Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CGI-121 | PF08617 | 3 - 143 | 3.8e-41 | Kinase binding protein CGI-121 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 357 |
| AccBSI | CCGCTC | 2 cut(s) | 233, 329 |
| AciI | CCGC | 2 cut(s) | 231, 329 |
| AclWI | GGATC | 3 cut(s) | 14, 159, 172 |
| AflIII | ACRYGT | 1 cut(s) | 407 |
| AgsI | TTSAA | 3 cut(s) | 190, 216, 241 |
| AjnI | CCWGG | 1 cut(s) | 369 |
| AluBI | AGCT | 4 cut(s) | 8, 80, 145, 316 |
| AluI | AGCT | 4 cut(s) | 8, 80, 145, 316 |
| Alw26I | GTCTC | 1 cut(s) | 105 |
| AlwI | GGATC | 3 cut(s) | 14, 159, 172 |
| Ama87I | CYCGRG | 1 cut(s) | 108 |
| ApeKI | GCWGC | 4 cut(s) | 8, 77, 80, 419 |
| AspS9I | GGNCC | 1 cut(s) | 331 |
| AvaI | CYCGRG | 1 cut(s) | 108 |
| AvaII | GGWCC | 1 cut(s) | 331 |
| BamHI | GGATCC | 1 cut(s) | 164 |
| BauI | CACGAG | 1 cut(s) | 423 |
| BbvI | GCAGC | 3 cut(s) | 67, 89, 406 |
| BciT130I | CCWGG | 1 cut(s) | 371 |
| BcoDI | GTCTC | 1 cut(s) | 105 |
| BfaI | CTAG | 2 cut(s) | 17, 366 |
| BisI | GCNGC | 5 cut(s) | 9, 78, 81, 231, 420 |
| BlsI | GCNGC | 5 cut(s) | 10, 79, 82, 232, 421 |
| Bme1390I | CCNGG | 1 cut(s) | 371 |
| Bme18I | GGWCC | 1 cut(s) | 331 |
| BmeT110I | CYCGRG | 1 cut(s) | 108 |
| BmgT120I | GGNCC | 1 cut(s) | 331 |
| BmiI | GGNNCC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 1 cut(s) | 371 |
| BmsI | GCATC | 3 cut(s) | 210, 388, 418 |
| BseBI | CCWGG | 1 cut(s) | 371 |
| BseMII | CTCAG | 2 cut(s) | 132, 174 |
| BseRI | GAGGAG | 1 cut(s) | 326 |
| BseXI | GCAGC | 3 cut(s) | 67, 89, 406 |
| BseYI | CCCAGC | 1 cut(s) | 316 |
| BsgI | GTGCAG | 1 cut(s) | 66 |
| BsiHKCI | CYCGRG | 1 cut(s) | 108 |
| BslFI | GGGAC | 1 cut(s) | 91 |
| BsmAI | GTCTC | 1 cut(s) | 105 |
| BsmFI | GGGAC | 1 cut(s) | 91 |
| BsmI | GAATGC | 1 cut(s) | 46 |
| BsoBI | CYCGRG | 1 cut(s) | 108 |
| Bsp143I | GATC | 2 cut(s) | 19, 164 |
| BspACI | CCGC | 2 cut(s) | 231, 329 |
| BspCNI | CTCAG | 2 cut(s) | 133, 173 |
| BspLI | GGNNCC | 1 cut(s) | 166 |
| BspPI | GGATC | 3 cut(s) | 14, 159, 172 |
| BsrBI | CCGCTC | 2 cut(s) | 233, 329 |
| BssMI | GATC | 2 cut(s) | 19, 164 |
| BssSI | CACGAG | 1 cut(s) | 423 |
| Bst2BI | CACGAG | 1 cut(s) | 423 |
| Bst2UI | CCWGG | 1 cut(s) | 371 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 75, 228 |
| BstDEI | CTNAG | 2 cut(s) | 141, 160 |
| BstKTI | GATC | 2 cut(s) | 22, 167 |
| BstMAI | GTCTC | 1 cut(s) | 105 |
| BstMBI | GATC | 2 cut(s) | 19, 164 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 335, 428 |
| BstNI | CCWGG | 1 cut(s) | 371 |
| BstNSI | RCATGY | 1 cut(s) | 411 |
| BstSCI | CCNGG | 1 cut(s) | 369 |
| BstV1I | GCAGC | 3 cut(s) | 67, 89, 406 |
| BstX2I | RGATCY | 2 cut(s) | 19, 164 |
| BstYI | RGATCY | 2 cut(s) | 19, 164 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 75, 228 |
| Cfr13I | GGNCC | 1 cut(s) | 331 |
| CseI | GACGC | 1 cut(s) | 33 |
| CviAII | CATG | 1 cut(s) | 408 |
| CviJI | RGCY | 6 cut(s) | 8, 80, 145, 316, 338, 369 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 80, 145, 316, 338, 369 |
| DdeI | CTNAG | 2 cut(s) | 141, 160 |
| DpnI | GATC | 2 cut(s) | 21, 166 |
| DpnII | GATC | 2 cut(s) | 19, 164 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco32I | GATATC | 1 cut(s) | 384 |
| Eco47I | GGWCC | 1 cut(s) | 331 |
| Eco88I | CYCGRG | 1 cut(s) | 108 |
| EcoRII | CCWGG | 1 cut(s) | 369 |
| EcoRV | GATATC | 1 cut(s) | 384 |
| FaeI | CATG | 1 cut(s) | 411 |
| FaiI | YATR | 6 cut(s) | 87, 98, 174, 222, 357, 409 |
| FaqI | GGGAC | 1 cut(s) | 91 |
| FatI | CATG | 1 cut(s) | 407 |
| Fnu4HI | GCNGC | 5 cut(s) | 9, 78, 81, 231, 420 |
| Fsp4HI | GCNGC | 5 cut(s) | 9, 78, 81, 231, 420 |
| FspBI | CTAG | 2 cut(s) | 17, 366 |
| GluI | GCNGC | 5 cut(s) | 9, 78, 81, 231, 420 |
| GsaI | CCCAGC | 1 cut(s) | 320 |
| HgaI | GACGC | 1 cut(s) | 33 |
| Hin1II | CATG | 1 cut(s) | 411 |
| HinfI | GANTC | 2 cut(s) | 113, 182 |
| Hpy166II | GTNNAC | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 5 cut(s) | 39, 142, 208, 253, 414 |
| Hpy188III | TCNNGA | 4 cut(s) | 23, 108, 162, 425 |
| Hpy8I | GTNNAC | 1 cut(s) | 151 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 32, 77, 83 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 335, 428 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 160 |
| Hsp92II | CATG | 1 cut(s) | 411 |
| Kzo9I | GATC | 2 cut(s) | 19, 164 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| LpnPI | CCDG | 7 cut(s) | 36, 69, 147, 302, 353, 356, 383 |
| Lsp1109I | GCAGC | 3 cut(s) | 67, 89, 406 |
| LweI | GCATC | 3 cut(s) | 210, 388, 418 |
| MaeI | CTAG | 2 cut(s) | 17, 366 |
| MaeIII | GTNAC | 1 cut(s) | 45 |
| MalI | GATC | 2 cut(s) | 21, 166 |
| MbiI | CCGCTC | 2 cut(s) | 233, 329 |
| MboI | GATC | 2 cut(s) | 19, 164 |
| MboII | GAAGA | 1 cut(s) | 125 |
| MflI | RGATCY | 2 cut(s) | 19, 164 |
| MlyI | GAGTC | 1 cut(s) | 107 |
| MmeI | TCCRAC | 1 cut(s) | 392 |
| MnlI | CCTC | 3 cut(s) | 304, 314, 397 |
| MspA1I | CMGCKG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 371 |
| Mva1269I | GAATGC | 1 cut(s) | 46 |
| MvaI | CCWGG | 1 cut(s) | 371 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 335, 428 |
| NdeII | GATC | 2 cut(s) | 19, 164 |
| NlaIII | CATG | 1 cut(s) | 411 |
| NlaIV | GGNNCC | 1 cut(s) | 166 |
| NmuCI | GTSAC | 1 cut(s) | 45 |
| NspI | RCATGY | 1 cut(s) | 411 |
| PciI | ACATGT | 1 cut(s) | 407 |
| PctI | GAATGC | 1 cut(s) | 46 |
| PfeI | GAWTC | 1 cut(s) | 182 |
| PkrI | GCNGC | 5 cut(s) | 10, 79, 82, 232, 421 |
| PleI | GAGTC | 1 cut(s) | 107 |
| PpsI | GAGTC | 1 cut(s) | 107 |
| PscI | ACATGT | 1 cut(s) | 407 |
| PsiI | TTATAA | 1 cut(s) | 357 |
| Psp6I | CCWGG | 1 cut(s) | 369 |
| PspFI | CCCAGC | 1 cut(s) | 316 |
| PspGI | CCWGG | 1 cut(s) | 369 |
| PspN4I | GGNNCC | 1 cut(s) | 166 |
| PspPI | GGNCC | 1 cut(s) | 331 |
| PsuI | RGATCY | 2 cut(s) | 19, 164 |
| PvuII | CAGCTG | 1 cut(s) | 80 |
| SatI | GCNGC | 5 cut(s) | 9, 78, 81, 231, 420 |
| Sau3AI | GATC | 2 cut(s) | 19, 164 |
| Sau96I | GGNCC | 1 cut(s) | 331 |
| SchI | GAGTC | 1 cut(s) | 107 |
| ScrFI | CCNGG | 1 cut(s) | 371 |
| SetI | ASST | 4 cut(s) | 10, 82, 147, 318 |
| SfaNI | GCATC | 3 cut(s) | 210, 388, 418 |
| SinI | GGWCC | 1 cut(s) | 331 |
| SsiI | CCGC | 2 cut(s) | 231, 329 |
| SspMI | CTAG | 2 cut(s) | 17, 366 |
| StyD4I | CCNGG | 1 cut(s) | 369 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TauI | GCSGC | 1 cut(s) | 233 |
| TfiI | GAWTC | 1 cut(s) | 182 |
| TscAI | CASTG | 1 cut(s) | 123 |
| TseFI | GTSAC | 1 cut(s) | 45 |
| TseI | GCWGC | 4 cut(s) | 8, 77, 80, 419 |
| Tsp45I | GTSAC | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 125 |
| TspRI | CASTG | 1 cut(s) | 123 |
| VpaK11BI | GGWCC | 1 cut(s) | 331 |
| XceI | RCATGY | 1 cut(s) | 411 |
| XspI | CTAG | 2 cut(s) | 17, 366 |