No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DNMT1-RFD | PF12047 | 13 - 134 | 3.6e-09 | Cytosine specific DNA methyltransferase replication foci domain |
| PHD_NSD | PF22908 | 263 - 331 | 4.5e-19 | Histone-lysine N-methyltransferase NSD-like, PHD zinc finger |
| PHDvar_NSD | PF23004 | 333 - 401 | 1.4e-06 | Histone-lysine N-methyltransferase NSD-like, variant PHD zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 153 |
| AccIII | TCCGGA | 1 cut(s) | 355 |
| AciI | CCGC | 3 cut(s) | 153, 1572, 1649 |
| AclWI | GGATC | 5 cut(s) | 272, 816, 829, 1025, 1038 |
| AcsI | RAATTY | 3 cut(s) | 206, 1247, 1272 |
| AcuI | CTGAAG | 1 cut(s) | 158 |
| AfaI | GTAC | 3 cut(s) | 183, 386, 1539 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 168, 537, 1383 |
| AflIII | ACRYGT | 1 cut(s) | 980 |
| AgsI | TTSAA | 3 cut(s) | 101, 521, 1578 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1296 |
| AjnI | CCWGG | 3 cut(s) | 416, 577, 729 |
| AluBI | AGCT | 4 cut(s) | 191, 1154, 1439, 1448 |
| AluI | AGCT | 4 cut(s) | 191, 1154, 1439, 1448 |
| Alw21I | GWGCWC | 2 cut(s) | 246, 273 |
| Alw26I | GTCTC | 2 cut(s) | 112, 917 |
| AlwI | GGATC | 5 cut(s) | 272, 816, 829, 1025, 1038 |
| Aor13HI | TCCGGA | 1 cut(s) | 355 |
| AoxI | GGCC | 4 cut(s) | 278, 414, 419, 527 |
| ApeKI | GCWGC | 3 cut(s) | 999, 1439, 1646 |
| ApoI | RAATTY | 3 cut(s) | 206, 1247, 1272 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1091, 1123 |
| AspLEI | GCGC | 1 cut(s) | 153 |
| AspS9I | GGNCC | 3 cut(s) | 528, 669, 1237 |
| AsuHPI | GGTGA | 3 cut(s) | 244, 707, 1139 |
| AsuII | TTCGAA | 2 cut(s) | 54, 751 |
| AvaII | GGWCC | 2 cut(s) | 669, 1237 |
| AxyI | CCTNAGG | 1 cut(s) | 665 |
| BamHI | GGATCC | 2 cut(s) | 821, 1030 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1152, 1184 |
| BbsI | GAAGAC | 2 cut(s) | 844, 1143 |
| Bbv12I | GWGCWC | 2 cut(s) | 246, 273 |
| BbvCI | CCTCAGC | 1 cut(s) | 846 |
| BbvI | GCAGC | 3 cut(s) | 986, 1426, 1633 |
| BccI | CCATC | 1 cut(s) | 1624 |
| BciT130I | CCWGG | 3 cut(s) | 418, 579, 731 |
| BciVI | GTATCC | 1 cut(s) | 1138 |
| BclI | TGATCA | 2 cut(s) | 345, 550 |
| BcoDI | GTCTC | 2 cut(s) | 112, 917 |
| BfaI | CTAG | 2 cut(s) | 1533, 1667 |
| BfmI | CTRYAG | 1 cut(s) | 936 |
| BfuI | GTATCC | 1 cut(s) | 1138 |
| BisI | GCNGC | 4 cut(s) | 154, 1000, 1440, 1647 |
| BlsI | GCNGC | 4 cut(s) | 155, 1001, 1441, 1648 |
| BmcAI | AGTACT | 2 cut(s) | 386, 1539 |
| Bme1390I | CCNGG | 3 cut(s) | 418, 579, 731 |
| Bme18I | GGWCC | 2 cut(s) | 669, 1237 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1296 |
| BmgT120I | GGNCC | 3 cut(s) | 528, 669, 1237 |
| BmiI | GGNNCC | 3 cut(s) | 823, 1032, 1238 |
| BmrFI | CCNGG | 3 cut(s) | 418, 579, 731 |
| BmsI | GCATC | 5 cut(s) | 14, 650, 733, 802, 1540 |
| BpiI | GAAGAC | 2 cut(s) | 844, 1143 |
| BpmI | CTGGAG | 1 cut(s) | 257 |
| Bpu10I | CCTNAGC | 1 cut(s) | 846 |
| Bpu14I | TTCGAA | 2 cut(s) | 54, 751 |
| BpuEI | CTTGAG | 3 cut(s) | 968, 1451, 1477 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1321 |
| BsaI | GGTCTC | 1 cut(s) | 917 |
| BsaJI | CCNNGG | 5 cut(s) | 281, 729, 825, 1094, 1521 |
| BsaWI | WCCGGW | 2 cut(s) | 355, 926 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 168, 537, 1383 |
| Bse118I | RCCGGY | 1 cut(s) | 229 |
| Bse21I | CCTNAGG | 1 cut(s) | 665 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1321 |
| BseAI | TCCGGA | 1 cut(s) | 355 |
| BseBI | CCWGG | 3 cut(s) | 418, 579, 731 |
| BseDI | CCNNGG | 5 cut(s) | 281, 729, 825, 1094, 1521 |
| BseGI | GGATG | 6 cut(s) | 739, 889, 1070, 1555, 1594, 1616 |
| BseJI | GATNNNNATC | 1 cut(s) | 1321 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 168, 537, 1383 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseMII | CTCAG | 4 cut(s) | 837, 1272, 1392, 1532 |
| BseXI | GCAGC | 3 cut(s) | 986, 1426, 1633 |
| BseYI | CCCAGC | 2 cut(s) | 964, 1448 |
| BsgI | GTGCAG | 1 cut(s) | 844 |
| Bsh1236I | CGCG | 1 cut(s) | 153 |
| BshFI | GGCC | 4 cut(s) | 280, 416, 421, 529 |
| BsiHKAI | GWGCWC | 2 cut(s) | 246, 273 |
| BsiSI | CCGG | 3 cut(s) | 230, 356, 927 |
| BslFI | GGGAC | 4 cut(s) | 1112, 1250, 1315, 1494 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 168, 537, 1383 |
| BsmAI | GTCTC | 2 cut(s) | 112, 917 |
| BsmFI | GGGAC | 4 cut(s) | 1112, 1250, 1315, 1494 |
| BsnI | GGCC | 4 cut(s) | 280, 416, 421, 529 |
| Bso31I | GGTCTC | 1 cut(s) | 917 |
| Bsp119I | TTCGAA | 2 cut(s) | 54, 751 |
| Bsp1286I | GDGCHC | 2 cut(s) | 246, 273 |
| Bsp13I | TCCGGA | 1 cut(s) | 355 |
| Bsp143I | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| BspACI | CCGC | 3 cut(s) | 153, 1572, 1649 |
| BspANI | GGCC | 4 cut(s) | 280, 416, 421, 529 |
| BspCNI | CTCAG | 4 cut(s) | 838, 1273, 1391, 1533 |
| BspEI | TCCGGA | 1 cut(s) | 355 |
| BspFNI | CGCG | 1 cut(s) | 153 |
| BspHI | TCATGA | 1 cut(s) | 919 |
| BspLI | GGNNCC | 3 cut(s) | 823, 1032, 1238 |
| BspMAI | CTGCAG | 1 cut(s) | 940 |
| BspPI | GGATC | 5 cut(s) | 272, 816, 829, 1025, 1038 |
| BspT104I | TTCGAA | 2 cut(s) | 54, 751 |
| BspTNI | GGTCTC | 1 cut(s) | 917 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BsrFI | RCCGGY | 1 cut(s) | 229 |
| BssAI | RCCGGY | 1 cut(s) | 229 |
| BssECI | CCNNGG | 5 cut(s) | 281, 729, 825, 1094, 1521 |
| BssMI | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| BssT1I | CCWWGG | 1 cut(s) | 1521 |
| Bst2UI | CCWGG | 3 cut(s) | 418, 579, 731 |
| Bst4CI | ACNGT | 9 cut(s) | 181, 332, 610, 685, 695, 779, 1082, 1178, 1460 |
| Bst6I | CTCTTC | 3 cut(s) | 281, 516, 1304 |
| BstBI | TTCGAA | 2 cut(s) | 54, 751 |
| BstC8I | GCNNGC | 1 cut(s) | 1091 |
| BstDEI | CTNAG | 6 cut(s) | 335, 665, 846, 1281, 1378, 1541 |
| BstDSI | CCRYGG | 1 cut(s) | 1094 |
| BstF5I | GGATG | 6 cut(s) | 739, 889, 1070, 1555, 1594, 1616 |
| BstFNI | CGCG | 1 cut(s) | 153 |
| BstHHI | GCGC | 1 cut(s) | 153 |
| BstKTI | GATC | 6 cut(s) | 267, 348, 436, 553, 824, 1033 |
| BstMAI | GTCTC | 2 cut(s) | 112, 917 |
| BstMBI | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 197, 250, 277, 1445 |
| BstNI | CCWGG | 3 cut(s) | 418, 579, 731 |
| BstNSI | RCATGY | 2 cut(s) | 984, 1568 |
| BstSCI | CCNGG | 3 cut(s) | 416, 577, 729 |
| BstSFI | CTRYAG | 1 cut(s) | 936 |
| BstUI | CGCG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 3 cut(s) | 986, 1426, 1633 |
| BstV2I | GAAGAC | 2 cut(s) | 844, 1143 |
| BstX2I | RGATCY | 2 cut(s) | 821, 1030 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 102 |
| BstYI | RGATCY | 2 cut(s) | 821, 1030 |
| Bsu36I | CCTNAGG | 1 cut(s) | 665 |
| BsuI | GTATCC | 1 cut(s) | 1138 |
| BsuRI | GGCC | 4 cut(s) | 280, 416, 421, 529 |
| BtgI | CCRYGG | 1 cut(s) | 1094 |
| BtgZI | GCGATG | 1 cut(s) | 673 |
| BtsCI | GGATG | 6 cut(s) | 739, 889, 1070, 1555, 1594, 1616 |
| BtsIMutI | CAGTG | 4 cut(s) | 328, 588, 803, 1348 |
| Cac8I | GCNNGC | 1 cut(s) | 1091 |
| CciI | TCATGA | 1 cut(s) | 919 |
| CfoI | GCGC | 1 cut(s) | 153 |
| Cfr10I | RCCGGY | 1 cut(s) | 229 |
| Cfr13I | GGNCC | 3 cut(s) | 528, 669, 1237 |
| CseI | GACGC | 1 cut(s) | 1617 |
| Csp6I | GTAC | 3 cut(s) | 182, 385, 1538 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 242, 277 |
| CviAII | CATG | 9 cut(s) | 86, 201, 677, 920, 981, 1141, 1241, 1565, 1625 |
| CviQI | GTAC | 3 cut(s) | 182, 385, 1538 |
| DdeI | CTNAG | 6 cut(s) | 335, 665, 846, 1281, 1378, 1541 |
| DpnI | GATC | 6 cut(s) | 266, 347, 435, 552, 823, 1032 |
| DpnII | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1296 |
| Eam1104I | CTCTTC | 3 cut(s) | 281, 516, 1304 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1296 |
| EarI | CTCTTC | 3 cut(s) | 281, 516, 1304 |
| Eco130I | CCWWGG | 1 cut(s) | 1521 |
| Eco147I | AGGCCT | 1 cut(s) | 421 |
| Eco31I | GGTCTC | 1 cut(s) | 917 |
| Eco32I | GATATC | 3 cut(s) | 237, 559, 917 |
| Eco47I | GGWCC | 2 cut(s) | 669, 1237 |
| Eco57I | CTGAAG | 1 cut(s) | 158 |
| Eco81I | CCTNAGG | 1 cut(s) | 665 |
| EcoO109I | RGGNCCY | 1 cut(s) | 669 |
| EcoRII | CCWGG | 3 cut(s) | 416, 577, 729 |
| EcoRV | GATATC | 3 cut(s) | 237, 559, 917 |
| EcoT14I | CCWWGG | 1 cut(s) | 1521 |
| ErhI | CCWWGG | 1 cut(s) | 1521 |
| FaeI | CATG | 9 cut(s) | 89, 204, 680, 923, 984, 1144, 1244, 1568, 1628 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 986, 1018 |
| FaqI | GGGAC | 4 cut(s) | 1112, 1250, 1315, 1494 |
| FatI | CATG | 9 cut(s) | 85, 200, 676, 919, 980, 1140, 1240, 1564, 1624 |
| FauNDI | CATATG | 1 cut(s) | 447 |
| FbaI | TGATCA | 2 cut(s) | 345, 550 |
| Fnu4HI | GCNGC | 4 cut(s) | 154, 1000, 1440, 1647 |
| FokI | GGATG | 6 cut(s) | 746, 876, 1057, 1562, 1601, 1603 |
| Fsp4HI | GCNGC | 4 cut(s) | 154, 1000, 1440, 1647 |
| FspBI | CTAG | 2 cut(s) | 1533, 1667 |
| GlaI | GCGC | 1 cut(s) | 152 |
| GluI | GCNGC | 4 cut(s) | 154, 1000, 1440, 1647 |
| GsaI | CCCAGC | 2 cut(s) | 968, 1452 |
| GsuI | CTGGAG | 1 cut(s) | 257 |
| HaeIII | GGCC | 4 cut(s) | 280, 416, 421, 529 |
| HapII | CCGG | 3 cut(s) | 230, 356, 927 |
| HgaI | GACGC | 1 cut(s) | 1617 |
| HhaI | GCGC | 1 cut(s) | 153 |
| Hin1II | CATG | 9 cut(s) | 89, 204, 680, 923, 984, 1144, 1244, 1568, 1628 |
| Hin6I | GCGC | 1 cut(s) | 151 |
| HinP1I | GCGC | 1 cut(s) | 151 |
| HincII | GTYRAC | 1 cut(s) | 511 |
| HindII | GTYRAC | 1 cut(s) | 511 |
| HinfI | GANTC | 7 cut(s) | 352, 482, 713, 971, 1328, 1526, 1682 |
| HpaII | CCGG | 3 cut(s) | 230, 356, 927 |
| HphI | GGTGA | 3 cut(s) | 244, 707, 1139 |
| Hpy166II | GTNNAC | 3 cut(s) | 511, 588, 1463 |
| Hpy188I | TCNGA | 5 cut(s) | 177, 550, 829, 1327, 1381 |
| Hpy8I | GTNNAC | 3 cut(s) | 511, 588, 1463 |
| HpyAV | CCTTC | 8 cut(s) | 432, 647, 1021, 1118, 1154, 1227, 1376, 1497 |
| HpyCH4III | ACNGT | 9 cut(s) | 181, 332, 610, 685, 695, 779, 1082, 1178, 1460 |
| HpyCH4IV | ACGT | 1 cut(s) | 362 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 197, 250, 277, 1445 |
| HpyF3I | CTNAG | 6 cut(s) | 335, 665, 846, 1281, 1378, 1541 |
| HpySE526I | ACGT | 1 cut(s) | 362 |
| Hsp92II | CATG | 9 cut(s) | 89, 204, 680, 923, 984, 1144, 1244, 1568, 1628 |
| HspAI | GCGC | 1 cut(s) | 151 |
| Kpn2I | TCCGGA | 1 cut(s) | 355 |
| Ksp22I | TGATCA | 2 cut(s) | 345, 550 |
| Kzo9I | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| LmnI | GCTCC | 3 cut(s) | 276, 330, 1411 |
| Lsp1109I | GCAGC | 3 cut(s) | 986, 1426, 1633 |
| LweI | GCATC | 5 cut(s) | 14, 650, 733, 802, 1540 |
| MaeI | CTAG | 2 cut(s) | 1533, 1667 |
| MaeII | ACGT | 1 cut(s) | 362 |
| MaeIII | GTNAC | 2 cut(s) | 37, 319 |
| MalI | GATC | 6 cut(s) | 266, 347, 435, 552, 823, 1032 |
| MboI | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| MfeI | CAATTG | 1 cut(s) | 96 |
| MflI | RGATCY | 2 cut(s) | 821, 1030 |
| MhlI | GDGCHC | 2 cut(s) | 246, 273 |
| MlyI | GAGTC | 1 cut(s) | 1337 |
| MmeI | TCCRAC | 1 cut(s) | 1644 |
| MroI | TCCGGA | 1 cut(s) | 355 |
| MseI | TTAA | 8 cut(s) | 455, 471, 911, 1212, 1245, 1319, 1689, 1699 |
| MspI | CCGG | 3 cut(s) | 230, 356, 927 |
| MspR9I | CCNGG | 3 cut(s) | 418, 579, 731 |
| MunI | CAATTG | 1 cut(s) | 96 |
| MvaI | CCWGG | 3 cut(s) | 418, 579, 731 |
| MvnI | CGCG | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 197, 250, 277, 1445 |
| NdeI | CATATG | 1 cut(s) | 447 |
| NdeII | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| NlaIII | CATG | 9 cut(s) | 89, 204, 680, 923, 984, 1144, 1244, 1568, 1628 |
| NlaIV | GGNNCC | 3 cut(s) | 823, 1032, 1238 |
| NmeAIII | GCCGAG | 2 cut(s) | 306, 466 |
| NmuCI | GTSAC | 1 cut(s) | 37 |
| NspI | RCATGY | 2 cut(s) | 984, 1568 |
| NspV | TTCGAA | 2 cut(s) | 54, 751 |
| PagI | TCATGA | 1 cut(s) | 919 |
| PceI | AGGCCT | 1 cut(s) | 421 |
| PciI | ACATGT | 1 cut(s) | 980 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1102 |
| PfeI | GAWTC | 6 cut(s) | 352, 482, 713, 971, 1526, 1682 |
| PkrI | GCNGC | 4 cut(s) | 155, 1001, 1441, 1648 |
| PleI | GAGTC | 1 cut(s) | 1336 |
| PpsI | GAGTC | 1 cut(s) | 1336 |
| PpuMI | RGGWCCY | 1 cut(s) | 669 |
| PscI | ACATGT | 1 cut(s) | 980 |
| Psp5II | RGGWCCY | 1 cut(s) | 669 |
| Psp6I | CCWGG | 3 cut(s) | 416, 577, 729 |
| PspFI | CCCAGC | 2 cut(s) | 964, 1448 |
| PspGI | CCWGG | 3 cut(s) | 416, 577, 729 |
| PspN4I | GGNNCC | 3 cut(s) | 823, 1032, 1238 |
| PspPI | GGNCC | 3 cut(s) | 528, 669, 1237 |
| PspPPI | RGGWCCY | 1 cut(s) | 669 |
| PstI | CTGCAG | 1 cut(s) | 940 |
| PsuI | RGATCY | 2 cut(s) | 821, 1030 |
| RsaI | GTAC | 3 cut(s) | 183, 386, 1539 |
| RsaNI | GTAC | 3 cut(s) | 182, 385, 1538 |
| SaqAI | TTAA | 8 cut(s) | 455, 471, 911, 1212, 1245, 1319, 1689, 1699 |
| SatI | GCNGC | 4 cut(s) | 154, 1000, 1440, 1647 |
| Sau3AI | GATC | 6 cut(s) | 264, 345, 433, 550, 821, 1030 |
| Sau96I | GGNCC | 3 cut(s) | 528, 669, 1237 |
| ScaI | AGTACT | 2 cut(s) | 386, 1539 |
| SchI | GAGTC | 1 cut(s) | 1337 |
| ScrFI | CCNGG | 3 cut(s) | 418, 579, 731 |
| SduI | GDGCHC | 2 cut(s) | 246, 273 |
| SfaNI | GCATC | 5 cut(s) | 14, 650, 733, 802, 1540 |
| SfcI | CTRYAG | 1 cut(s) | 936 |
| SfuI | TTCGAA | 2 cut(s) | 54, 751 |
| SinI | GGWCC | 2 cut(s) | 669, 1237 |
| SmlI | CTYRAG | 3 cut(s) | 947, 1466, 1492 |
| SmoI | CTYRAG | 3 cut(s) | 947, 1466, 1492 |
| SseBI | AGGCCT | 1 cut(s) | 421 |
| SsiI | CCGC | 3 cut(s) | 153, 1572, 1649 |
| SspMI | CTAG | 2 cut(s) | 1533, 1667 |
| StuI | AGGCCT | 1 cut(s) | 421 |
| StyD4I | CCNGG | 3 cut(s) | 416, 577, 729 |
| StyI | CCWWGG | 1 cut(s) | 1521 |
| TaaI | ACNGT | 9 cut(s) | 181, 332, 610, 685, 695, 779, 1082, 1178, 1460 |
| TaiI | ACGT | 1 cut(s) | 365 |
| TaqI | TCGA | 5 cut(s) | 54, 187, 603, 751, 1502 |
| TatI | WGTACW | 2 cut(s) | 384, 1537 |
| TauI | GCSGC | 1 cut(s) | 156 |
| TfiI | GAWTC | 6 cut(s) | 352, 482, 713, 971, 1526, 1682 |
| Tru1I | TTAA | 8 cut(s) | 455, 471, 911, 1212, 1245, 1319, 1689, 1699 |
| Tru9I | TTAA | 8 cut(s) | 455, 471, 911, 1212, 1245, 1319, 1689, 1699 |
| TscAI | CASTG | 4 cut(s) | 335, 595, 803, 1348 |
| TseFI | GTSAC | 1 cut(s) | 37 |
| TseI | GCWGC | 3 cut(s) | 999, 1439, 1646 |
| Tsp45I | GTSAC | 1 cut(s) | 37 |
| TspDTI | ATGAA | 6 cut(s) | 74, 84, 665, 750, 1574, 1670 |
| TspRI | CASTG | 4 cut(s) | 335, 595, 803, 1348 |
| VpaK11BI | GGWCC | 2 cut(s) | 669, 1237 |
| XapI | RAATTY | 3 cut(s) | 206, 1247, 1272 |
| XceI | RCATGY | 2 cut(s) | 984, 1568 |
| XspI | CTAG | 2 cut(s) | 1533, 1667 |
| ZrmI | AGTACT | 2 cut(s) | 386, 1539 |