Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 251 |
| AccB1I | GGYRCC | 4 cut(s) | 127, 340, 425, 815 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 174, 928 |
| AccI | GTMKAC | 1 cut(s) | 857 |
| AciI | CCGC | 1 cut(s) | 968 |
| AclWI | GGATC | 9 cut(s) | 266, 462, 517, 530, 905, 913, 918, 994, 1110 |
| AcoI | YGGCCR | 1 cut(s) | 414 |
| AcsI | RAATTY | 2 cut(s) | 1224, 1231 |
| AcyI | GRCGYC | 2 cut(s) | 128, 517 |
| AfaI | GTAC | 3 cut(s) | 107, 160, 1121 |
| AfeI | AGCGCT | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 124, 174, 328, 435, 667, 708, 928, 1330 |
| AflIII | ACRYGT | 1 cut(s) | 1353 |
| AgeI | ACCGGT | 1 cut(s) | 553 |
| AgsI | TTSAA | 5 cut(s) | 154, 751, 940, 1035, 1231 |
| AjiI | CACGTC | 1 cut(s) | 1354 |
| AjnI | CCWGG | 2 cut(s) | 275, 362 |
| AluBI | AGCT | 5 cut(s) | 652, 943, 1279, 1321, 1342 |
| AluI | AGCT | 5 cut(s) | 652, 943, 1279, 1321, 1342 |
| Alw21I | GWGCWC | 1 cut(s) | 1323 |
| Alw26I | GTCTC | 2 cut(s) | 14, 765 |
| AlwI | GGATC | 9 cut(s) | 266, 462, 517, 530, 905, 913, 918, 994, 1110 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| Ama87I | CYCGRG | 1 cut(s) | 724 |
| Aor51HI | AGCGCT | 1 cut(s) | 218 |
| AoxI | GGCC | 5 cut(s) | 115, 319, 360, 414, 686 |
| ApeKI | GCWGC | 4 cut(s) | 71, 80, 83, 1088 |
| ApoI | RAATTY | 2 cut(s) | 1224, 1231 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 31 |
| AsiGI | ACCGGT | 1 cut(s) | 553 |
| AspA2I | CCTAGG | 1 cut(s) | 1004 |
| AspLEI | GCGC | 4 cut(s) | 130, 219, 252, 412 |
| AspS9I | GGNCC | 4 cut(s) | 115, 272, 686, 1063 |
| AsuC2I | CCSGG | 4 cut(s) | 147, 527, 608, 1067 |
| AsuHPI | GGTGA | 5 cut(s) | 543, 571, 928, 1350, 1361 |
| AvaI | CYCGRG | 1 cut(s) | 724 |
| AvaII | GGWCC | 2 cut(s) | 272, 1063 |
| AvrII | CCTAGG | 1 cut(s) | 1004 |
| AxyI | CCTNAGG | 1 cut(s) | 900 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1190, 1223 |
| BalI | TGGCCA | 1 cut(s) | 416 |
| BamHI | GGATCC | 2 cut(s) | 522, 910 |
| BanI | GGYRCC | 4 cut(s) | 127, 340, 425, 815 |
| BanII | GRGCYC | 1 cut(s) | 1323 |
| BauI | CACGAG | 1 cut(s) | 56 |
| Bbv12I | GWGCWC | 1 cut(s) | 1323 |
| BbvCI | CCTCAGC | 1 cut(s) | 944 |
| BbvI | GCAGC | 4 cut(s) | 58, 67, 95, 1075 |
| BccI | CCATC | 5 cut(s) | 89, 311, 436, 1138, 1288 |
| BceAI | ACGGC | 3 cut(s) | 102, 423, 803 |
| BciT130I | CCWGG | 2 cut(s) | 277, 364 |
| BciVI | GTATCC | 1 cut(s) | 1252 |
| BcnI | CCSGG | 4 cut(s) | 147, 527, 608, 1067 |
| BcoDI | GTCTC | 2 cut(s) | 14, 765 |
| BfaI | CTAG | 4 cut(s) | 891, 1005, 1365, 1371 |
| BfmI | CTRYAG | 4 cut(s) | 38, 72, 81, 693 |
| BfoI | RGCGCY | 3 cut(s) | 131, 220, 413 |
| BfuI | GTATCC | 1 cut(s) | 1252 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 368 |
| BisI | GCNGC | 4 cut(s) | 72, 81, 84, 1089 |
| BlnI | CCTAGG | 1 cut(s) | 1004 |
| BlsI | GCNGC | 4 cut(s) | 73, 82, 85, 1090 |
| BmcAI | AGTACT | 1 cut(s) | 1121 |
| Bme1390I | CCNGG | 6 cut(s) | 147, 277, 364, 527, 608, 1067 |
| Bme18I | GGWCC | 2 cut(s) | 272, 1063 |
| BmeT110I | CYCGRG | 1 cut(s) | 724 |
| BmgBI | CACGTC | 1 cut(s) | 1354 |
| BmgT120I | GGNCC | 4 cut(s) | 115, 272, 686, 1063 |
| BmiI | GGNNCC | 9 cut(s) | 129, 274, 342, 427, 524, 817, 912, 951, 1065 |
| BmrFI | CCNGG | 6 cut(s) | 147, 277, 364, 527, 608, 1067 |
| BmrI | ACTGGG | 1 cut(s) | 1278 |
| BmsI | GCATC | 3 cut(s) | 196, 501, 622 |
| BmuI | ACTGGG | 1 cut(s) | 1278 |
| BoxI | GACNNNNGTC | 1 cut(s) | 863 |
| BpmI | CTGGAG | 1 cut(s) | 806 |
| Bpu10I | CCTNAGC | 1 cut(s) | 944 |
| BpuEI | CTTGAG | 1 cut(s) | 1228 |
| BpuMI | CCSGG | 4 cut(s) | 147, 527, 608, 1067 |
| BsaAI | YACGTR | 1 cut(s) | 1202 |
| BsaHI | GRCGYC | 2 cut(s) | 128, 517 |
| BsaWI | WCCGGW | 5 cut(s) | 255, 328, 553, 565, 913 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 779, 809 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 124, 174, 328, 435, 667, 708, 928, 1330 |
| Bse118I | RCCGGY | 1 cut(s) | 553 |
| Bse1I | ACTGG | 3 cut(s) | 107, 643, 1273 |
| Bse21I | CCTNAGG | 1 cut(s) | 900 |
| BseBI | CCWGG | 2 cut(s) | 277, 364 |
| BseGI | GGATG | 5 cut(s) | 9, 100, 211, 444, 1049 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 124, 174, 328, 435, 667, 708, 928, 1330 |
| BseMII | CTCAG | 4 cut(s) | 15, 386, 755, 935 |
| BseNI | ACTGG | 3 cut(s) | 107, 643, 1273 |
| BseRI | GAGGAG | 3 cut(s) | 41, 350, 1289 |
| BseXI | GCAGC | 4 cut(s) | 58, 67, 95, 1075 |
| BseYI | CCCAGC | 3 cut(s) | 683, 707, 1279 |
| BshFI | GGCC | 5 cut(s) | 117, 321, 362, 416, 688 |
| BshNI | GGYRCC | 4 cut(s) | 127, 340, 425, 815 |
| BshTI | ACCGGT | 1 cut(s) | 553 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1323 |
| BsiHKCI | CYCGRG | 1 cut(s) | 724 |
| BsiSI | CCGG | 9 cut(s) | 147, 256, 329, 526, 554, 566, 607, 914, 1067 |
| BslFI | GGGAC | 5 cut(s) | 258, 623, 742, 1049, 1297 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 124, 174, 328, 435, 667, 708, 928, 1330 |
| BsmAI | GTCTC | 2 cut(s) | 14, 765 |
| BsmFI | GGGAC | 5 cut(s) | 258, 623, 742, 1049, 1297 |
| BsmI | GAATGC | 1 cut(s) | 1177 |
| BsnI | GGCC | 5 cut(s) | 117, 321, 362, 416, 688 |
| BsoBI | CYCGRG | 1 cut(s) | 724 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1323 |
| Bsp19I | CCATGG | 3 cut(s) | 417, 702, 927 |
| BspACI | CCGC | 1 cut(s) | 968 |
| BspANI | GGCC | 5 cut(s) | 117, 321, 362, 416, 688 |
| BspCNI | CTCAG | 4 cut(s) | 16, 387, 756, 936 |
| BspHI | TCATGA | 1 cut(s) | 628 |
| BspLI | GGNNCC | 9 cut(s) | 129, 274, 342, 427, 524, 817, 912, 951, 1065 |
| BspMAI | CTGCAG | 3 cut(s) | 76, 85, 697 |
| BspPI | GGATC | 9 cut(s) | 266, 462, 517, 530, 905, 913, 918, 994, 1110 |
| BspT107I | GGYRCC | 4 cut(s) | 127, 340, 425, 815 |
| BsrFI | RCCGGY | 1 cut(s) | 553 |
| BsrI | ACTGG | 3 cut(s) | 107, 643, 1273 |
| BssAI | RCCGGY | 1 cut(s) | 553 |
| BssNI | GRCGYC | 2 cut(s) | 128, 517 |
| BssSI | CACGAG | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 5 cut(s) | 417, 702, 927, 1004, 1108 |
| Bst2BI | CACGAG | 1 cut(s) | 56 |
| Bst2UI | CCWGG | 2 cut(s) | 277, 364 |
| Bst4CI | ACNGT | 3 cut(s) | 614, 855, 865 |
| Bst6I | CTCTTC | 1 cut(s) | 464 |
| BstACI | GRCGYC | 2 cut(s) | 128, 517 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 80 |
| BstBAI | YACGTR | 1 cut(s) | 1202 |
| BstC8I | GCNNGC | 1 cut(s) | 414 |
| BstDEI | CTNAG | 6 cut(s) | 24, 323, 395, 764, 900, 944 |
| BstDSI | CCRYGG | 4 cut(s) | 417, 702, 819, 927 |
| BstF5I | GGATG | 5 cut(s) | 9, 100, 211, 444, 1049 |
| BstH2I | RGCGCY | 3 cut(s) | 131, 220, 413 |
| BstHHI | GCGC | 4 cut(s) | 130, 219, 252, 412 |
| BstMAI | GTCTC | 2 cut(s) | 14, 765 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 77, 80, 134, 368 |
| BstNI | CCWGG | 2 cut(s) | 277, 364 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 863 |
| BstSCI | CCNGG | 6 cut(s) | 145, 275, 362, 525, 606, 1065 |
| BstSFI | CTRYAG | 4 cut(s) | 38, 72, 81, 693 |
| BstSNI | TACGTA | 1 cut(s) | 1202 |
| BstV1I | GCAGC | 4 cut(s) | 58, 67, 95, 1075 |
| BstX2I | RGATCY | 3 cut(s) | 258, 522, 910 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1060 |
| BstYI | RGATCY | 3 cut(s) | 258, 522, 910 |
| Bsu36I | CCTNAGG | 1 cut(s) | 900 |
| BsuI | GTATCC | 1 cut(s) | 1252 |
| BsuRI | GGCC | 5 cut(s) | 117, 321, 362, 416, 688 |
| BtgI | CCRYGG | 4 cut(s) | 417, 702, 819, 927 |
| BtrI | CACGTC | 1 cut(s) | 1354 |
| BtsCI | GGATG | 5 cut(s) | 9, 100, 211, 444, 1049 |
| BtsIMutI | CAGTG | 2 cut(s) | 636, 1266 |
| Cac8I | GCNNGC | 1 cut(s) | 414 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CciI | TCATGA | 1 cut(s) | 628 |
| CfoI | GCGC | 4 cut(s) | 130, 219, 252, 412 |
| Cfr10I | RCCGGY | 1 cut(s) | 553 |
| Cfr13I | GGNCC | 4 cut(s) | 115, 272, 686, 1063 |
| CseI | GACGC | 1 cut(s) | 506 |
| Csp6I | GTAC | 3 cut(s) | 106, 159, 1120 |
| CspAI | ACCGGT | 1 cut(s) | 553 |
| CviQI | GTAC | 3 cut(s) | 106, 159, 1120 |
| DdeI | CTNAG | 6 cut(s) | 24, 323, 395, 764, 900, 944 |
| DinI | GGCGCC | 1 cut(s) | 129 |
| EaeI | YGGCCR | 1 cut(s) | 414 |
| Eam1104I | CTCTTC | 1 cut(s) | 464 |
| EarI | CTCTTC | 1 cut(s) | 464 |
| Ecl136II | GAGCTC | 1 cut(s) | 1321 |
| Eco105I | TACGTA | 1 cut(s) | 1202 |
| Eco130I | CCWWGG | 5 cut(s) | 417, 702, 927, 1004, 1108 |
| Eco147I | AGGCCT | 1 cut(s) | 362 |
| Eco24I | GRGCYC | 1 cut(s) | 1323 |
| Eco47I | GGWCC | 2 cut(s) | 272, 1063 |
| Eco47III | AGCGCT | 1 cut(s) | 218 |
| Eco53kI | GAGCTC | 1 cut(s) | 1321 |
| Eco81I | CCTNAGG | 1 cut(s) | 900 |
| Eco88I | CYCGRG | 1 cut(s) | 724 |
| EcoICRI | GAGCTC | 1 cut(s) | 1321 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| EcoRII | CCWGG | 2 cut(s) | 275, 362 |
| EcoT14I | CCWWGG | 5 cut(s) | 417, 702, 927, 1004, 1108 |
| EcoT38I | GRGCYC | 1 cut(s) | 1323 |
| EgeI | GGCGCC | 1 cut(s) | 129 |
| EheI | GGCGCC | 1 cut(s) | 129 |
| ErhI | CCWWGG | 5 cut(s) | 417, 702, 927, 1004, 1108 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1106, 1138 |
| FaqI | GGGAC | 5 cut(s) | 258, 623, 742, 1049, 1297 |
| FblI | GTMKAC | 1 cut(s) | 857 |
| Fnu4HI | GCNGC | 4 cut(s) | 72, 81, 84, 1089 |
| FokI | GGATG | 4 cut(s) | 107, 218, 451, 1036 |
| FriOI | GRGCYC | 1 cut(s) | 1323 |
| Fsp4HI | GCNGC | 4 cut(s) | 72, 81, 84, 1089 |
| FspBI | CTAG | 4 cut(s) | 891, 1005, 1365, 1371 |
| FspI | TGCGCA | 1 cut(s) | 251 |
| GlaI | GCGC | 4 cut(s) | 129, 218, 251, 411 |
| GluI | GCNGC | 4 cut(s) | 72, 81, 84, 1089 |
| GsaI | CCCAGC | 3 cut(s) | 687, 711, 1283 |
| GsuI | CTGGAG | 1 cut(s) | 806 |
| HaeII | RGCGCY | 3 cut(s) | 131, 220, 413 |
| HaeIII | GGCC | 5 cut(s) | 117, 321, 362, 416, 688 |
| HapII | CCGG | 9 cut(s) | 147, 256, 329, 526, 554, 566, 607, 914, 1067 |
| HgaI | GACGC | 1 cut(s) | 506 |
| HhaI | GCGC | 4 cut(s) | 130, 219, 252, 412 |
| Hin1I | GRCGYC | 2 cut(s) | 128, 517 |
| Hin6I | GCGC | 4 cut(s) | 128, 217, 250, 410 |
| HinP1I | GCGC | 4 cut(s) | 128, 217, 250, 410 |
| HincII | GTYRAC | 3 cut(s) | 573, 720, 858 |
| HindII | GTYRAC | 3 cut(s) | 573, 720, 858 |
| HinfI | GANTC | 3 cut(s) | 47, 986, 1238 |
| HpaI | GTTAAC | 1 cut(s) | 573 |
| HpaII | CCGG | 9 cut(s) | 147, 256, 329, 526, 554, 566, 607, 914, 1067 |
| HphI | GGTGA | 5 cut(s) | 543, 571, 928, 1350, 1361 |
| Hpy166II | GTNNAC | 3 cut(s) | 573, 720, 858 |
| Hpy188I | TCNGA | 7 cut(s) | 185, 288, 396, 522, 662, 765, 985 |
| Hpy8I | GTNNAC | 3 cut(s) | 573, 720, 858 |
| Hpy99I | CGWCG | 2 cut(s) | 522, 859 |
| HpyCH4III | ACNGT | 3 cut(s) | 614, 855, 865 |
| HpyCH4IV | ACGT | 3 cut(s) | 62, 1201, 1353 |
| HpyCH4V | TGCA | 9 cut(s) | 74, 83, 209, 695, 851, 1057, 1091, 1175, 1291 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 77, 80, 134, 368 |
| HpyF3I | CTNAG | 6 cut(s) | 24, 323, 395, 764, 900, 944 |
| HpySE526I | ACGT | 3 cut(s) | 62, 1201, 1353 |
| Hsp92I | GRCGYC | 2 cut(s) | 128, 517 |
| HspAI | GCGC | 4 cut(s) | 128, 217, 250, 410 |
| KasI | GGCGCC | 1 cut(s) | 127 |
| KspAI | GTTAAC | 1 cut(s) | 573 |
| LmnI | GCTCC | 5 cut(s) | 214, 970, 1276, 1318, 1326 |
| Lsp1109I | GCAGC | 4 cut(s) | 58, 67, 95, 1075 |
| LweI | GCATC | 3 cut(s) | 196, 501, 622 |
| MaeI | CTAG | 4 cut(s) | 891, 1005, 1365, 1371 |
| MaeII | ACGT | 3 cut(s) | 62, 1201, 1353 |
| MaeIII | GTNAC | 7 cut(s) | 58, 644, 991, 1015, 1022, 1349, 1356 |
| MfeI | CAATTG | 1 cut(s) | 1058 |
| MflI | RGATCY | 3 cut(s) | 258, 522, 910 |
| MhlI | GDGCHC | 1 cut(s) | 1323 |
| MlsI | TGGCCA | 1 cut(s) | 416 |
| MluCI | AATT | 5 cut(s) | 230, 1058, 1224, 1231, 1377 |
| MluNI | TGGCCA | 1 cut(s) | 416 |
| Mly113I | GGCGCC | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 995 |
| MmeI | TCCRAC | 4 cut(s) | 336, 500, 787, 1236 |
| Mox20I | TGGCCA | 1 cut(s) | 416 |
| MscI | TGGCCA | 1 cut(s) | 416 |
| MseI | TTAA | 7 cut(s) | 572, 594, 656, 1124, 1167, 1376, 1381 |
| MslI | CAYNNNNRTG | 1 cut(s) | 497 |
| Msp20I | TGGCCA | 1 cut(s) | 416 |
| MspI | CCGG | 9 cut(s) | 147, 256, 329, 526, 554, 566, 607, 914, 1067 |
| MspR9I | CCNGG | 6 cut(s) | 147, 277, 364, 527, 608, 1067 |
| MunI | CAATTG | 1 cut(s) | 1058 |
| Mva1269I | GAATGC | 1 cut(s) | 1177 |
| MvaI | CCWGG | 2 cut(s) | 277, 364 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 77, 80, 134, 368 |
| NarI | GGCGCC | 1 cut(s) | 128 |
| NciI | CCSGG | 4 cut(s) | 147, 527, 608, 1067 |
| NcoI | CCATGG | 3 cut(s) | 417, 702, 927 |
| NlaIV | GGNNCC | 9 cut(s) | 129, 274, 342, 427, 524, 817, 912, 951, 1065 |
| NmuCI | GTSAC | 5 cut(s) | 58, 644, 1015, 1349, 1356 |
| NsbI | TGCGCA | 1 cut(s) | 251 |
| PagI | TCATGA | 1 cut(s) | 628 |
| PceI | AGGCCT | 1 cut(s) | 362 |
| PctI | GAATGC | 1 cut(s) | 1177 |
| PfeI | GAWTC | 2 cut(s) | 47, 1238 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 174, 928 |
| PfoI | TCCNGGA | 1 cut(s) | 606 |
| PinAI | ACCGGT | 1 cut(s) | 553 |
| PkrI | GCNGC | 4 cut(s) | 73, 82, 85, 1090 |
| PleI | GAGTC | 1 cut(s) | 994 |
| PluTI | GGCGCC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 994 |
| Ppu21I | YACGTR | 1 cut(s) | 1202 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| PshAI | GACNNNNGTC | 1 cut(s) | 863 |
| Psp124BI | GAGCTC | 1 cut(s) | 1323 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| Psp6I | CCWGG | 2 cut(s) | 275, 362 |
| PspFI | CCCAGC | 3 cut(s) | 683, 707, 1279 |
| PspGI | CCWGG | 2 cut(s) | 275, 362 |
| PspN4I | GGNNCC | 9 cut(s) | 129, 274, 342, 427, 524, 817, 912, 951, 1065 |
| PspPI | GGNCC | 4 cut(s) | 115, 272, 686, 1063 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1015, 1047 |
| PstI | CTGCAG | 3 cut(s) | 76, 85, 697 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| PsuI | RGATCY | 3 cut(s) | 258, 522, 910 |
| RsaI | GTAC | 3 cut(s) | 107, 160, 1121 |
| RsaNI | GTAC | 3 cut(s) | 106, 159, 1120 |
| RseI | CAYNNNNRTG | 1 cut(s) | 497 |
| SacI | GAGCTC | 1 cut(s) | 1323 |
| SalI | GTCGAC | 1 cut(s) | 856 |
| SaqAI | TTAA | 7 cut(s) | 572, 594, 656, 1124, 1167, 1376, 1381 |
| SatI | GCNGC | 4 cut(s) | 72, 81, 84, 1089 |
| Sau96I | GGNCC | 4 cut(s) | 115, 272, 686, 1063 |
| ScaI | AGTACT | 1 cut(s) | 1121 |
| SchI | GAGTC | 1 cut(s) | 995 |
| ScrFI | CCNGG | 6 cut(s) | 147, 277, 364, 527, 608, 1067 |
| SduI | GDGCHC | 1 cut(s) | 1323 |
| SfaNI | GCATC | 3 cut(s) | 196, 501, 622 |
| SfcI | CTRYAG | 4 cut(s) | 38, 72, 81, 693 |
| SfoI | GGCGCC | 1 cut(s) | 129 |
| SgrAI | CRCCGGYG | 1 cut(s) | 553 |
| SinI | GGWCC | 2 cut(s) | 272, 1063 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 497 |
| SmlI | CTYRAG | 1 cut(s) | 1243 |
| SmoI | CTYRAG | 1 cut(s) | 1243 |
| SnaBI | TACGTA | 1 cut(s) | 1202 |
| Sse9I | AATT | 5 cut(s) | 230, 1058, 1224, 1231, 1377 |
| SseBI | AGGCCT | 1 cut(s) | 362 |
| SsiI | CCGC | 1 cut(s) | 968 |
| SspDI | GGCGCC | 1 cut(s) | 127 |
| SspMI | CTAG | 4 cut(s) | 891, 1005, 1365, 1371 |
| SstI | GAGCTC | 1 cut(s) | 1323 |
| StuI | AGGCCT | 1 cut(s) | 362 |
| StyD4I | CCNGG | 6 cut(s) | 145, 275, 362, 525, 606, 1065 |
| StyI | CCWWGG | 5 cut(s) | 417, 702, 927, 1004, 1108 |
| TaaI | ACNGT | 3 cut(s) | 614, 855, 865 |
| TaiI | ACGT | 3 cut(s) | 65, 1204, 1356 |
| TaqI | TCGA | 6 cut(s) | 50, 448, 585, 857, 867, 1139 |
| TasI | AATT | 5 cut(s) | 230, 1058, 1224, 1231, 1377 |
| TatI | WGTACW | 1 cut(s) | 1119 |
| TfiI | GAWTC | 2 cut(s) | 47, 1238 |
| Tru1I | TTAA | 7 cut(s) | 572, 594, 656, 1124, 1167, 1376, 1381 |
| Tru9I | TTAA | 7 cut(s) | 572, 594, 656, 1124, 1167, 1376, 1381 |
| TscAI | CASTG | 2 cut(s) | 643, 1273 |
| TseFI | GTSAC | 5 cut(s) | 58, 644, 1015, 1349, 1356 |
| TseI | GCWGC | 4 cut(s) | 71, 80, 83, 1088 |
| Tsp45I | GTSAC | 5 cut(s) | 58, 644, 1015, 1349, 1356 |
| TspDTI | ATGAA | 6 cut(s) | 255, 568, 617, 862, 1038, 1194 |
| TspRI | CASTG | 2 cut(s) | 643, 1273 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 174, 928 |
| VpaK11BI | GGWCC | 2 cut(s) | 272, 1063 |
| XapI | RAATTY | 2 cut(s) | 1224, 1231 |
| XbaI | TCTAGA | 1 cut(s) | 890 |
| XmaJI | CCTAGG | 1 cut(s) | 1004 |
| XmiI | GTMKAC | 1 cut(s) | 857 |
| XspI | CTAG | 4 cut(s) | 891, 1005, 1365, 1371 |
| ZrmI | AGTACT | 1 cut(s) | 1121 |