Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 103, 193 |
| AclWI | GGATC | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 89 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 187 |
| AluBI | AGCT | 2 cut(s) | 23, 98 |
| AluI | AGCT | 2 cut(s) | 23, 98 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AlwI | GGATC | 1 cut(s) | 203 |
| Ama87I | CYCGRG | 1 cut(s) | 144 |
| ApeKI | GCWGC | 1 cut(s) | 23 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 116 |
| AvaI | CYCGRG | 1 cut(s) | 144 |
| BbsI | GAAGAC | 1 cut(s) | 109 |
| BbvI | GCAGC | 1 cut(s) | 10 |
| BccI | CCATC | 1 cut(s) | 118 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 209 |
| BisI | GCNGC | 2 cut(s) | 24, 104 |
| BlsI | GCNGC | 2 cut(s) | 25, 105 |
| BmeT110I | CYCGRG | 1 cut(s) | 144 |
| BpiI | GAAGAC | 1 cut(s) | 109 |
| Bpu10I | CCTNAGC | 1 cut(s) | 54 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseGI | GGATG | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseXI | GCAGC | 1 cut(s) | 10 |
| BsiHKCI | CYCGRG | 1 cut(s) | 144 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsoBI | CYCGRG | 1 cut(s) | 144 |
| Bsp143I | GATC | 2 cut(s) | 73, 195 |
| BspACI | CCGC | 2 cut(s) | 103, 193 |
| BspHI | TCATGA | 1 cut(s) | 120 |
| BspPI | GGATC | 1 cut(s) | 203 |
| BssMI | GATC | 2 cut(s) | 73, 195 |
| BstDEI | CTNAG | 1 cut(s) | 54 |
| BstF5I | GGATG | 1 cut(s) | 180 |
| BstKTI | GATC | 2 cut(s) | 76, 198 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 2 cut(s) | 73, 195 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 32 |
| BstSFI | CTRYAG | 1 cut(s) | 209 |
| BstV1I | GCAGC | 1 cut(s) | 10 |
| BstV2I | GAAGAC | 1 cut(s) | 109 |
| BtsCI | GGATG | 1 cut(s) | 180 |
| CciI | TCATGA | 1 cut(s) | 120 |
| CviAII | CATG | 3 cut(s) | 89, 121, 189 |
| CviJI | RGCY | 3 cut(s) | 23, 35, 98 |
| CviKI_1 | RGCY | 3 cut(s) | 23, 35, 98 |
| DdeI | CTNAG | 1 cut(s) | 54 |
| DpnI | GATC | 2 cut(s) | 75, 197 |
| DpnII | GATC | 2 cut(s) | 73, 195 |
| EciI | GGCGGA | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 1 cut(s) | 144 |
| EcoT22I | ATGCAT | 1 cut(s) | 190 |
| FaeI | CATG | 3 cut(s) | 92, 124, 192 |
| FaiI | YATR | 4 cut(s) | 20, 90, 122, 190 |
| FatI | CATG | 3 cut(s) | 88, 120, 188 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 104 |
| FokI | GGATG | 1 cut(s) | 187 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 104 |
| GluI | GCNGC | 2 cut(s) | 24, 104 |
| Hin1II | CATG | 3 cut(s) | 92, 124, 192 |
| HindIII | AAGCTT | 1 cut(s) | 96 |
| Hpy188I | TCNGA | 1 cut(s) | 80 |
| Hpy188III | TCNNGA | 1 cut(s) | 121 |
| HpyAV | CCTTC | 2 cut(s) | 106, 146 |
| HpyCH4IV | ACGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 1 cut(s) | 188 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 32 |
| HpyF3I | CTNAG | 1 cut(s) | 54 |
| HpySE526I | ACGT | 1 cut(s) | 29 |
| Hsp92II | CATG | 3 cut(s) | 92, 124, 192 |
| Kzo9I | GATC | 2 cut(s) | 73, 195 |
| LpnPI | CCDG | 3 cut(s) | 53, 145, 155 |
| Lsp1109I | GCAGC | 1 cut(s) | 10 |
| MaeII | ACGT | 1 cut(s) | 29 |
| MalI | GATC | 2 cut(s) | 75, 197 |
| MboI | GATC | 2 cut(s) | 73, 195 |
| MboII | GAAGA | 1 cut(s) | 109 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 1 cut(s) | 46 |
| Mph1103I | ATGCAT | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 1 cut(s) | 116 |
| MseI | TTAA | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 32 |
| NdeII | GATC | 2 cut(s) | 73, 195 |
| NlaIII | CATG | 3 cut(s) | 92, 124, 192 |
| NsiI | ATGCAT | 1 cut(s) | 190 |
| PagI | TCATGA | 1 cut(s) | 120 |
| PdmI | GAANNNNTTC | 1 cut(s) | 116 |
| PkrI | GCNGC | 2 cut(s) | 25, 105 |
| SaqAI | TTAA | 1 cut(s) | 12 |
| SatI | GCNGC | 2 cut(s) | 24, 104 |
| Sau3AI | GATC | 2 cut(s) | 73, 195 |
| SetI | ASST | 7 cut(s) | 25, 32, 72, 85, 100, 117, 164 |
| SfcI | CTRYAG | 1 cut(s) | 209 |
| SsiI | CCGC | 2 cut(s) | 103, 193 |
| TaiI | ACGT | 1 cut(s) | 32 |
| TaqI | TCGA | 2 cut(s) | 72, 110 |
| TauI | GCSGC | 1 cut(s) | 106 |
| Tru1I | TTAA | 1 cut(s) | 12 |
| Tru9I | TTAA | 1 cut(s) | 12 |
| TseI | GCWGC | 1 cut(s) | 23 |
| TspDTI | ATGAA | 1 cut(s) | 109 |
| XmnI | GAANNNNTTC | 1 cut(s) | 116 |
| Zsp2I | ATGCAT | 1 cut(s) | 190 |