TTTAAA 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 706
Eam1104I CTCTTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 471
Eco147I AGGCCT 1 cut(s) 635
Eco47III AGCGCT 1 cut(s) 87
Eco88I CYCGRG 1 cut(s) 637
EcoRII CCWGG 1 cut(s) 146
Esp3I CGTCTC 1 cut(s) 185
FaeI CATG 5 cut(s) 206, 242, 269, 410, 632
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FatI CATG 5 cut(s) 202, 238, 265, 406, 628
FauI CCCGC 1 cut(s) 67
FbaI TGATCA 1 cut(s) 454
Fnu4HI GCNGC 4 cut(s) 299, 563, 616, 700
FokI GGATG 1 cut(s) 547
Fsp4HI GCNGC 4 cut(s) 299, 563, 616, 700
GlaI GCGC 2 cut(s) 87, 328
GluI GCNGC 4 cut(s) 299, 563, 616, 700
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 4 cut(s) 192, 635, 689, 708
HapII CCGG 4 cut(s) 18, 189, 210, 709
HgaI GACGC 1 cut(s) 167
HhaI GCGC 2 cut(s) 88, 329
Hin1I GRCGYC 1 cut(s) 178
Hin1II CATG 5 cut(s) 206, 242, 269, 410, 632
Hin6I GCGC 2 cut(s) 86, 327
HinP1I GCGC 2 cut(s) 86, 327
HinfI GANTC 3 cut(s) 47, 219, 492
HpaII CCGG 4 cut(s) 18, 189, 210, 709
Hpy188I TCNGA 4 cut(s) 46, 497, 519, 682
Hpy188III TCNNGA 4 cut(s) 203, 239, 364, 741
Hpy99I CGWCG 2 cut(s) 437, 519
HpyAV CCTTC 2 cut(s) 51, 662
HpyCH4III ACNGT 1 cut(s) 559
HpyCH4IV ACGT 1 cut(s) 526
HpyCH4V TGCA 4 cut(s) 265, 562, 606, 662
HpyF10VI GCNNNNNNNGC 3 cut(s) 85, 612, 705
HpyF3I CTNAG 1 cut(s) 567
HpySE526I ACGT 1 cut(s) 526
Hsp92I GRCGYC 1 cut(s) 178
Hsp92II CATG 5 cut(s) 206, 242, 269, 410, 632
HspAI GCGC 2 cut(s) 86, 327
Ksp22I TGATCA 1 cut(s) 454
Kzo9I GATC 6 cut(s) 128, 214, 247, 360, 425, 454
LguI GCTCTTC 1 cut(s) 471
LmnI GCTCC 1 cut(s) 484
Lsp1109I GCAGC 2 cut(s) 285, 574
LweI GCATC 4 cut(s) 196, 285, 525, 649
MaeII ACGT 1 cut(s) 526
MalI GATC 6 cut(s) 130, 216, 249, 362, 427, 456
MboI GATC 6 cut(s) 128, 214, 247, 360, 425, 454
MboII GAAGA 1 cut(s) 458
MfeI CAATTG 1 cut(s) 458
MflI RGATCY 2 cut(s) 360, 425
MhlI GDGCHC 1 cut(s) 526
MluCI AATT 4 cut(s) 230, 420, 458, 676
MmeI TCCRAC 4 cut(s) 312, 486, 497, 700
MnlI CCTC 9 cut(s) 48, 203, 263, 330, 472, 475, 513, 625, 646
MseI TTAA 3 cut(s) 153, 413, 594
MspI CCGG 4 cut(s) 18, 189, 210, 709
MspR9I CCNGG 1 cut(s) 148
MunI CAATTG 1 cut(s) 458
MvaI CCWGG 1 cut(s) 148
MvnI CGCG 2 cut(s) 139, 329
MwoI GCNNNNNNNGC 3 cut(s) 85, 612, 705
NdeII GATC 6 cut(s) 128, 214, 247, 360, 425, 454
NlaIII CATG 5 cut(s) 206, 242, 269, 410, 632
NlaIV GGNNCC 2 cut(s) 160, 342
NspI RCATGY 1 cut(s) 410
NspV TTCGAA 1 cut(s) 397
PaeI GCATGC 1 cut(s) 410
PagI TCATGA 2 cut(s) 202, 238
PceI AGGCCT 1 cut(s) 635
PciSI GCTCTTC 1 cut(s) 471
PcsI WCGNNNNNNNCGW 1 cut(s) 523
PfeI GAWTC 3 cut(s) 47, 219, 492
PinAI ACCGGT 1 cut(s) 17
PkrI GCNGC 4 cut(s) 300, 564, 617, 701
Ppu21I YACGTR 1 cut(s) 527
Psp6I CCWGG 1 cut(s) 146
PspGI CCWGG 1 cut(s) 146
PspN4I GGNNCC 2 cut(s) 160, 342
PspPI GGNCC 1 cut(s) 687
PsuI RGATCY 2 cut(s) 360, 425
RsaI GTAC 1 cut(s) 529
RsaNI GTAC 1 cut(s) 528
SapI GCTCTTC 1 cut(s) 471
SaqAI TTAA 3 cut(s) 153, 413, 594
SatI GCNGC 4 cut(s) 299, 563, 616, 700
Sau3AI GATC 6 cut(s) 128, 214, 247, 360, 425, 454
Sau96I GGNCC 1 cut(s) 687
ScrFI CCNGG 1 cut(s) 148
SduI GDGCHC 1 cut(s) 526
SetI ASST 6 cut(s) 84, 152, 247, 382, 444, 529
SfaNI GCATC 4 cut(s) 196, 285, 525, 649
SfcI CTRYAG 1 cut(s) 283
SfuI TTCGAA 1 cut(s) 397
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SphI GCATGC 1 cut(s) 410
Sse9I AATT 4 cut(s) 230, 420, 458, 676
SseBI AGGCCT 1 cut(s) 635
SsiI CCGC 6 cut(s) 51, 74, 139, 371, 615, 699
StuI AGGCCT 1 cut(s) 635
StyD4I CCNGG 1 cut(s) 146
TaaI ACNGT 1 cut(s) 559
TaiI ACGT 1 cut(s) 529
TaqI TCGA 3 cut(s) 217, 397, 543
TaqII GACCGA 1 cut(s) 425
TasI AATT 4 cut(s) 230, 420, 458, 676
TauI GCSGC 2 cut(s) 618, 702
TfiI GAWTC 3 cut(s) 47, 219, 492
Tru1I TTAA 3 cut(s) 153, 413, 594
Tru9I TTAA 3 cut(s) 153, 413, 594
TseI GCWGC 2 cut(s) 298, 562
TspDTI ATGAA 2 cut(s) 191, 255
XapI RAATTY 1 cut(s) 676
XceI RCATGY 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.