No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 13 - 51 | 1.3e-06 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 233, 289, 542 |
| AcoI | YGGCCR | 1 cut(s) | 286 |
| AcuI | CTGAAG | 1 cut(s) | 582 |
| AdeI | CACNNNGTG | 1 cut(s) | 139 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 223, 532 |
| AflIII | ACRYGT | 1 cut(s) | 489 |
| AgsI | TTSAA | 2 cut(s) | 427, 462 |
| AjiI | CACGTC | 1 cut(s) | 139 |
| AluBI | AGCT | 6 cut(s) | 117, 283, 320, 416, 443, 476 |
| AluI | AGCT | 6 cut(s) | 117, 283, 320, 416, 443, 476 |
| Alw21I | GWGCWC | 1 cut(s) | 196 |
| Alw26I | GTCTC | 2 cut(s) | 354, 530 |
| AoxI | GGCC | 1 cut(s) | 286 |
| ApeKI | GCWGC | 1 cut(s) | 320 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 377 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 1 cut(s) | 354 |
| AsuC2I | CCSGG | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 4 cut(s) | 109, 215, 238, 422 |
| AvaII | GGWCC | 1 cut(s) | 354 |
| BbsI | GAAGAC | 2 cut(s) | 248, 281 |
| Bbv12I | GWGCWC | 1 cut(s) | 196 |
| BbvI | GCAGC | 1 cut(s) | 307 |
| BccI | CCATC | 1 cut(s) | 461 |
| BceAI | ACGGC | 1 cut(s) | 246 |
| BcnI | CCSGG | 1 cut(s) | 249 |
| BcoDI | GTCTC | 2 cut(s) | 354, 530 |
| BfaI | CTAG | 1 cut(s) | 417 |
| BfmI | CTRYAG | 2 cut(s) | 321, 444 |
| BfoI | RGCGCY | 1 cut(s) | 109 |
| BisI | GCNGC | 2 cut(s) | 289, 321 |
| BlpI | GCTNAGC | 1 cut(s) | 472 |
| BlsI | GCNGC | 2 cut(s) | 290, 322 |
| Bme1390I | CCNGG | 1 cut(s) | 249 |
| Bme18I | GGWCC | 1 cut(s) | 354 |
| BmgBI | CACGTC | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 1 cut(s) | 354 |
| BmiI | GGNNCC | 1 cut(s) | 546 |
| BmrFI | CCNGG | 1 cut(s) | 249 |
| BmrI | ACTGGG | 1 cut(s) | 428 |
| BmuI | ACTGGG | 1 cut(s) | 428 |
| BoxI | GACNNNNGTC | 1 cut(s) | 402 |
| BpiI | GAAGAC | 2 cut(s) | 248, 281 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 472 |
| BpuMI | CCSGG | 1 cut(s) | 249 |
| BsaWI | WCCGGW | 1 cut(s) | 196 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 223, 532 |
| Bse118I | RCCGGY | 1 cut(s) | 184 |
| Bse1I | ACTGG | 1 cut(s) | 434 |
| BseGI | GGATG | 2 cut(s) | 337, 490 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 223, 532 |
| BseNI | ACTGG | 1 cut(s) | 434 |
| BseXI | GCAGC | 1 cut(s) | 307 |
| BseYI | CCCAGC | 1 cut(s) | 476 |
| Bsh1285I | CGRYCG | 1 cut(s) | 189 |
| BshFI | GGCC | 1 cut(s) | 288 |
| BsiEI | CGRYCG | 1 cut(s) | 189 |
| BsiHKAI | GWGCWC | 1 cut(s) | 196 |
| BsiSI | CCGG | 3 cut(s) | 185, 197, 248 |
| BslFI | GGGAC | 1 cut(s) | 227 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 223, 532 |
| BsmAI | GTCTC | 2 cut(s) | 354, 530 |
| BsmFI | GGGAC | 1 cut(s) | 227 |
| BsmI | GAATGC | 1 cut(s) | 433 |
| BsnI | GGCC | 1 cut(s) | 288 |
| Bsp1286I | GDGCHC | 1 cut(s) | 196 |
| Bsp143I | GATC | 3 cut(s) | 151, 261, 609 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 472 |
| BspACI | CCGC | 3 cut(s) | 233, 289, 542 |
| BspANI | GGCC | 1 cut(s) | 288 |
| BspLI | GGNNCC | 1 cut(s) | 546 |
| BspMAI | CTGCAG | 1 cut(s) | 325 |
| BsrFI | RCCGGY | 1 cut(s) | 184 |
| BsrI | ACTGG | 1 cut(s) | 434 |
| BssAI | RCCGGY | 1 cut(s) | 184 |
| BssMI | GATC | 3 cut(s) | 151, 261, 609 |
| Bst4CI | ACNGT | 2 cut(s) | 64, 404 |
| Bst6I | CTCTTC | 2 cut(s) | 61, 580 |
| BstC8I | GCNNGC | 1 cut(s) | 393 |
| BstDEI | CTNAG | 3 cut(s) | 279, 303, 472 |
| BstF5I | GGATG | 2 cut(s) | 337, 490 |
| BstH2I | RGCGCY | 1 cut(s) | 109 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 3 cut(s) | 154, 264, 612 |
| BstMAI | GTCTC | 2 cut(s) | 354, 530 |
| BstMBI | GATC | 3 cut(s) | 151, 261, 609 |
| BstMCI | CGRYCG | 1 cut(s) | 189 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 21, 114, 449, 635 |
| BstNSI | RCATGY | 1 cut(s) | 493 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 402 |
| BstSCI | CCNGG | 1 cut(s) | 247 |
| BstSFI | CTRYAG | 2 cut(s) | 321, 444 |
| BstV1I | GCAGC | 1 cut(s) | 307 |
| BstV2I | GAAGAC | 2 cut(s) | 248, 281 |
| BsuRI | GGCC | 1 cut(s) | 288 |
| BtrI | CACGTC | 1 cut(s) | 139 |
| BtsCI | GGATG | 2 cut(s) | 337, 490 |
| BtsI | GCAGTG | 1 cut(s) | 345 |
| BtsIMutI | CAGTG | 3 cut(s) | 345, 441, 606 |
| Cac8I | GCNNGC | 1 cut(s) | 393 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr10I | RCCGGY | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 354 |
| CviAII | CATG | 1 cut(s) | 490 |
| CviJI | RGCY | 9 cut(s) | 117, 212, 283, 288, 320, 416, 443, 471, 476 |
| CviKI_1 | RGCY | 9 cut(s) | 117, 212, 283, 288, 320, 416, 443, 471, 476 |
| DdeI | CTNAG | 3 cut(s) | 279, 303, 472 |
| DpnI | GATC | 3 cut(s) | 153, 263, 611 |
| DpnII | GATC | 3 cut(s) | 151, 261, 609 |
| DraIII | CACNNNGTG | 1 cut(s) | 139 |
| EaeI | YGGCCR | 1 cut(s) | 286 |
| Eam1104I | CTCTTC | 2 cut(s) | 61, 580 |
| EarI | CTCTTC | 2 cut(s) | 61, 580 |
| Eco47I | GGWCC | 1 cut(s) | 354 |
| Eco57I | CTGAAG | 1 cut(s) | 582 |
| FaeI | CATG | 1 cut(s) | 493 |
| FaiI | YATR | 5 cut(s) | 90, 491, 500, 529, 531 |
| FaqI | GGGAC | 1 cut(s) | 227 |
| FatI | CATG | 1 cut(s) | 489 |
| FauNDI | CATATG | 1 cut(s) | 529 |
| Fnu4HI | GCNGC | 2 cut(s) | 289, 321 |
| FokI | GGATG | 2 cut(s) | 344, 497 |
| Fsp4HI | GCNGC | 2 cut(s) | 289, 321 |
| FspBI | CTAG | 1 cut(s) | 417 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 2 cut(s) | 289, 321 |
| GsaI | CCCAGC | 1 cut(s) | 480 |
| HaeII | RGCGCY | 1 cut(s) | 109 |
| HaeIII | GGCC | 1 cut(s) | 288 |
| HapII | CCGG | 3 cut(s) | 185, 197, 248 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1II | CATG | 1 cut(s) | 493 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HindIII | AAGCTT | 1 cut(s) | 281 |
| HinfI | GANTC | 3 cut(s) | 176, 378, 568 |
| HpaII | CCGG | 3 cut(s) | 185, 197, 248 |
| HphI | GGTGA | 4 cut(s) | 109, 215, 238, 422 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 2 cut(s) | 261, 372 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 382 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| Hpy99I | CGWCG | 3 cut(s) | 140, 404, 617 |
| HpyAV | CCTTC | 3 cut(s) | 322, 358, 475 |
| HpyCH4III | ACNGT | 2 cut(s) | 64, 404 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 323 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 21, 114, 449, 635 |
| HpyF3I | CTNAG | 3 cut(s) | 279, 303, 472 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| Hsp92II | CATG | 1 cut(s) | 493 |
| HspAI | GCGC | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 151, 261, 609 |
| LmnI | GCTCC | 3 cut(s) | 199, 440, 449 |
| LpnPI | CCDG | 9 cut(s) | 198, 210, 230, 261, 377, 395, 432, 447, 462 |
| Lsp1109I | GCAGC | 1 cut(s) | 307 |
| MaeI | CTAG | 1 cut(s) | 417 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MalI | GATC | 3 cut(s) | 153, 263, 611 |
| MboI | GATC | 3 cut(s) | 151, 261, 609 |
| MboII | GAAGA | 4 cut(s) | 48, 248, 286, 567 |
| MhlI | GDGCHC | 1 cut(s) | 196 |
| MluCI | AATT | 4 cut(s) | 18, 206, 386, 506 |
| MlyI | GAGTC | 1 cut(s) | 562 |
| MmeI | TCCRAC | 1 cut(s) | 350 |
| MnlI | CCTC | 7 cut(s) | 61, 136, 255, 328, 553, 583, 614 |
| MroXI | GAANNNNTTC | 1 cut(s) | 377 |
| MspI | CCGG | 3 cut(s) | 185, 197, 248 |
| MspR9I | CCNGG | 1 cut(s) | 249 |
| Mva1269I | GAATGC | 1 cut(s) | 433 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 21, 114, 449, 635 |
| NciI | CCSGG | 1 cut(s) | 249 |
| NdeI | CATATG | 1 cut(s) | 529 |
| NdeII | GATC | 3 cut(s) | 151, 261, 609 |
| NlaIII | CATG | 1 cut(s) | 493 |
| NlaIV | GGNNCC | 1 cut(s) | 546 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| NspI | RCATGY | 1 cut(s) | 493 |
| PciI | ACATGT | 1 cut(s) | 489 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 135 |
| PctI | GAATGC | 1 cut(s) | 433 |
| PdmI | GAANNNNTTC | 1 cut(s) | 377 |
| PfeI | GAWTC | 2 cut(s) | 176, 378 |
| PkrI | GCNGC | 2 cut(s) | 290, 322 |
| PleI | GAGTC | 1 cut(s) | 562 |
| PpsI | GAGTC | 1 cut(s) | 562 |
| PscI | ACATGT | 1 cut(s) | 489 |
| PshAI | GACNNNNGTC | 1 cut(s) | 402 |
| PspFI | CCCAGC | 1 cut(s) | 476 |
| PspN4I | GGNNCC | 1 cut(s) | 546 |
| PspPI | GGNCC | 1 cut(s) | 354 |
| PstI | CTGCAG | 1 cut(s) | 325 |
| SatI | GCNGC | 2 cut(s) | 289, 321 |
| Sau3AI | GATC | 3 cut(s) | 151, 261, 609 |
| Sau96I | GGNCC | 1 cut(s) | 354 |
| SchI | GAGTC | 1 cut(s) | 562 |
| ScrFI | CCNGG | 1 cut(s) | 249 |
| SduI | GDGCHC | 1 cut(s) | 196 |
| SfcI | CTRYAG | 2 cut(s) | 321, 444 |
| SinI | GGWCC | 1 cut(s) | 354 |
| Sse9I | AATT | 4 cut(s) | 18, 206, 386, 506 |
| SsiI | CCGC | 3 cut(s) | 233, 289, 542 |
| SspMI | CTAG | 1 cut(s) | 417 |
| StyD4I | CCNGG | 1 cut(s) | 247 |
| TaaI | ACNGT | 2 cut(s) | 64, 404 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TaqI | TCGA | 1 cut(s) | 612 |
| TaqII | GACCGA | 1 cut(s) | 342 |
| TasI | AATT | 4 cut(s) | 18, 206, 386, 506 |
| TauI | GCSGC | 1 cut(s) | 291 |
| TfiI | GAWTC | 2 cut(s) | 176, 378 |
| TscAI | CASTG | 3 cut(s) | 345, 441, 606 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| TseI | GCWGC | 1 cut(s) | 320 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 3 cut(s) | 17, 105, 515 |
| TspRI | CASTG | 3 cut(s) | 345, 441, 606 |
| VpaK11BI | GGWCC | 1 cut(s) | 354 |
| XceI | RCATGY | 1 cut(s) | 493 |
| XmnI | GAANNNNTTC | 1 cut(s) | 377 |
| XspI | CTAG | 1 cut(s) | 417 |