Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PIR2-like_helical | PF20235 | 137 - 249 | 2.1e-30 | PIR2-like, helical domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1453 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 722 |
| Acc36I | ACCTGC | 2 cut(s) | 1453, 1653 |
| Acc65I | GGTACC | 1 cut(s) | 1588 |
| AccB1I | GGYRCC | 1 cut(s) | 1588 |
| AccBSI | CCGCTC | 1 cut(s) | 1193 |
| AccII | CGCG | 1 cut(s) | 660 |
| AccIII | TCCGGA | 1 cut(s) | 1881 |
| AciI | CCGC | 7 cut(s) | 176, 493, 638, 1191, 1639, 1851, 1943 |
| AclI | AACGTT | 1 cut(s) | 1790 |
| AclWI | GGATC | 2 cut(s) | 98, 575 |
| AcoI | YGGCCR | 1 cut(s) | 568 |
| AcsI | RAATTY | 6 cut(s) | 167, 182, 928, 1540, 1870, 2003 |
| AcuI | CTGAAG | 4 cut(s) | 661, 1320, 1793, 2066 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 5 cut(s) | 34, 629, 1039, 1096, 1590 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 113, 1884 |
| AflII | CTTAAG | 1 cut(s) | 1733 |
| AjnI | CCWGG | 2 cut(s) | 886, 1592 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 617, 649, 1775, 1807 |
| AleI | CACNNNNGTG | 1 cut(s) | 41 |
| Alw21I | GWGCWC | 1 cut(s) | 597 |
| Alw26I | GTCTC | 4 cut(s) | 51, 730, 905, 1363 |
| AlwI | GGATC | 2 cut(s) | 98, 575 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 222, 887, 1460, 1514 |
| Aor13HI | TCCGGA | 1 cut(s) | 1881 |
| AoxI | GGCC | 6 cut(s) | 310, 320, 568, 668, 1401, 1627 |
| ApaI | GGGCCC | 1 cut(s) | 1631 |
| ApoI | RAATTY | 6 cut(s) | 167, 182, 928, 1540, 1870, 2003 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 218, 250 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 348 |
| Asp718I | GGTACC | 1 cut(s) | 1588 |
| AspA2I | CCTAGG | 1 cut(s) | 1631 |
| AspS9I | GGNCC | 9 cut(s) | 118, 311, 513, 1024, 1289, 1402, 1627, 1628, 1642 |
| AsuC2I | CCSGG | 2 cut(s) | 98, 1302 |
| AsuHPI | GGTGA | 4 cut(s) | 188, 761, 789, 2062 |
| AsuNHI | GCTAGC | 1 cut(s) | 1847 |
| AvaII | GGWCC | 5 cut(s) | 118, 513, 1024, 1289, 1642 |
| AvrII | CCTAGG | 1 cut(s) | 1631 |
| BaeGI | GKGCMC | 3 cut(s) | 968, 1016, 1631 |
| BalI | TGGCCA | 1 cut(s) | 570 |
| BanI | GGYRCC | 1 cut(s) | 1588 |
| BanII | GRGCYC | 1 cut(s) | 1631 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1099, 1131 |
| BbsI | GAAGAC | 3 cut(s) | 845, 1107, 1997 |
| Bbv12I | GWGCWC | 1 cut(s) | 597 |
| BbvCI | CCTCAGC | 1 cut(s) | 816 |
| BccI | CCATC | 7 cut(s) | 251, 740, 770, 991, 1228, 1819, 1915 |
| BceAI | ACGGC | 2 cut(s) | 1784, 1862 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 455, 489 |
| BciT130I | CCWGG | 2 cut(s) | 888, 1594 |
| BciVI | GTATCC | 1 cut(s) | 1551 |
| BcnI | CCSGG | 2 cut(s) | 98, 1302 |
| BcoDI | GTCTC | 4 cut(s) | 51, 730, 905, 1363 |
| BfaI | CTAG | 8 cut(s) | 285, 324, 620, 897, 1017, 1632, 1712, 1848 |
| BfmI | CTRYAG | 1 cut(s) | 993 |
| BfrI | CTTAAG | 1 cut(s) | 1733 |
| BfuAI | ACCTGC | 2 cut(s) | 1453, 1653 |
| BfuI | GTATCC | 1 cut(s) | 1551 |
| BglII | AGATCT | 1 cut(s) | 2104 |
| BlnI | CCTAGG | 1 cut(s) | 1631 |
| BmcAI | AGTACT | 1 cut(s) | 1039 |
| Bme1390I | CCNGG | 4 cut(s) | 98, 888, 1302, 1594 |
| Bme18I | GGWCC | 5 cut(s) | 118, 513, 1024, 1289, 1642 |
| BmgT120I | GGNCC | 9 cut(s) | 118, 311, 513, 1024, 1289, 1402, 1627, 1628, 1642 |
| BmiI | GGNNCC | 7 cut(s) | 119, 514, 1265, 1404, 1590, 1629, 1643 |
| BmrFI | CCNGG | 4 cut(s) | 98, 888, 1302, 1594 |
| BmrI | ACTGGG | 1 cut(s) | 1502 |
| BmsI | GCATC | 4 cut(s) | 346, 679, 1220, 1309 |
| BmtI | GCTAGC | 1 cut(s) | 1851 |
| BmuI | ACTGGG | 1 cut(s) | 1502 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1066 |
| BpiI | GAAGAC | 3 cut(s) | 845, 1107, 1997 |
| Bpu10I | CCTNAGC | 1 cut(s) | 816 |
| BpuEI | CTTGAG | 3 cut(s) | 24, 1910, 2093 |
| BpuMI | CCSGG | 2 cut(s) | 98, 1302 |
| BsaAI | YACGTR | 1 cut(s) | 1940 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 8 cut(s) | 18, 274, 1300, 1575, 1592, 1593, 1631, 1842 |
| BsaWI | WCCGGW | 2 cut(s) | 971, 1881 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 16, 46 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 113, 1884 |
| Bse118I | RCCGGY | 2 cut(s) | 318, 1399 |
| Bse1I | ACTGG | 5 cut(s) | 216, 648, 688, 1508, 2052 |
| Bse3DI | GCAATG | 3 cut(s) | 699, 747, 1421 |
| BseAI | TCCGGA | 1 cut(s) | 1881 |
| BseBI | CCWGG | 2 cut(s) | 888, 1594 |
| BseDI | CCNNGG | 8 cut(s) | 18, 274, 1300, 1575, 1592, 1593, 1631, 1842 |
| BseGI | GGATG | 4 cut(s) | 751, 1109, 1324, 1361 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 113, 1884 |
| BseMI | GCAATG | 3 cut(s) | 699, 747, 1421 |
| BseMII | CTCAG | 8 cut(s) | 294, 784, 830, 900, 1124, 1314, 1458, 1812 |
| BseNI | ACTGG | 5 cut(s) | 216, 648, 688, 1508, 2052 |
| BseRI | GAGGAG | 1 cut(s) | 1811 |
| BseSI | GKGCMC | 3 cut(s) | 968, 1016, 1631 |
| BseYI | CCCAGC | 2 cut(s) | 384, 1553 |
| BsgI | GTGCAG | 1 cut(s) | 1890 |
| Bsh1236I | CGCG | 1 cut(s) | 660 |
| BshFI | GGCC | 6 cut(s) | 312, 322, 570, 670, 1403, 1629 |
| BshNI | GGYRCC | 1 cut(s) | 1588 |
| BsiHKAI | GWGCWC | 1 cut(s) | 597 |
| BsiSI | CCGG | 6 cut(s) | 97, 319, 972, 1302, 1400, 1882 |
| BslFI | GGGAC | 3 cut(s) | 131, 1610, 1655 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 113, 1884 |
| BsmAI | GTCTC | 4 cut(s) | 51, 730, 905, 1363 |
| BsmFI | GGGAC | 3 cut(s) | 131, 1610, 1655 |
| BsmI | GAATGC | 4 cut(s) | 865, 1213, 1333, 1906 |
| BsnI | GGCC | 6 cut(s) | 312, 322, 570, 670, 1403, 1629 |
| Bsp120I | GGGCCC | 1 cut(s) | 1627 |
| Bsp1286I | GDGCHC | 4 cut(s) | 597, 968, 1016, 1631 |
| Bsp13I | TCCGGA | 1 cut(s) | 1881 |
| Bsp143I | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| Bsp68I | TCGCGA | 1 cut(s) | 660 |
| BspACI | CCGC | 7 cut(s) | 176, 493, 638, 1191, 1639, 1851, 1943 |
| BspANI | GGCC | 6 cut(s) | 312, 322, 570, 670, 1403, 1629 |
| BspCNI | CTCAG | 8 cut(s) | 295, 783, 829, 901, 1125, 1315, 1459, 1813 |
| BspEI | TCCGGA | 1 cut(s) | 1881 |
| BspFNI | CGCG | 1 cut(s) | 660 |
| BspHI | TCATGA | 1 cut(s) | 1998 |
| BspLI | GGNNCC | 7 cut(s) | 119, 514, 1265, 1404, 1590, 1629, 1643 |
| BspMI | ACCTGC | 2 cut(s) | 1453, 1653 |
| BspOI | GCTAGC | 1 cut(s) | 1851 |
| BspPI | GGATC | 2 cut(s) | 98, 575 |
| BspT107I | GGYRCC | 1 cut(s) | 1588 |
| BspTI | CTTAAG | 1 cut(s) | 1733 |
| BsrBI | CCGCTC | 1 cut(s) | 1193 |
| BsrDI | GCAATG | 3 cut(s) | 699, 747, 1421 |
| BsrFI | RCCGGY | 2 cut(s) | 318, 1399 |
| BsrI | ACTGG | 5 cut(s) | 216, 648, 688, 1508, 2052 |
| BssAI | RCCGGY | 2 cut(s) | 318, 1399 |
| BssECI | CCNNGG | 8 cut(s) | 18, 274, 1300, 1575, 1592, 1593, 1631, 1842 |
| BssMI | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 5 cut(s) | 18, 274, 1575, 1631, 1842 |
| Bst2UI | CCWGG | 2 cut(s) | 888, 1594 |
| Bst4CI | ACNGT | 7 cut(s) | 61, 526, 599, 906, 1094, 1355, 2130 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 1733 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1874 |
| BstBAI | YACGTR | 1 cut(s) | 1940 |
| BstC8I | GCNNGC | 6 cut(s) | 320, 1428, 1698, 1849, 1960, 2097 |
| BstEII | GGTNACC | 1 cut(s) | 749 |
| BstF5I | GGATG | 4 cut(s) | 751, 1109, 1324, 1361 |
| BstFNI | CGCG | 1 cut(s) | 660 |
| BstKTI | GATC | 6 cut(s) | 106, 373, 583, 711, 876, 2107 |
| BstMAI | GTCTC | 4 cut(s) | 51, 730, 905, 1363 |
| BstMBI | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 482, 1328, 1454, 1645, 1654, 1874, 1952 |
| BstNI | CCWGG | 2 cut(s) | 888, 1594 |
| BstNSI | RCATGY | 1 cut(s) | 1057 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1066 |
| BstPI | GGTNACC | 1 cut(s) | 749 |
| BstSCI | CCNGG | 4 cut(s) | 96, 886, 1300, 1592 |
| BstSFI | CTRYAG | 1 cut(s) | 993 |
| BstSLI | GKGCMC | 3 cut(s) | 968, 1016, 1631 |
| BstUI | CGCG | 1 cut(s) | 660 |
| BstV2I | GAAGAC | 3 cut(s) | 845, 1107, 1997 |
| BstX2I | RGATCY | 1 cut(s) | 2104 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 206, 257 |
| BstYI | RGATCY | 1 cut(s) | 2104 |
| BsuI | GTATCC | 1 cut(s) | 1551 |
| BsuRI | GGCC | 6 cut(s) | 312, 322, 570, 670, 1403, 1629 |
| BtgZI | GCGATG | 2 cut(s) | 702, 1247 |
| BtsCI | GGATG | 4 cut(s) | 751, 1109, 1324, 1361 |
| BtsI | GCAGTG | 2 cut(s) | 1481, 1589 |
| BtsIMutI | CAGTG | 9 cut(s) | 223, 595, 681, 778, 888, 1360, 1481, 1515, 1589 |
| BtuMI | TCGCGA | 1 cut(s) | 660 |
| BveI | ACCTGC | 2 cut(s) | 1453, 1653 |
| Cac8I | GCNNGC | 6 cut(s) | 320, 1428, 1698, 1849, 1960, 2097 |
| CaiI | CAGNNNCTG | 4 cut(s) | 222, 887, 1460, 1514 |
| CciI | TCATGA | 1 cut(s) | 1998 |
| Cfr10I | RCCGGY | 2 cut(s) | 318, 1399 |
| Cfr13I | GGNCC | 9 cut(s) | 118, 311, 513, 1024, 1289, 1402, 1627, 1628, 1642 |
| Csp6I | GTAC | 5 cut(s) | 33, 628, 1038, 1095, 1589 |
| CviAII | CATG | 7 cut(s) | 206, 718, 731, 1054, 1366, 1807, 1999 |
| CviQI | GTAC | 5 cut(s) | 33, 628, 1038, 1095, 1589 |
| DpnI | GATC | 6 cut(s) | 105, 372, 582, 710, 875, 2106 |
| DpnII | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| DraI | TTTAAA | 1 cut(s) | 1203 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 722 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 722 |
| EaeI | YGGCCR | 1 cut(s) | 568 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| EciI | GGCGGA | 1 cut(s) | 653 |
| Eco130I | CCWWGG | 5 cut(s) | 18, 274, 1575, 1631, 1842 |
| Eco147I | AGGCCT | 1 cut(s) | 670 |
| Eco24I | GRGCYC | 1 cut(s) | 1631 |
| Eco47I | GGWCC | 5 cut(s) | 118, 513, 1024, 1289, 1642 |
| Eco57I | CTGAAG | 4 cut(s) | 661, 1320, 1793, 2066 |
| Eco91I | GGTNACC | 1 cut(s) | 749 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1628, 1642 |
| EcoO65I | GGTNACC | 1 cut(s) | 749 |
| EcoRII | CCWGG | 2 cut(s) | 886, 1592 |
| EcoT14I | CCWWGG | 5 cut(s) | 18, 274, 1575, 1631, 1842 |
| EcoT22I | ATGCAT | 1 cut(s) | 1213 |
| EcoT38I | GRGCYC | 1 cut(s) | 1631 |
| ErhI | CCWWGG | 5 cut(s) | 18, 274, 1575, 1631, 1842 |
| FaeI | CATG | 7 cut(s) | 209, 721, 734, 1057, 1369, 1810, 2002 |
| FaqI | GGGAC | 3 cut(s) | 131, 1610, 1655 |
| FatI | CATG | 7 cut(s) | 205, 717, 730, 1053, 1365, 1806, 1998 |
| FauI | CCCGC | 1 cut(s) | 1632 |
| FauNDI | CATATG | 1 cut(s) | 1099 |
| FokI | GGATG | 4 cut(s) | 758, 1116, 1331, 1348 |
| FriOI | GRGCYC | 1 cut(s) | 1631 |
| FspBI | CTAG | 8 cut(s) | 285, 324, 620, 897, 1017, 1632, 1712, 1848 |
| GsaI | CCCAGC | 2 cut(s) | 388, 1557 |
| HaeIII | GGCC | 6 cut(s) | 312, 322, 570, 670, 1403, 1629 |
| HapII | CCGG | 6 cut(s) | 97, 319, 972, 1302, 1400, 1882 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 7 cut(s) | 209, 721, 734, 1057, 1369, 1810, 2002 |
| HincII | GTYRAC | 1 cut(s) | 937 |
| HindII | GTYRAC | 1 cut(s) | 937 |
| HindIII | AAGCTT | 1 cut(s) | 1004 |
| HinfI | GANTC | 4 cut(s) | 202, 332, 1184, 1949 |
| HpaI | GTTAAC | 1 cut(s) | 937 |
| HpaII | CCGG | 6 cut(s) | 97, 319, 972, 1302, 1400, 1882 |
| HphI | GGTGA | 4 cut(s) | 188, 761, 789, 2062 |
| Hpy166II | GTNNAC | 4 cut(s) | 797, 902, 937, 1668 |
| Hpy188I | TCNGA | 7 cut(s) | 256, 304, 337, 858, 910, 1183, 1531 |
| Hpy8I | GTNNAC | 4 cut(s) | 797, 902, 937, 1668 |
| HpyAV | CCTTC | 6 cut(s) | 321, 461, 594, 1302, 1383, 1681 |
| HpyCH4III | ACNGT | 7 cut(s) | 61, 526, 599, 906, 1094, 1355, 2130 |
| HpyCH4IV | ACGT | 3 cut(s) | 1314, 1790, 1939 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 482, 1328, 1454, 1645, 1654, 1874, 1952 |
| HpySE526I | ACGT | 3 cut(s) | 1314, 1790, 1939 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 7 cut(s) | 209, 721, 734, 1057, 1369, 1810, 2002 |
| Kpn2I | TCCGGA | 1 cut(s) | 1881 |
| KpnI | GGTACC | 1 cut(s) | 1592 |
| KroI | GCCGGC | 1 cut(s) | 318 |
| KroNI | GCCGGC | 1 cut(s) | 320 |
| KspAI | GTTAAC | 1 cut(s) | 937 |
| Kzo9I | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| LmnI | GCTCC | 1 cut(s) | 592 |
| LweI | GCATC | 4 cut(s) | 346, 679, 1220, 1309 |
| MaeI | CTAG | 8 cut(s) | 285, 324, 620, 897, 1017, 1632, 1712, 1848 |
| MaeII | ACGT | 3 cut(s) | 1314, 1790, 1939 |
| MalI | GATC | 6 cut(s) | 105, 372, 582, 710, 875, 2106 |
| MbiI | CCGCTC | 1 cut(s) | 1193 |
| MboI | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| MflI | RGATCY | 1 cut(s) | 2104 |
| MhlI | GDGCHC | 4 cut(s) | 597, 968, 1016, 1631 |
| MlsI | TGGCCA | 1 cut(s) | 570 |
| MluNI | TGGCCA | 1 cut(s) | 570 |
| MlyI | GAGTC | 2 cut(s) | 1178, 1958 |
| MmeI | TCCRAC | 1 cut(s) | 1773 |
| Mox20I | TGGCCA | 1 cut(s) | 570 |
| Mph1103I | ATGCAT | 1 cut(s) | 1213 |
| MroI | TCCGGA | 1 cut(s) | 1881 |
| MroNI | GCCGGC | 1 cut(s) | 318 |
| MroXI | GAANNNNTTC | 1 cut(s) | 348 |
| MscI | TGGCCA | 1 cut(s) | 570 |
| MslI | CAYNNNNRTG | 4 cut(s) | 41, 255, 735, 1102 |
| Msp20I | TGGCCA | 1 cut(s) | 570 |
| MspA1I | CMGCKG | 5 cut(s) | 176, 1457, 1657, 1955, 2077 |
| MspCI | CTTAAG | 1 cut(s) | 1733 |
| MspI | CCGG | 6 cut(s) | 97, 319, 972, 1302, 1400, 1882 |
| MspR9I | CCNGG | 4 cut(s) | 98, 888, 1302, 1594 |
| Mva1269I | GAATGC | 4 cut(s) | 865, 1213, 1333, 1906 |
| MvaI | CCWGG | 2 cut(s) | 888, 1594 |
| MvnI | CGCG | 1 cut(s) | 660 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 482, 1328, 1454, 1645, 1654, 1874, 1952 |
| NaeI | GCCGGC | 1 cut(s) | 320 |
| NciI | CCSGG | 2 cut(s) | 98, 1302 |
| NdeI | CATATG | 1 cut(s) | 1099 |
| NdeII | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| NgoMIV | GCCGGC | 1 cut(s) | 318 |
| NheI | GCTAGC | 1 cut(s) | 1847 |
| NlaIII | CATG | 7 cut(s) | 209, 721, 734, 1057, 1369, 1810, 2002 |
| NlaIV | GGNNCC | 7 cut(s) | 119, 514, 1265, 1404, 1590, 1629, 1643 |
| NmuCI | GTSAC | 7 cut(s) | 194, 224, 458, 713, 749, 1068, 2050 |
| NruI | TCGCGA | 1 cut(s) | 660 |
| NsiI | ATGCAT | 1 cut(s) | 1213 |
| NspI | RCATGY | 1 cut(s) | 1057 |
| OliI | CACNNNNGTG | 1 cut(s) | 41 |
| PagI | TCATGA | 1 cut(s) | 1998 |
| PaqCI | CACCTGC | 1 cut(s) | 1453 |
| PasI | CCCWGGG | 1 cut(s) | 1593 |
| PceI | AGGCCT | 1 cut(s) | 670 |
| PctI | GAATGC | 4 cut(s) | 865, 1213, 1333, 1906 |
| PdiI | GCCGGC | 1 cut(s) | 320 |
| PdmI | GAANNNNTTC | 1 cut(s) | 348 |
| PfeI | GAWTC | 2 cut(s) | 202, 332 |
| PleI | GAGTC | 2 cut(s) | 1178, 1957 |
| PpsI | GAGTC | 2 cut(s) | 1178, 1957 |
| Ppu21I | YACGTR | 1 cut(s) | 1940 |
| PpuMI | RGGWCCY | 1 cut(s) | 1642 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1066 |
| Psp1406I | AACGTT | 1 cut(s) | 1790 |
| Psp5II | RGGWCCY | 1 cut(s) | 1642 |
| Psp6I | CCWGG | 2 cut(s) | 886, 1592 |
| PspEI | GGTNACC | 1 cut(s) | 749 |
| PspFI | CCCAGC | 2 cut(s) | 384, 1553 |
| PspGI | CCWGG | 2 cut(s) | 886, 1592 |
| PspN4I | GGNNCC | 7 cut(s) | 119, 514, 1265, 1404, 1590, 1629, 1643 |
| PspOMI | GGGCCC | 1 cut(s) | 1627 |
| PspPI | GGNCC | 9 cut(s) | 118, 311, 513, 1024, 1289, 1402, 1627, 1628, 1642 |
| PspPPI | RGGWCCY | 1 cut(s) | 1642 |
| PstNI | CAGNNNCTG | 4 cut(s) | 222, 887, 1460, 1514 |
| PsuI | RGATCY | 1 cut(s) | 2104 |
| PvuII | CAGCTG | 4 cut(s) | 1457, 1657, 1955, 2077 |
| RruI | TCGCGA | 1 cut(s) | 660 |
| RsaI | GTAC | 5 cut(s) | 34, 629, 1039, 1096, 1590 |
| RsaNI | GTAC | 5 cut(s) | 33, 628, 1038, 1095, 1589 |
| RseI | CAYNNNNRTG | 4 cut(s) | 41, 255, 735, 1102 |
| Sau3AI | GATC | 6 cut(s) | 103, 370, 580, 708, 873, 2104 |
| Sau96I | GGNCC | 9 cut(s) | 118, 311, 513, 1024, 1289, 1402, 1627, 1628, 1642 |
| ScaI | AGTACT | 1 cut(s) | 1039 |
| SchI | GAGTC | 2 cut(s) | 1178, 1958 |
| ScrFI | CCNGG | 4 cut(s) | 98, 888, 1302, 1594 |
| SduI | GDGCHC | 4 cut(s) | 597, 968, 1016, 1631 |
| SfaNI | GCATC | 4 cut(s) | 346, 679, 1220, 1309 |
| SfcI | CTRYAG | 1 cut(s) | 993 |
| SinI | GGWCC | 5 cut(s) | 118, 513, 1024, 1289, 1642 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 41, 255, 735, 1102 |
| SmlI | CTYRAG | 4 cut(s) | 39, 1733, 1889, 2108 |
| SmoI | CTYRAG | 4 cut(s) | 39, 1733, 1889, 2108 |
| SseBI | AGGCCT | 1 cut(s) | 670 |
| SsiI | CCGC | 7 cut(s) | 176, 493, 638, 1191, 1639, 1851, 1943 |
| SspMI | CTAG | 8 cut(s) | 285, 324, 620, 897, 1017, 1632, 1712, 1848 |
| StuI | AGGCCT | 1 cut(s) | 670 |
| StyD4I | CCNGG | 4 cut(s) | 96, 886, 1300, 1592 |
| StyI | CCWWGG | 5 cut(s) | 18, 274, 1575, 1631, 1842 |
| TaaI | ACNGT | 7 cut(s) | 61, 526, 599, 906, 1094, 1355, 2130 |
| TaiI | ACGT | 3 cut(s) | 1317, 1793, 1942 |
| TaqI | TCGA | 1 cut(s) | 1060 |
| TatI | WGTACW | 2 cut(s) | 627, 1037 |
| TauI | GCSGC | 1 cut(s) | 1946 |
| TfiI | GAWTC | 2 cut(s) | 202, 332 |
| TscAI | CASTG | 9 cut(s) | 223, 602, 688, 778, 888, 1360, 1488, 1515, 1589 |
| TseFI | GTSAC | 7 cut(s) | 194, 224, 458, 713, 749, 1068, 2050 |
| Tsp45I | GTSAC | 7 cut(s) | 194, 224, 458, 713, 749, 1068, 2050 |
| TspDTI | ATGAA | 6 cut(s) | 288, 734, 1064, 1364, 1823, 2015 |
| TspRI | CASTG | 9 cut(s) | 223, 602, 688, 778, 888, 1360, 1488, 1515, 1589 |
| Vha464I | CTTAAG | 1 cut(s) | 1733 |
| VpaK11BI | GGWCC | 5 cut(s) | 118, 513, 1024, 1289, 1642 |
| XapI | RAATTY | 6 cut(s) | 167, 182, 928, 1540, 1870, 2003 |
| XceI | RCATGY | 1 cut(s) | 1057 |
| XmaJI | CCTAGG | 1 cut(s) | 1631 |
| XmnI | GAANNNNTTC | 1 cut(s) | 348 |
| XspI | CTAG | 8 cut(s) | 285, 324, 620, 897, 1017, 1632, 1712, 1848 |
| ZrmI | AGTACT | 1 cut(s) | 1039 |
| Zsp2I | ATGCAT | 1 cut(s) | 1213 |