FvH4_6g03011

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000049
Physical Location & Seq
Reverse (-)
1686137 .. 1690915
4779 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g03011.t1

Sequence Viewer

Length: 1482 bp
ATGGCTTCTGCTATTGCATCTTTGTCGTCGGCTTTTCAAGCCGCGTCATCCAATCTGTTGCTCTCGAACTCTTCCCGACTCAAGATCGGAATTGAAAGGGGGGCGGCGACCAAAGATGATCATTCCTACCTAGTAGGTCGATTGTTGGGTCCTAAGGACAGGTTCCCAGGTTTCAAAGGTACCATCTCCACGATTTGGAGAGCGAAGAAGGGGTTGTCCGTCTCCGATGCTGGGGATCGCTATGTGTTCCAATTTGATCGAGTTTCAGTTCGCAATCAGGTCTTTCATGGTGGTCTATGGCACTATAGGAACACAATGCTTGTCCTTGGTGAGTATGACGGGAGAGGAGACCCTGCTGCTGTCCCTCTCAATTTACTTGAGACGTGGGTGGATGTTCAGGGACTGCCACACCTTCTTAGAAACCCTATGGCTTTGAGAATGGTGGGTACAGGTCTTGGCCGTGTCATTCGGTTTGATCCACAAGCTTTGAAGCGGAAGGAGGAGATCCAGCGCATTCGGTTGGAGTTTGATGTTCGTCGCCGCTGTGACCGAATGGTGGAGCTTGAGAGAGCAGCTATCAAGGCTCTTCCGACGGAGGAGTTAGGCAATCTCTCTTTGTTCTCAAACCCGGTTTTTGTTCCTAGGGTTTCTGAGGGTGGACTGAGGTCTGCCCATGCAGTGAAGTCTAAGACAACTTCTTTGCTCTCGGTAGACACAGGTGGCAGCTCTAACTCAGTGGCTTCACTGGTGAAAGGTAGTGGTGGAGGGGTGGAGCCGGTGGTATGTTTATCGGCCCCTATGGTGGTGGAGCGGCATGAAAAGTCGTGCACTATTGGGAGTAAGCAGAAGGCTGTGGACTTGTTGGAGTATACAGGTAAACGCTTTCTAAATTTCCCTGAACCATCTCTGAATATTGCTGAGGCAGGATCTGTGGCTTTGGTTCATCATCAAGGACAGTTGGTTGTATCCCCAAAGAAGAAGAAGAAGTTAGGTTGCCCTTATAGCAGCAAGAACAAACCTAGAACAGAGACCGCTCCTGTGGTCAAGAAATGGAAGAGTCACAAGAAAGTTTCCTCCTCCAAGAAGACTACTGCTAAAGGGCTTGTTTCTGTAGGTTCGGTGGGGATGCTCAAGGAGGCACCAACTCCGGAGCCAGAGATAGAACTGCTGATGATTGAGGCGCAGGCTAAGAAGGGTGAGGAGGATGCGTCTGGCGTCCCTCTCATAGGATCTCCCAAACAGAGGCCCAATCCCTTTCATCGTGTGGCTATAAATACAGAATCCCCAAATCGGAAAAACCCAGAACCCCAGAGGAGGAGGTCACTGAGCTCCAAGATGCTCCAGCACATCAATTACCGCATGAGAGTCACCATCCACGACGGCCGCCAGCTCGTCGGAATGCCTCCTCCTCCCGGTGTGTTTGGACCTCCACGTGGAATGCCGCCGCCGCCGCAGAACCCTAACCAGCAGCAGCAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

494

Amino Acids

53.97

Weight (kDa)

10.15

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 179
AccB1I GGYRCC 2 cut(s) 179, 1138
AccB7I CCANNNNNTGG 1 cut(s) 195
AccBSI CCGCTC 2 cut(s) 811, 1034
AccI GTMKAC 2 cut(s) 711, 869
AccII CGCG 1 cut(s) 44
AccIII TCCGGA 1 cut(s) 1147
AclWI GGATC 5 cut(s) 243, 470, 499, 934, 1237
AcoI YGGCCR 2 cut(s) 457, 1381
AcsI RAATTY 1 cut(s) 889
AcvI CACGTG 1 cut(s) 1433
AcyI GRCGYC 1 cut(s) 1215
AfaI GTAC 2 cut(s) 181, 448
AgsI TTSAA 4 cut(s) 38, 95, 175, 490
AjiI CACGTC 1 cut(s) 384
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 6 cut(s) 485, 562, 575, 726, 1329, 1390
AluI AGCT 6 cut(s) 485, 562, 575, 726, 1329, 1390
Alw21I GWGCWC 2 cut(s) 830, 1331
Alw26I GTCTC 4 cut(s) 226, 342, 374, 1022
Alw44I GTGCAC 1 cut(s) 826
AlwI GGATC 5 cut(s) 243, 470, 499, 934, 1237
AlwNI CAGNNNCTG 2 cut(s) 403, 929
Aor13HI TCCGGA 1 cut(s) 1147
AoxI GGCC 4 cut(s) 457, 792, 1244, 1381
ApaLI GTGCAC 1 cut(s) 826
ApeKI GCWGC 6 cut(s) 356, 572, 723, 1005, 1468, 1471
ApoI RAATTY 1 cut(s) 889
ArsI GACNNNNNNTTYG 2 cut(s) 682, 714
Asp718I GGTACC 1 cut(s) 179
AspA2I CCTAGG 1 cut(s) 641
AspLEI GCGC 2 cut(s) 513, 1183
AspS9I GGNCC 4 cut(s) 149, 793, 1245, 1424
AsuC2I CCSGG 2 cut(s) 629, 1413
AsuHPI GGTGA 4 cut(s) 341, 760, 1208, 1360
AvaII GGWCC 2 cut(s) 149, 1424
AvrII CCTAGG 1 cut(s) 641
AxyI CCTNAGG 1 cut(s) 153
BaeGI GKGCMC 1 cut(s) 830
BanI GGYRCC 2 cut(s) 179, 1138
BanII GRGCYC 1 cut(s) 1331
BbrPI CACGTG 1 cut(s) 1433
BbsI GAAGAC 1 cut(s) 1091
Bbv12I GWGCWC 2 cut(s) 830, 1331
BbvCI CCTCAGC 1 cut(s) 918
BbvI GCAGC 4 cut(s) 343, 584, 735, 1017
BccI CCATC 3 cut(s) 191, 910, 1379
BceAI ACGGC 2 cut(s) 444, 1396
BcgI CGANNNNNNTGC 2 cut(s) 6, 40
BciT130I CCWGG 1 cut(s) 168
BciVI GTATCC 1 cut(s) 976
BclI TGATCA 1 cut(s) 118
BcnI CCSGG 2 cut(s) 629, 1413
BcoDI GTCTC 4 cut(s) 226, 342, 374, 1022
BfaI CTAG 3 cut(s) 131, 642, 1020
BfmI CTRYAG 2 cut(s) 304, 1110
BfuI GTATCC 1 cut(s) 976
BlnI CCTAGG 1 cut(s) 641
Bme1390I CCNGG 3 cut(s) 168, 629, 1413
Bme18I GGWCC 2 cut(s) 149, 1424
BmgBI CACGTC 1 cut(s) 384
BmgT120I GGNCC 4 cut(s) 149, 793, 1245, 1424
BmiI GGNNCC 7 cut(s) 150, 164, 181, 774, 795, 1140, 1152
BmrFI CCNGG 3 cut(s) 168, 629, 1413
BmsI GCATC 5 cut(s) 26, 217, 1116, 1195, 1326
BoxI GACNNNNGTC 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 1091
BpmI CTGGAG 1 cut(s) 1325
Bpu10I CCTNAGC 1 cut(s) 918
BpuEI CTTGAG 4 cut(s) 65, 398, 584, 1115
BpuMI CCSGG 2 cut(s) 629, 1413
BsaAI YACGTR 1 cut(s) 1433
BsaHI GRCGYC 1 cut(s) 1215
BsaI GGTCTC 2 cut(s) 342, 1022
BsaJI CCNNGG 3 cut(s) 166, 325, 641
BsaWI WCCGGW 1 cut(s) 1147
BsaXI ACNNNNNCTCC 2 cut(s) 1193, 1223
Bse118I RCCGGY 1 cut(s) 775
Bse1I ACTGG 1 cut(s) 750
Bse21I CCTNAGG 1 cut(s) 153
BseAI TCCGGA 1 cut(s) 1147
BseBI CCWGG 1 cut(s) 168
BseDI CCNNGG 3 cut(s) 166, 325, 641
BseGI GGATG 5 cut(s) 47, 397, 1131, 1210, 1371
BseMII CTCAG 5 cut(s) 642, 653, 747, 909, 1316
BseNI ACTGG 1 cut(s) 750
BseRI GAGGAG 9 cut(s) 360, 515, 611, 1066, 1214, 1327, 1330, 1395, 1398
BseSI GKGCMC 1 cut(s) 830
BseX3I CGGCCG 1 cut(s) 1381
BseXI GCAGC 4 cut(s) 343, 584, 735, 1017
BseYI CCCAGC 1 cut(s) 230
Bsh1236I CGCG 1 cut(s) 44
Bsh1285I CGRYCG 1 cut(s) 1384
BshFI GGCC 4 cut(s) 459, 794, 1246, 1383
BshNI GGYRCC 2 cut(s) 179, 1138
BsiEI CGRYCG 1 cut(s) 1384
BsiHKAI GWGCWC 2 cut(s) 830, 1331
BsiSI CCGG 4 cut(s) 629, 776, 1148, 1413
BslFI GGGAC 3 cut(s) 347, 414, 1202
BsmAI GTCTC 4 cut(s) 226, 342, 374, 1022
BsmBI CGTCTC 2 cut(s) 226, 374
BsmFI GGGAC 3 cut(s) 347, 414, 1202
BsmI GAATGC 3 cut(s) 513, 1404, 1443
BsnI GGCC 4 cut(s) 459, 794, 1246, 1383
Bso31I GGTCTC 2 cut(s) 342, 1022
Bsp1286I GDGCHC 2 cut(s) 830, 1331
Bsp13I TCCGGA 1 cut(s) 1147
Bsp143I GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
BspANI GGCC 4 cut(s) 459, 794, 1246, 1383
BspCNI CTCAG 5 cut(s) 643, 654, 746, 910, 1317
BspEI TCCGGA 1 cut(s) 1147
BspFNI CGCG 1 cut(s) 44
BspLI GGNNCC 7 cut(s) 150, 164, 181, 774, 795, 1140, 1152
BspPI GGATC 5 cut(s) 243, 470, 499, 934, 1237
BspQI GCTCTTC 1 cut(s) 591
BspT107I GGYRCC 2 cut(s) 179, 1138
BspTNI GGTCTC 2 cut(s) 342, 1022
BsrBI CCGCTC 2 cut(s) 811, 1034
BsrFI RCCGGY 1 cut(s) 775
BsrI ACTGG 1 cut(s) 750
BssAI RCCGGY 1 cut(s) 775
BssECI CCNNGG 3 cut(s) 166, 325, 641
BssMI GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
BssNAI GTATAC 1 cut(s) 870
BssNI GRCGYC 1 cut(s) 1215
BssT1I CCWWGG 2 cut(s) 325, 641
Bst1107I GTATAC 1 cut(s) 870
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 2 cut(s) 957, 1479
Bst6I CTCTTC 3 cut(s) 76, 591, 1049
BstACI GRCGYC 1 cut(s) 1215
BstBAI YACGTR 1 cut(s) 1433
BstC8I GCNNGC 2 cut(s) 1185, 1388
BstDEI CTNAG 9 cut(s) 153, 416, 651, 662, 687, 733, 918, 1188, 1325
BstENI CCTNNNNNAGG 1 cut(s) 1224
BstF5I GGATG 5 cut(s) 47, 397, 1131, 1210, 1371
BstFNI CGCG 1 cut(s) 44
BstHHI GCGC 2 cut(s) 513, 1183
BstKTI GATC 8 cut(s) 87, 121, 238, 259, 478, 507, 929, 1232
BstMAI GTCTC 4 cut(s) 226, 342, 374, 1022
BstMBI GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
BstMCI CGRYCG 1 cut(s) 1384
BstMWI GCNNNNNNNGC 5 cut(s) 38, 581, 1002, 1447, 1450
BstNI CCWGG 1 cut(s) 168
BstPAI GACNNNNGTC 1 cut(s) 664
BstSCI CCNGG 3 cut(s) 166, 627, 1411
BstSFI CTRYAG 2 cut(s) 304, 1110
BstSLI GKGCMC 1 cut(s) 830
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 4 cut(s) 343, 584, 735, 1017
BstV2I GAAGAC 1 cut(s) 1091
BstX2I RGATCY 3 cut(s) 504, 926, 1229
BstYI RGATCY 3 cut(s) 504, 926, 1229
BstZ17I GTATAC 1 cut(s) 870
BstZI CGGCCG 1 cut(s) 1381
Bsu36I CCTNAGG 1 cut(s) 153
BsuI GTATCC 1 cut(s) 976
BsuRI GGCC 4 cut(s) 459, 794, 1246, 1383
BtrI CACGTC 1 cut(s) 384
BtsCI GGATG 5 cut(s) 47, 397, 1131, 1210, 1371
BtsI GCAGTG 1 cut(s) 684
BtsIMutI CAGTG 4 cut(s) 684, 741, 743, 1322
Cac8I GCNNGC 2 cut(s) 1185, 1388
CaiI CAGNNNCTG 2 cut(s) 403, 929
CfoI GCGC 2 cut(s) 513, 1183
Cfr10I RCCGGY 1 cut(s) 775
Cfr13I GGNCC 4 cut(s) 149, 793, 1245, 1424
CseI GACGC 3 cut(s) 33, 1197, 1204
Csp6I GTAC 2 cut(s) 180, 447
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviAII CATG 4 cut(s) 287, 674, 815, 1360
CviQI GTAC 2 cut(s) 180, 447
DdeI CTNAG 9 cut(s) 153, 416, 651, 662, 687, 733, 918, 1188, 1325
DpnI GATC 8 cut(s) 86, 120, 237, 258, 477, 506, 928, 1231
DpnII GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
EaeI YGGCCR 2 cut(s) 457, 1381
EagI CGGCCG 1 cut(s) 1381
Eam1104I CTCTTC 3 cut(s) 76, 591, 1049
EarI CTCTTC 3 cut(s) 76, 591, 1049
Ecl136II GAGCTC 1 cut(s) 1329
EclXI CGGCCG 1 cut(s) 1381
Eco130I CCWWGG 2 cut(s) 325, 641
Eco24I GRGCYC 1 cut(s) 1331
Eco31I GGTCTC 2 cut(s) 342, 1022
Eco47I GGWCC 2 cut(s) 149, 1424
Eco52I CGGCCG 1 cut(s) 1381
Eco53kI GAGCTC 1 cut(s) 1329
Eco72I CACGTG 1 cut(s) 1433
Eco81I CCTNAGG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 1329
EcoNI CCTNNNNNAGG 1 cut(s) 1224
EcoO109I RGGNCCY 1 cut(s) 149
EcoRII CCWGG 1 cut(s) 166
EcoT14I CCWWGG 2 cut(s) 325, 641
EcoT38I GRGCYC 1 cut(s) 1331
ErhI CCWWGG 2 cut(s) 325, 641
Esp3I CGTCTC 2 cut(s) 226, 374
FaeI CATG 4 cut(s) 290, 677, 818, 1363
FaqI GGGAC 3 cut(s) 347, 414, 1202
FatI CATG 4 cut(s) 286, 673, 814, 1359
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 2 cut(s) 711, 869
FokI GGATG 5 cut(s) 34, 404, 1138, 1217, 1358
FriOI GRGCYC 1 cut(s) 1331
FspBI CTAG 3 cut(s) 131, 642, 1020
GlaI GCGC 2 cut(s) 512, 1182
GsaI CCCAGC 1 cut(s) 234
GsuI CTGGAG 1 cut(s) 1325
HaeIII GGCC 4 cut(s) 459, 794, 1246, 1383
HapII CCGG 4 cut(s) 629, 776, 1148, 1413
HgaI GACGC 3 cut(s) 33, 1197, 1204
HhaI GCGC 2 cut(s) 513, 1183
Hin1I GRCGYC 1 cut(s) 1215
Hin1II CATG 4 cut(s) 290, 677, 818, 1363
Hin6I GCGC 2 cut(s) 511, 1181
HinP1I GCGC 2 cut(s) 511, 1181
HindIII AAGCTT 1 cut(s) 483
HinfI GANTC 4 cut(s) 78, 1057, 1280, 1365
HpaII CCGG 4 cut(s) 629, 776, 1148, 1413
HphI GGTGA 4 cut(s) 341, 760, 1208, 1360
Hpy166II GTNNAC 6 cut(s) 659, 712, 828, 856, 870, 878
Hpy188I TCNGA 7 cut(s) 89, 226, 591, 652, 909, 1293, 1397
Hpy188III TCNNGA 5 cut(s) 64, 75, 82, 1045, 1148
Hpy8I GTNNAC 6 cut(s) 659, 712, 828, 856, 870, 878
Hpy99I CGWCG 5 cut(s) 31, 540, 595, 1382, 1397
HpyAV CCTTC 5 cut(s) 202, 422, 490, 841, 1186
HpyCH4III ACNGT 2 cut(s) 957, 1479
HpyCH4IV ACGT 2 cut(s) 383, 1432
HpyCH4V TGCA 3 cut(s) 17, 677, 828
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 581, 1002, 1447, 1450
HpyF3I CTNAG 9 cut(s) 153, 416, 651, 662, 687, 733, 918, 1188, 1325
HpySE526I ACGT 2 cut(s) 383, 1432
Hsp92I GRCGYC 1 cut(s) 1215
Hsp92II CATG 4 cut(s) 290, 677, 818, 1363
HspAI GCGC 2 cut(s) 511, 1181
Kpn2I TCCGGA 1 cut(s) 1147
KpnI GGTACC 1 cut(s) 183
Ksp22I TGATCA 1 cut(s) 118
Kzo9I GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
LguI GCTCTTC 1 cut(s) 591
LmnI GCTCC 7 cut(s) 559, 772, 808, 1039, 1150, 1334, 1344
Lsp1109I GCAGC 4 cut(s) 343, 584, 735, 1017
LweI GCATC 5 cut(s) 26, 217, 1116, 1195, 1326
MaeI CTAG 3 cut(s) 131, 642, 1020
MaeII ACGT 2 cut(s) 383, 1432
MaeIII GTNAC 4 cut(s) 545, 1058, 1320, 1366
MalI GATC 8 cut(s) 86, 120, 237, 258, 477, 506, 928, 1231
MbiI CCGCTC 2 cut(s) 811, 1034
MboI GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
MboII GAAGA 8 cut(s) 63, 217, 578, 988, 991, 994, 1066, 1096
MflI RGATCY 3 cut(s) 504, 926, 1229
MhlI GDGCHC 2 cut(s) 830, 1331
MluCI AATT 5 cut(s) 90, 251, 370, 889, 1351
MlyI GAGTC 3 cut(s) 72, 1066, 1374
MmeI TCCRAC 4 cut(s) 501, 614, 843, 1375
MroI TCCGGA 1 cut(s) 1147
MspA1I CMGCKG 1 cut(s) 543
MspI CCGG 4 cut(s) 629, 776, 1148, 1413
MspR9I CCNGG 3 cut(s) 168, 629, 1413
Mva1269I GAATGC 3 cut(s) 513, 1404, 1443
MvaI CCWGG 1 cut(s) 168
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 5 cut(s) 38, 581, 1002, 1447, 1450
NciI CCSGG 2 cut(s) 629, 1413
NdeII GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
NlaIII CATG 4 cut(s) 290, 677, 818, 1363
NlaIV GGNNCC 7 cut(s) 150, 164, 181, 774, 795, 1140, 1152
NmuCI GTSAC 4 cut(s) 545, 1058, 1320, 1366
PciSI GCTCTTC 1 cut(s) 591
PctI GAATGC 3 cut(s) 513, 1404, 1443
PfeI GAWTC 1 cut(s) 1280
PflMI CCANNNNNTGG 1 cut(s) 195
PleI GAGTC 3 cut(s) 72, 1065, 1373
PmaCI CACGTG 1 cut(s) 1433
PmlI CACGTG 1 cut(s) 1433
PpsI GAGTC 3 cut(s) 72, 1065, 1373
Ppu21I YACGTR 1 cut(s) 1433
PpuMI RGGWCCY 1 cut(s) 149
PshAI GACNNNNGTC 1 cut(s) 664
Psp124BI GAGCTC 1 cut(s) 1331
Psp5II RGGWCCY 1 cut(s) 149
Psp6I CCWGG 1 cut(s) 166
PspCI CACGTG 1 cut(s) 1433
PspFI CCCAGC 1 cut(s) 230
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 7 cut(s) 150, 164, 181, 774, 795, 1140, 1152
PspPI GGNCC 4 cut(s) 149, 793, 1245, 1424
PspPPI RGGWCCY 1 cut(s) 149
PstNI CAGNNNCTG 2 cut(s) 403, 929
PsuI RGATCY 3 cut(s) 504, 926, 1229
RsaI GTAC 2 cut(s) 181, 448
RsaNI GTAC 2 cut(s) 180, 447
SacI GAGCTC 1 cut(s) 1331
SapI GCTCTTC 1 cut(s) 591
Sau3AI GATC 8 cut(s) 84, 118, 235, 256, 475, 504, 926, 1229
Sau96I GGNCC 4 cut(s) 149, 793, 1245, 1424
SchI GAGTC 3 cut(s) 72, 1066, 1374
ScrFI CCNGG 3 cut(s) 168, 629, 1413
SduI GDGCHC 2 cut(s) 830, 1331
SfaNI GCATC 5 cut(s) 26, 217, 1116, 1195, 1326
SfcI CTRYAG 2 cut(s) 304, 1110
SinI GGWCC 2 cut(s) 149, 1424
SmlI CTYRAG 4 cut(s) 80, 377, 563, 1130
SmoI CTYRAG 4 cut(s) 80, 377, 563, 1130
Sse9I AATT 5 cut(s) 90, 251, 370, 889, 1351
SspI AATATT 1 cut(s) 913
SspMI CTAG 3 cut(s) 131, 642, 1020
SstI GAGCTC 1 cut(s) 1331
StyD4I CCNGG 3 cut(s) 166, 627, 1411
StyI CCWWGG 2 cut(s) 325, 641
TaaI ACNGT 2 cut(s) 957, 1479
TaiI ACGT 2 cut(s) 386, 1435
TaqI TCGA 3 cut(s) 65, 139, 259
TaqII GACCGA 1 cut(s) 564
TasI AATT 5 cut(s) 90, 251, 370, 889, 1351
TauI GCSGC 9 cut(s) 44, 107, 543, 814, 1386, 1444, 1447, 1450, 1453
TfiI GAWTC 1 cut(s) 1280
TscAI CASTG 4 cut(s) 684, 741, 750, 1329
TseFI GTSAC 4 cut(s) 545, 1058, 1320, 1366
TseI GCWGC 6 cut(s) 356, 572, 723, 1005, 1468, 1471
Tsp45I GTSAC 4 cut(s) 545, 1058, 1320, 1366
TspDTI ATGAA 4 cut(s) 275, 831, 932, 1247
TspGWI ACGGA 2 cut(s) 208, 608
TspRI CASTG 4 cut(s) 684, 741, 750, 1329
Van91I CCANNNNNTGG 1 cut(s) 195
VneI GTGCAC 1 cut(s) 826
VpaK11BI GGWCC 2 cut(s) 149, 1424
XagI CCTNNNNNAGG 1 cut(s) 1224
XapI RAATTY 1 cut(s) 889
XmaJI CCTAGG 1 cut(s) 641
XmiI GTMKAC 2 cut(s) 711, 869
XspI CTAG 3 cut(s) 131, 642, 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.