Protein ROOT HAIR DEFECTIVE 3 homolog
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 944 |
| AbsI | CCTCGAGG | 1 cut(s) | 177 |
| AccBSI | CCGCTC | 1 cut(s) | 145 |
| AccI | GTMKAC | 1 cut(s) | 215 |
| AclWI | GGATC | 1 cut(s) | 289 |
| AcsI | RAATTY | 3 cut(s) | 25, 370, 410 |
| AfaI | GTAC | 1 cut(s) | 486 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 94, 182, 469, 927 |
| AgsI | TTSAA | 4 cut(s) | 166, 254, 722, 853 |
| AjnI | CCWGG | 1 cut(s) | 926 |
| Alw21I | GWGCWC | 1 cut(s) | 135 |
| AlwI | GGATC | 1 cut(s) | 289 |
| Ama87I | CYCGRG | 1 cut(s) | 177 |
| AoxI | GGCC | 2 cut(s) | 5, 867 |
| ApaI | GGGCCC | 2 cut(s) | 9, 871 |
| ApeKI | GCWGC | 1 cut(s) | 269 |
| ApoI | RAATTY | 3 cut(s) | 25, 370, 410 |
| AspLEI | GCGC | 2 cut(s) | 191, 771 |
| AspS9I | GGNCC | 4 cut(s) | 5, 6, 867, 868 |
| AsuC2I | CCSGG | 1 cut(s) | 536 |
| AsuHPI | GGTGA | 2 cut(s) | 376, 532 |
| AsuNHI | GCTAGC | 1 cut(s) | 649 |
| AvaI | CYCGRG | 1 cut(s) | 177 |
| BaeGI | GKGCMC | 2 cut(s) | 9, 871 |
| BanII | GRGCYC | 3 cut(s) | 9, 135, 871 |
| BbsI | GAAGAC | 1 cut(s) | 942 |
| Bbv12I | GWGCWC | 1 cut(s) | 135 |
| BbvI | GCAGC | 1 cut(s) | 281 |
| BccI | CCATC | 3 cut(s) | 97, 579, 809 |
| BciT130I | CCWGG | 1 cut(s) | 928 |
| BclI | TGATCA | 1 cut(s) | 223 |
| BcnI | CCSGG | 1 cut(s) | 536 |
| BfaI | CTAG | 6 cut(s) | 650, 713, 783, 810, 932, 942 |
| BfmI | CTRYAG | 1 cut(s) | 741 |
| BfoI | RGCGCY | 1 cut(s) | 772 |
| BisI | GCNGC | 5 cut(s) | 184, 187, 270, 402, 798 |
| BlsI | GCNGC | 5 cut(s) | 185, 188, 271, 403, 799 |
| Bme1390I | CCNGG | 2 cut(s) | 536, 928 |
| BmeT110I | CYCGRG | 1 cut(s) | 177 |
| BmgT120I | GGNCC | 4 cut(s) | 5, 6, 867, 868 |
| BmiI | GGNNCC | 4 cut(s) | 6, 7, 430, 869 |
| BmrFI | CCNGG | 2 cut(s) | 536, 928 |
| BmrI | ACTGGG | 1 cut(s) | 553 |
| BmsI | GCATC | 3 cut(s) | 388, 496, 846 |
| BmtI | GCTAGC | 1 cut(s) | 653 |
| BmuI | ACTGGG | 1 cut(s) | 553 |
| BpiI | GAAGAC | 1 cut(s) | 942 |
| Bpu10I | CCTNAGC | 1 cut(s) | 639 |
| BpuEI | CTTGAG | 1 cut(s) | 650 |
| BpuMI | CCSGG | 1 cut(s) | 536 |
| BsaJI | CCNNGG | 1 cut(s) | 902 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 94, 182, 469, 927 |
| Bse1I | ACTGG | 2 cut(s) | 366, 559 |
| Bse3DI | GCAATG | 1 cut(s) | 279 |
| BseBI | CCWGG | 1 cut(s) | 928 |
| BseDI | CCNNGG | 1 cut(s) | 902 |
| BseGI | GGATG | 4 cut(s) | 310, 403, 511, 801 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 94, 182, 469, 927 |
| BseMI | GCAATG | 1 cut(s) | 279 |
| BseMII | CTCAG | 2 cut(s) | 375, 653 |
| BseNI | ACTGG | 2 cut(s) | 366, 559 |
| BseRI | GAGGAG | 1 cut(s) | 675 |
| BseSI | GKGCMC | 2 cut(s) | 9, 871 |
| BseXI | GCAGC | 1 cut(s) | 281 |
| BshFI | GGCC | 2 cut(s) | 7, 869 |
| BsiHKAI | GWGCWC | 1 cut(s) | 135 |
| BsiHKCI | CYCGRG | 1 cut(s) | 177 |
| BsiSI | CCGG | 2 cut(s) | 95, 536 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 94, 182, 469, 927 |
| BsmI | GAATGC | 1 cut(s) | 799 |
| BsnI | GGCC | 2 cut(s) | 7, 869 |
| BsoBI | CYCGRG | 1 cut(s) | 177 |
| Bsp120I | GGGCCC | 2 cut(s) | 5, 867 |
| Bsp1286I | GDGCHC | 3 cut(s) | 9, 135, 871 |
| Bsp143I | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| BspANI | GGCC | 2 cut(s) | 7, 869 |
| BspCNI | CTCAG | 2 cut(s) | 376, 652 |
| BspHI | TCATGA | 1 cut(s) | 820 |
| BspLI | GGNNCC | 4 cut(s) | 6, 7, 430, 869 |
| BspOI | GCTAGC | 1 cut(s) | 653 |
| BspPI | GGATC | 1 cut(s) | 289 |
| BspQI | GCTCTTC | 1 cut(s) | 639 |
| BsrBI | CCGCTC | 1 cut(s) | 145 |
| BsrDI | GCAATG | 1 cut(s) | 279 |
| BsrI | ACTGG | 2 cut(s) | 366, 559 |
| BssECI | CCNNGG | 1 cut(s) | 902 |
| BssMI | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| Bst2UI | CCWGG | 1 cut(s) | 928 |
| Bst4CI | ACNGT | 2 cut(s) | 703, 737 |
| Bst6I | CTCTTC | 3 cut(s) | 615, 639, 681 |
| BstC8I | GCNNGC | 2 cut(s) | 243, 651 |
| BstDEI | CTNAG | 2 cut(s) | 384, 639 |
| BstF5I | GGATG | 4 cut(s) | 310, 403, 511, 801 |
| BstH2I | RGCGCY | 1 cut(s) | 772 |
| BstHHI | GCGC | 2 cut(s) | 191, 771 |
| BstKTI | GATC | 5 cut(s) | 226, 284, 339, 445, 916 |
| BstMBI | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 275, 713 |
| BstNI | CCWGG | 1 cut(s) | 928 |
| BstSCI | CCNGG | 2 cut(s) | 534, 926 |
| BstSFI | CTRYAG | 1 cut(s) | 741 |
| BstSLI | GKGCMC | 2 cut(s) | 9, 871 |
| BstV1I | GCAGC | 1 cut(s) | 281 |
| BstV2I | GAAGAC | 1 cut(s) | 942 |
| BsuRI | GGCC | 2 cut(s) | 7, 869 |
| BtgZI | GCGATG | 1 cut(s) | 75 |
| BtsCI | GGATG | 4 cut(s) | 310, 403, 511, 801 |
| BtsI | GCAGTG | 1 cut(s) | 921 |
| BtsIMutI | CAGTG | 3 cut(s) | 191, 456, 921 |
| Cac8I | GCNNGC | 2 cut(s) | 243, 651 |
| CciI | TCATGA | 1 cut(s) | 820 |
| CfoI | GCGC | 2 cut(s) | 191, 771 |
| Cfr13I | GGNCC | 4 cut(s) | 5, 6, 867, 868 |
| Csp6I | GTAC | 1 cut(s) | 485 |
| CviAII | CATG | 3 cut(s) | 352, 466, 821 |
| CviQI | GTAC | 1 cut(s) | 485 |
| DdeI | CTNAG | 2 cut(s) | 384, 639 |
| DpnI | GATC | 5 cut(s) | 225, 283, 338, 444, 915 |
| DpnII | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 944 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 944 |
| Eam1104I | CTCTTC | 3 cut(s) | 615, 639, 681 |
| EarI | CTCTTC | 3 cut(s) | 615, 639, 681 |
| EciI | GGCGGA | 2 cut(s) | 8, 419 |
| Ecl136II | GAGCTC | 1 cut(s) | 133 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 135, 871 |
| Eco53kI | GAGCTC | 1 cut(s) | 133 |
| Eco88I | CYCGRG | 1 cut(s) | 177 |
| EcoICRI | GAGCTC | 1 cut(s) | 133 |
| EcoO109I | RGGNCCY | 1 cut(s) | 5 |
| EcoRII | CCWGG | 1 cut(s) | 926 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 135, 871 |
| FaeI | CATG | 3 cut(s) | 355, 469, 824 |
| FaiI | YATR | 9 cut(s) | 15, 353, 393, 438, 467, 761, 822, 863, 865 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 612, 644 |
| FatI | CATG | 3 cut(s) | 351, 465, 820 |
| FauNDI | CATATG | 1 cut(s) | 863 |
| FbaI | TGATCA | 1 cut(s) | 223 |
| FblI | GTMKAC | 1 cut(s) | 215 |
| Fnu4HI | GCNGC | 5 cut(s) | 184, 187, 270, 402, 798 |
| FokI | GGATG | 4 cut(s) | 317, 410, 518, 788 |
| FriOI | GRGCYC | 3 cut(s) | 9, 135, 871 |
| Fsp4HI | GCNGC | 5 cut(s) | 184, 187, 270, 402, 798 |
| FspBI | CTAG | 6 cut(s) | 650, 713, 783, 810, 932, 942 |
| GlaI | GCGC | 2 cut(s) | 190, 770 |
| GluI | GCNGC | 5 cut(s) | 184, 187, 270, 402, 798 |
| HaeII | RGCGCY | 1 cut(s) | 772 |
| HaeIII | GGCC | 2 cut(s) | 7, 869 |
| HapII | CCGG | 2 cut(s) | 95, 536 |
| HhaI | GCGC | 2 cut(s) | 191, 771 |
| Hin1II | CATG | 3 cut(s) | 355, 469, 824 |
| Hin6I | GCGC | 2 cut(s) | 189, 769 |
| HinP1I | GCGC | 2 cut(s) | 189, 769 |
| HincII | GTYRAC | 1 cut(s) | 216 |
| HindII | GTYRAC | 1 cut(s) | 216 |
| HindIII | AAGCTT | 3 cut(s) | 320, 676, 844 |
| HinfI | GANTC | 4 cut(s) | 98, 422, 541, 817 |
| HpaII | CCGG | 2 cut(s) | 95, 536 |
| HphI | GGTGA | 2 cut(s) | 376, 532 |
| Hpy166II | GTNNAC | 2 cut(s) | 216, 523 |
| Hpy188I | TCNGA | 5 cut(s) | 38, 128, 149, 416, 906 |
| Hpy188III | TCNNGA | 8 cut(s) | 136, 340, 426, 475, 545, 629, 641, 821 |
| Hpy8I | GTNNAC | 2 cut(s) | 216, 523 |
| Hpy99I | CGWCG | 2 cut(s) | 217, 220 |
| HpyAV | CCTTC | 4 cut(s) | 144, 337, 472, 511 |
| HpyCH4III | ACNGT | 2 cut(s) | 703, 737 |
| HpyCH4V | TGCA | 3 cut(s) | 449, 509, 707 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 275, 713 |
| HpyF3I | CTNAG | 2 cut(s) | 384, 639 |
| Hsp92II | CATG | 3 cut(s) | 355, 469, 824 |
| HspAI | GCGC | 2 cut(s) | 189, 769 |
| Ksp22I | TGATCA | 1 cut(s) | 223 |
| Kzo9I | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| LguI | GCTCTTC | 1 cut(s) | 639 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 281 |
| LweI | GCATC | 3 cut(s) | 388, 496, 846 |
| MaeI | CTAG | 6 cut(s) | 650, 713, 783, 810, 932, 942 |
| MaeIII | GTNAC | 2 cut(s) | 198, 379 |
| MalI | GATC | 5 cut(s) | 225, 283, 338, 444, 915 |
| MbiI | CCGCTC | 1 cut(s) | 145 |
| MboI | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MhlI | GDGCHC | 3 cut(s) | 9, 135, 871 |
| MluCI | AATT | 7 cut(s) | 25, 104, 249, 370, 410, 510, 600 |
| MlyI | GAGTC | 1 cut(s) | 826 |
| MmeI | TCCRAC | 4 cut(s) | 61, 601, 672, 756 |
| MseI | TTAA | 2 cut(s) | 324, 530 |
| MspI | CCGG | 2 cut(s) | 95, 536 |
| MspR9I | CCNGG | 2 cut(s) | 536, 928 |
| MunI | CAATTG | 1 cut(s) | 510 |
| Mva1269I | GAATGC | 1 cut(s) | 799 |
| MvaI | CCWGG | 1 cut(s) | 928 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 275, 713 |
| NciI | CCSGG | 1 cut(s) | 536 |
| NdeI | CATATG | 1 cut(s) | 863 |
| NdeII | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| NheI | GCTAGC | 1 cut(s) | 649 |
| NlaIII | CATG | 3 cut(s) | 355, 469, 824 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 7, 430, 869 |
| NmuCI | GTSAC | 2 cut(s) | 198, 379 |
| PaeR7I | CTCGAG | 1 cut(s) | 177 |
| PagI | TCATGA | 1 cut(s) | 820 |
| PciSI | GCTCTTC | 1 cut(s) | 639 |
| PctI | GAATGC | 1 cut(s) | 799 |
| PfeI | GAWTC | 3 cut(s) | 98, 422, 541 |
| PkrI | GCNGC | 5 cut(s) | 185, 188, 271, 403, 799 |
| PleI | GAGTC | 1 cut(s) | 825 |
| PpsI | GAGTC | 1 cut(s) | 825 |
| Psp124BI | GAGCTC | 1 cut(s) | 135 |
| Psp6I | CCWGG | 1 cut(s) | 926 |
| PspGI | CCWGG | 1 cut(s) | 926 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 7, 430, 869 |
| PspOMI | GGGCCC | 2 cut(s) | 5, 867 |
| PspPI | GGNCC | 4 cut(s) | 5, 6, 867, 868 |
| PspXI | VCTCGAGB | 1 cut(s) | 177 |
| RsaI | GTAC | 1 cut(s) | 486 |
| RsaNI | GTAC | 1 cut(s) | 485 |
| SacI | GAGCTC | 1 cut(s) | 135 |
| SalI | GTCGAC | 1 cut(s) | 214 |
| SapI | GCTCTTC | 1 cut(s) | 639 |
| SaqAI | TTAA | 2 cut(s) | 324, 530 |
| SatI | GCNGC | 5 cut(s) | 184, 187, 270, 402, 798 |
| Sau3AI | GATC | 5 cut(s) | 223, 281, 336, 442, 913 |
| Sau96I | GGNCC | 4 cut(s) | 5, 6, 867, 868 |
| SchI | GAGTC | 1 cut(s) | 826 |
| ScrFI | CCNGG | 2 cut(s) | 536, 928 |
| SduI | GDGCHC | 3 cut(s) | 9, 135, 871 |
| SfaNI | GCATC | 3 cut(s) | 388, 496, 846 |
| SfcI | CTRYAG | 1 cut(s) | 741 |
| Sfr274I | CTCGAG | 1 cut(s) | 177 |
| SgrDI | CGTCGACG | 1 cut(s) | 214 |
| SlaI | CTCGAG | 1 cut(s) | 177 |
| SmlI | CTYRAG | 2 cut(s) | 177, 629 |
| SmoI | CTYRAG | 2 cut(s) | 177, 629 |
| Sse9I | AATT | 7 cut(s) | 25, 104, 249, 370, 410, 510, 600 |
| SspMI | CTAG | 6 cut(s) | 650, 713, 783, 810, 932, 942 |
| SstI | GAGCTC | 1 cut(s) | 135 |
| StyD4I | CCNGG | 2 cut(s) | 534, 926 |
| TaaI | ACNGT | 2 cut(s) | 703, 737 |
| TaqI | TCGA | 4 cut(s) | 137, 178, 215, 284 |
| TasI | AATT | 7 cut(s) | 25, 104, 249, 370, 410, 510, 600 |
| TauI | GCSGC | 4 cut(s) | 186, 189, 404, 800 |
| TfiI | GAWTC | 3 cut(s) | 98, 422, 541 |
| Tru1I | TTAA | 2 cut(s) | 324, 530 |
| Tru9I | TTAA | 2 cut(s) | 324, 530 |
| TscAI | CASTG | 3 cut(s) | 198, 463, 928 |
| TseFI | GTSAC | 2 cut(s) | 198, 379 |
| TseI | GCWGC | 1 cut(s) | 269 |
| Tsp45I | GTSAC | 2 cut(s) | 198, 379 |
| TspDTI | ATGAA | 3 cut(s) | 368, 383, 837 |
| TspRI | CASTG | 3 cut(s) | 198, 463, 928 |
| XapI | RAATTY | 3 cut(s) | 25, 370, 410 |
| XhoI | CTCGAG | 1 cut(s) | 177 |
| XmiI | GTMKAC | 1 cut(s) | 215 |
| XspI | CTAG | 6 cut(s) | 650, 713, 783, 810, 932, 942 |