ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAE1_CUT1_RppA | PF08392 | 109 - 398 | 1.8e-142 | FAE1/Type III polyketide synthase-like protein |
| ACP_syn_III_C | PF08541 | 416 - 496 | 1.3e-09 | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal |
| Chal_sti_synt_C | PF02797 | 418 - 492 | 7.8e-08 | Chalcone and stilbene synthases, C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 28 |
| AatII | GACGTC | 1 cut(s) | 26 |
| AccB1I | GGYRCC | 1 cut(s) | 1561 |
| AccBSI | CCGCTC | 3 cut(s) | 193, 879, 960 |
| AccI | GTMKAC | 1 cut(s) | 324 |
| AcoI | YGGCCR | 2 cut(s) | 338, 1086 |
| AcsI | RAATTY | 2 cut(s) | 106, 1584 |
| AcyI | GRCGYC | 2 cut(s) | 23, 677 |
| AfaI | GTAC | 7 cut(s) | 99, 134, 176, 269, 353, 863, 968 |
| AfeI | AGCGCT | 1 cut(s) | 485 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 202, 342, 528, 550, 858 |
| AflIII | ACRYGT | 1 cut(s) | 504 |
| AgsI | TTSAA | 7 cut(s) | 80, 670, 1198, 1234, 1335, 1465, 1495 |
| AjnI | CCWGG | 4 cut(s) | 401, 456, 560, 801 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 338, 370 |
| AluBI | AGCT | 9 cut(s) | 142, 262, 430, 441, 604, 663, 715, 735, 796 |
| AluI | AGCT | 9 cut(s) | 142, 262, 430, 441, 604, 663, 715, 735, 796 |
| Alw21I | GWGCWC | 3 cut(s) | 401, 810, 1251 |
| Alw26I | GTCTC | 3 cut(s) | 14, 283, 687 |
| Alw44I | GTGCAC | 2 cut(s) | 397, 806 |
| Ama87I | CYCGRG | 3 cut(s) | 380, 494, 515 |
| Aor51HI | AGCGCT | 1 cut(s) | 485 |
| AoxI | GGCC | 8 cut(s) | 338, 490, 519, 558, 766, 1086, 1101, 1129 |
| ApaLI | GTGCAC | 2 cut(s) | 397, 806 |
| ApeKI | GCWGC | 5 cut(s) | 604, 660, 793, 920, 1574 |
| ApoI | RAATTY | 2 cut(s) | 106, 1584 |
| AspLEI | GCGC | 3 cut(s) | 16, 393, 486 |
| AspS9I | GGNCC | 4 cut(s) | 256, 423, 1102, 1130 |
| AsuC2I | CCSGG | 1 cut(s) | 337 |
| AsuHPI | GGTGA | 4 cut(s) | 277, 322, 592, 664 |
| AvaI | CYCGRG | 3 cut(s) | 380, 494, 515 |
| AvaII | GGWCC | 2 cut(s) | 256, 423 |
| AxyI | CCTNAGG | 1 cut(s) | 630 |
| BaeGI | GKGCMC | 2 cut(s) | 401, 810 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1240, 1273 |
| BanI | GGYRCC | 1 cut(s) | 1561 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 131, 163 |
| BbsI | GAAGAC | 3 cut(s) | 301, 620, 1502 |
| Bbv12I | GWGCWC | 3 cut(s) | 401, 810, 1251 |
| BbvCI | CCTCAGC | 1 cut(s) | 527 |
| BbvI | GCAGC | 5 cut(s) | 591, 672, 805, 907, 1586 |
| BccI | CCATC | 5 cut(s) | 78, 571, 745, 932, 1285 |
| BceAI | ACGGC | 3 cut(s) | 506, 664, 1073 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 968, 1002 |
| BciT130I | CCWGG | 4 cut(s) | 403, 458, 562, 803 |
| BciVI | GTATCC | 1 cut(s) | 1268 |
| BcnI | CCSGG | 1 cut(s) | 337 |
| BcoDI | GTCTC | 3 cut(s) | 14, 283, 687 |
| BfaI | CTAG | 2 cut(s) | 827, 1368 |
| BfmI | CTRYAG | 1 cut(s) | 1134 |
| BfoI | RGCGCY | 2 cut(s) | 17, 487 |
| BfuI | GTATCC | 1 cut(s) | 1268 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1100 |
| BglII | AGATCT | 1 cut(s) | 408 |
| BisI | GCNGC | 8 cut(s) | 201, 605, 661, 794, 921, 955, 958, 1575 |
| BlsI | GCNGC | 8 cut(s) | 202, 606, 662, 795, 922, 956, 959, 1576 |
| BmcAI | AGTACT | 1 cut(s) | 99 |
| Bme1390I | CCNGG | 5 cut(s) | 337, 403, 458, 562, 803 |
| Bme18I | GGWCC | 2 cut(s) | 256, 423 |
| BmeT110I | CYCGRG | 3 cut(s) | 380, 494, 515 |
| BmgT120I | GGNCC | 4 cut(s) | 256, 423, 1102, 1130 |
| BmiI | GGNNCC | 4 cut(s) | 257, 534, 1329, 1563 |
| BmrFI | CCNGG | 5 cut(s) | 337, 403, 458, 562, 803 |
| BoxI | GACNNNNGTC | 1 cut(s) | 320 |
| BpiI | GAAGAC | 3 cut(s) | 301, 620, 1502 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1089, 1121 |
| BpmI | CTGGAG | 4 cut(s) | 280, 500, 629, 785 |
| Bpu10I | CCTNAGC | 2 cut(s) | 527, 1407 |
| BpuEI | CTTGAG | 2 cut(s) | 113, 248 |
| BpuMI | CCSGG | 1 cut(s) | 337 |
| BsaAI | YACGTR | 2 cut(s) | 136, 507 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| BsaHI | GRCGYC | 2 cut(s) | 23, 677 |
| BsaJI | CCNNGG | 7 cut(s) | 341, 402, 493, 516, 693, 1126, 1526 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 11, 41, 146, 176, 263, 293 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 202, 342, 528, 550, 858 |
| Bse1I | ACTGG | 1 cut(s) | 1395 |
| Bse21I | CCTNAGG | 1 cut(s) | 630 |
| Bse3DI | GCAATG | 1 cut(s) | 877 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseBI | CCWGG | 4 cut(s) | 403, 458, 562, 803 |
| BseDI | CCNNGG | 7 cut(s) | 341, 402, 493, 516, 693, 1126, 1526 |
| BseGI | GGATG | 6 cut(s) | 41, 756, 924, 1221, 1291, 1440 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 202, 342, 528, 550, 858 |
| BseMI | GCAATG | 1 cut(s) | 877 |
| BseMII | CTCAG | 3 cut(s) | 518, 1017, 1392 |
| BseNI | ACTGG | 1 cut(s) | 1395 |
| BseRI | GAGGAG | 3 cut(s) | 569, 878, 920 |
| BseSI | GKGCMC | 2 cut(s) | 401, 810 |
| BseX3I | CGGCCG | 1 cut(s) | 338 |
| BseXI | GCAGC | 5 cut(s) | 591, 672, 805, 907, 1586 |
| Bsh1285I | CGRYCG | 1 cut(s) | 341 |
| BshFI | GGCC | 8 cut(s) | 340, 492, 521, 560, 768, 1088, 1103, 1131 |
| BshNI | GGYRCC | 1 cut(s) | 1561 |
| BsiEI | CGRYCG | 1 cut(s) | 341 |
| BsiHKAI | GWGCWC | 3 cut(s) | 401, 810, 1251 |
| BsiHKCI | CYCGRG | 3 cut(s) | 380, 494, 515 |
| BsiSI | CCGG | 3 cut(s) | 17, 337, 1095 |
| BslFI | GGGAC | 3 cut(s) | 173, 269, 1440 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 202, 342, 528, 550, 858 |
| BsmAI | GTCTC | 3 cut(s) | 14, 283, 687 |
| BsmBI | CGTCTC | 3 cut(s) | 14, 283, 687 |
| BsmFI | GGGAC | 3 cut(s) | 173, 269, 1440 |
| BsmI | GAATGC | 2 cut(s) | 1241, 1448 |
| BsnI | GGCC | 8 cut(s) | 340, 492, 521, 560, 768, 1088, 1103, 1131 |
| BsoBI | CYCGRG | 3 cut(s) | 380, 494, 515 |
| Bsp1286I | GDGCHC | 3 cut(s) | 401, 810, 1251 |
| Bsp1407I | TGTACA | 1 cut(s) | 174 |
| Bsp143I | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| Bsp19I | CCATGG | 1 cut(s) | 693 |
| BspANI | GGCC | 8 cut(s) | 340, 492, 521, 560, 768, 1088, 1103, 1131 |
| BspCNI | CTCAG | 3 cut(s) | 519, 1016, 1393 |
| BspLI | GGNNCC | 4 cut(s) | 257, 534, 1329, 1563 |
| BspT107I | GGYRCC | 1 cut(s) | 1561 |
| BsrBI | CCGCTC | 3 cut(s) | 193, 879, 960 |
| BsrDI | GCAATG | 1 cut(s) | 877 |
| BsrGI | TGTACA | 1 cut(s) | 174 |
| BsrI | ACTGG | 1 cut(s) | 1395 |
| BssECI | CCNNGG | 7 cut(s) | 341, 402, 493, 516, 693, 1126, 1526 |
| BssMI | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| BssNI | GRCGYC | 2 cut(s) | 23, 677 |
| BssT1I | CCWWGG | 2 cut(s) | 693, 1526 |
| Bst2UI | CCWGG | 4 cut(s) | 403, 458, 562, 803 |
| Bst4CI | ACNGT | 5 cut(s) | 289, 322, 985, 1475, 1501 |
| Bst6I | CTCTTC | 2 cut(s) | 908, 1408 |
| BstACI | GRCGYC | 2 cut(s) | 23, 677 |
| BstAUI | TGTACA | 1 cut(s) | 174 |
| BstBAI | YACGTR | 2 cut(s) | 136, 507 |
| BstC8I | GCNNGC | 1 cut(s) | 766 |
| BstDEI | CTNAG | 7 cut(s) | 90, 527, 630, 716, 1003, 1401, 1407 |
| BstDSI | CCRYGG | 1 cut(s) | 693 |
| BstEII | GGTNACC | 1 cut(s) | 146 |
| BstF5I | GGATG | 6 cut(s) | 41, 756, 924, 1221, 1291, 1440 |
| BstH2I | RGCGCY | 2 cut(s) | 17, 487 |
| BstHHI | GCGC | 3 cut(s) | 16, 393, 486 |
| BstKTI | GATC | 4 cut(s) | 162, 411, 784, 1212 |
| BstMAI | GTCTC | 3 cut(s) | 14, 283, 687 |
| BstMBI | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| BstMCI | CGRYCG | 1 cut(s) | 341 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 209, 765, 876, 1100, 1109, 1327 |
| BstNI | CCWGG | 4 cut(s) | 403, 458, 562, 803 |
| BstNSI | RCATGY | 1 cut(s) | 397 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 320 |
| BstPI | GGTNACC | 1 cut(s) | 146 |
| BstSCI | CCNGG | 5 cut(s) | 335, 401, 456, 560, 801 |
| BstSFI | CTRYAG | 1 cut(s) | 1134 |
| BstSLI | GKGCMC | 2 cut(s) | 401, 810 |
| BstV1I | GCAGC | 5 cut(s) | 591, 672, 805, 907, 1586 |
| BstV2I | GAAGAC | 3 cut(s) | 301, 620, 1502 |
| BstX2I | RGATCY | 1 cut(s) | 408 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1268 |
| BstYI | RGATCY | 1 cut(s) | 408 |
| BstZI | CGGCCG | 1 cut(s) | 338 |
| Bsu36I | CCTNAGG | 1 cut(s) | 630 |
| BsuI | GTATCC | 1 cut(s) | 1268 |
| BsuRI | GGCC | 8 cut(s) | 340, 492, 521, 560, 768, 1088, 1103, 1131 |
| BtgI | CCRYGG | 1 cut(s) | 693 |
| BtsCI | GGATG | 6 cut(s) | 41, 756, 924, 1221, 1291, 1440 |
| BtsI | GCAGTG | 2 cut(s) | 766, 1284 |
| BtsIMutI | CAGTG | 4 cut(s) | 766, 1284, 1311, 1480 |
| Cac8I | GCNNGC | 1 cut(s) | 766 |
| CfoI | GCGC | 3 cut(s) | 16, 393, 486 |
| Cfr13I | GGNCC | 4 cut(s) | 256, 423, 1102, 1130 |
| CseI | GACGC | 1 cut(s) | 685 |
| Csp6I | GTAC | 7 cut(s) | 98, 133, 175, 268, 352, 862, 967 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 727, 762 |
| CviAII | CATG | 9 cut(s) | 74, 172, 394, 415, 694, 838, 976, 1147, 1262 |
| CviQI | GTAC | 7 cut(s) | 98, 133, 175, 268, 352, 862, 967 |
| DdeI | CTNAG | 7 cut(s) | 90, 527, 630, 716, 1003, 1401, 1407 |
| DpnI | GATC | 4 cut(s) | 161, 410, 783, 1211 |
| DpnII | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 28 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 28 |
| EaeI | YGGCCR | 2 cut(s) | 338, 1086 |
| EagI | CGGCCG | 1 cut(s) | 338 |
| Eam1104I | CTCTTC | 2 cut(s) | 908, 1408 |
| EarI | CTCTTC | 2 cut(s) | 908, 1408 |
| EciI | GGCGGA | 1 cut(s) | 587 |
| EclXI | CGGCCG | 1 cut(s) | 338 |
| Eco130I | CCWWGG | 2 cut(s) | 693, 1526 |
| Eco47I | GGWCC | 2 cut(s) | 256, 423 |
| Eco47III | AGCGCT | 1 cut(s) | 485 |
| Eco52I | CGGCCG | 1 cut(s) | 338 |
| Eco81I | CCTNAGG | 1 cut(s) | 630 |
| Eco88I | CYCGRG | 3 cut(s) | 380, 494, 515 |
| Eco91I | GGTNACC | 1 cut(s) | 146 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1102 |
| EcoO65I | GGTNACC | 1 cut(s) | 146 |
| EcoRII | CCWGG | 4 cut(s) | 401, 456, 560, 801 |
| EcoT14I | CCWWGG | 2 cut(s) | 693, 1526 |
| ErhI | CCWWGG | 2 cut(s) | 693, 1526 |
| Esp3I | CGTCTC | 3 cut(s) | 14, 283, 687 |
| FaeI | CATG | 9 cut(s) | 77, 175, 397, 418, 697, 841, 979, 1150, 1265 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 257, 289, 338, 370 |
| FaqI | GGGAC | 3 cut(s) | 173, 269, 1440 |
| FatI | CATG | 9 cut(s) | 73, 171, 393, 414, 693, 837, 975, 1146, 1261 |
| FauI | CCCGC | 1 cut(s) | 198 |
| FauNDI | CATATG | 2 cut(s) | 820, 1323 |
| FblI | GTMKAC | 1 cut(s) | 324 |
| Fnu4HI | GCNGC | 8 cut(s) | 201, 605, 661, 794, 921, 955, 958, 1575 |
| FokI | GGATG | 6 cut(s) | 28, 763, 911, 1208, 1298, 1447 |
| Fsp4HI | GCNGC | 8 cut(s) | 201, 605, 661, 794, 921, 955, 958, 1575 |
| FspBI | CTAG | 2 cut(s) | 827, 1368 |
| GlaI | GCGC | 3 cut(s) | 15, 392, 485 |
| GluI | GCNGC | 8 cut(s) | 201, 605, 661, 794, 921, 955, 958, 1575 |
| GsuI | CTGGAG | 4 cut(s) | 280, 500, 629, 785 |
| HaeII | RGCGCY | 2 cut(s) | 17, 487 |
| HaeIII | GGCC | 8 cut(s) | 340, 492, 521, 560, 768, 1088, 1103, 1131 |
| HapII | CCGG | 3 cut(s) | 17, 337, 1095 |
| HgaI | GACGC | 1 cut(s) | 685 |
| HhaI | GCGC | 3 cut(s) | 16, 393, 486 |
| Hin1I | GRCGYC | 2 cut(s) | 23, 677 |
| Hin1II | CATG | 9 cut(s) | 77, 175, 397, 418, 697, 841, 979, 1150, 1265 |
| Hin6I | GCGC | 3 cut(s) | 14, 391, 484 |
| HinP1I | GCGC | 3 cut(s) | 14, 391, 484 |
| HincII | GTYRAC | 1 cut(s) | 361 |
| HindII | GTYRAC | 1 cut(s) | 361 |
| HindIII | AAGCTT | 1 cut(s) | 713 |
| HinfI | GANTC | 7 cut(s) | 475, 643, 703, 1056, 1342, 1522, 1540 |
| HpaI | GTTAAC | 1 cut(s) | 361 |
| HpaII | CCGG | 3 cut(s) | 17, 337, 1095 |
| HphI | GGTGA | 4 cut(s) | 277, 322, 592, 664 |
| Hpy166II | GTNNAC | 5 cut(s) | 325, 352, 361, 399, 808 |
| Hpy188I | TCNGA | 8 cut(s) | 105, 448, 675, 908, 949, 1006, 1153, 1402 |
| Hpy188III | TCNNGA | 5 cut(s) | 313, 479, 892, 1198, 1335 |
| Hpy8I | GTNNAC | 5 cut(s) | 325, 352, 361, 399, 808 |
| Hpy99I | CGWCG | 6 cut(s) | 28, 31, 34, 37, 40, 679 |
| HpyAV | CCTTC | 4 cut(s) | 340, 559, 1341, 1480 |
| HpyCH4III | ACNGT | 5 cut(s) | 289, 322, 985, 1475, 1501 |
| HpyCH4IV | ACGT | 3 cut(s) | 23, 135, 506 |
| HpyCH4V | TGCA | 7 cut(s) | 399, 418, 660, 759, 808, 979, 1448 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 209, 765, 876, 1100, 1109, 1327 |
| HpyF3I | CTNAG | 7 cut(s) | 90, 527, 630, 716, 1003, 1401, 1407 |
| HpySE526I | ACGT | 3 cut(s) | 23, 135, 506 |
| Hsp92I | GRCGYC | 2 cut(s) | 23, 677 |
| Hsp92II | CATG | 9 cut(s) | 77, 175, 397, 418, 697, 841, 979, 1150, 1265 |
| HspAI | GCGC | 3 cut(s) | 14, 391, 484 |
| KspAI | GTTAAC | 1 cut(s) | 361 |
| Kzo9I | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| LmnI | GCTCC | 7 cut(s) | 198, 299, 438, 481, 891, 965, 1327 |
| Lsp1109I | GCAGC | 5 cut(s) | 591, 672, 805, 907, 1586 |
| MaeI | CTAG | 2 cut(s) | 827, 1368 |
| MaeII | ACGT | 3 cut(s) | 23, 135, 506 |
| MaeIII | GTNAC | 5 cut(s) | 82, 146, 283, 371, 1469 |
| MalI | GATC | 4 cut(s) | 161, 410, 783, 1211 |
| MbiI | CCGCTC | 3 cut(s) | 193, 879, 960 |
| MboI | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| MfeI | CAATTG | 1 cut(s) | 856 |
| MflI | RGATCY | 1 cut(s) | 408 |
| MhlI | GDGCHC | 3 cut(s) | 401, 810, 1251 |
| MluCI | AATT | 4 cut(s) | 106, 655, 856, 1584 |
| MlyI | GAGTC | 1 cut(s) | 1336 |
| MmeI | TCCRAC | 5 cut(s) | 189, 698, 931, 960, 1263 |
| MseI | TTAA | 4 cut(s) | 360, 1347, 1581, 1594 |
| MslI | CAYNNNNRTG | 3 cut(s) | 509, 698, 1266 |
| MspI | CCGG | 3 cut(s) | 17, 337, 1095 |
| MspR9I | CCNGG | 5 cut(s) | 337, 403, 458, 562, 803 |
| MunI | CAATTG | 1 cut(s) | 856 |
| Mva1269I | GAATGC | 2 cut(s) | 1241, 1448 |
| MvaI | CCWGG | 4 cut(s) | 403, 458, 562, 803 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 209, 765, 876, 1100, 1109, 1327 |
| NciI | CCSGG | 1 cut(s) | 337 |
| NcoI | CCATGG | 1 cut(s) | 693 |
| NdeI | CATATG | 2 cut(s) | 820, 1323 |
| NdeII | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| NlaIII | CATG | 9 cut(s) | 77, 175, 397, 418, 697, 841, 979, 1150, 1265 |
| NlaIV | GGNNCC | 4 cut(s) | 257, 534, 1329, 1563 |
| NmeAIII | GCCGAG | 2 cut(s) | 366, 1107 |
| NmuCI | GTSAC | 1 cut(s) | 283 |
| NspI | RCATGY | 1 cut(s) | 397 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 29, 32, 35 |
| PctI | GAATGC | 2 cut(s) | 1241, 1448 |
| PfeI | GAWTC | 6 cut(s) | 475, 643, 703, 1056, 1522, 1540 |
| PflFI | GACNNNGTC | 2 cut(s) | 25, 679 |
| PkrI | GCNGC | 8 cut(s) | 202, 606, 662, 795, 922, 956, 959, 1576 |
| PleI | GAGTC | 1 cut(s) | 1336 |
| PpsI | GAGTC | 1 cut(s) | 1336 |
| Ppu21I | YACGTR | 2 cut(s) | 136, 507 |
| PshAI | GACNNNNGTC | 1 cut(s) | 320 |
| Psp6I | CCWGG | 4 cut(s) | 401, 456, 560, 801 |
| PspEI | GGTNACC | 1 cut(s) | 146 |
| PspGI | CCWGG | 4 cut(s) | 401, 456, 560, 801 |
| PspN4I | GGNNCC | 4 cut(s) | 257, 534, 1329, 1563 |
| PspPI | GGNCC | 4 cut(s) | 256, 423, 1102, 1130 |
| PsuI | RGATCY | 1 cut(s) | 408 |
| PsyI | GACNNNGTC | 2 cut(s) | 25, 679 |
| RsaI | GTAC | 7 cut(s) | 99, 134, 176, 269, 353, 863, 968 |
| RsaNI | GTAC | 7 cut(s) | 98, 133, 175, 268, 352, 862, 967 |
| RseI | CAYNNNNRTG | 3 cut(s) | 509, 698, 1266 |
| SaqAI | TTAA | 4 cut(s) | 360, 1347, 1581, 1594 |
| SatI | GCNGC | 8 cut(s) | 201, 605, 661, 794, 921, 955, 958, 1575 |
| Sau3AI | GATC | 4 cut(s) | 159, 408, 781, 1209 |
| Sau96I | GGNCC | 4 cut(s) | 256, 423, 1102, 1130 |
| ScaI | AGTACT | 1 cut(s) | 99 |
| SchI | GAGTC | 1 cut(s) | 1336 |
| ScrFI | CCNGG | 5 cut(s) | 337, 403, 458, 562, 803 |
| SduI | GDGCHC | 3 cut(s) | 401, 810, 1251 |
| SfcI | CTRYAG | 1 cut(s) | 1134 |
| SinI | GGWCC | 2 cut(s) | 256, 423 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 509, 698, 1266 |
| SmlI | CTYRAG | 2 cut(s) | 128, 263 |
| SmoI | CTYRAG | 2 cut(s) | 128, 263 |
| Sse9I | AATT | 4 cut(s) | 106, 655, 856, 1584 |
| SspI | AATATT | 1 cut(s) | 727 |
| SspMI | CTAG | 2 cut(s) | 827, 1368 |
| StyD4I | CCNGG | 5 cut(s) | 335, 401, 456, 560, 801 |
| StyI | CCWWGG | 2 cut(s) | 693, 1526 |
| TaaI | ACNGT | 5 cut(s) | 289, 322, 985, 1475, 1501 |
| TaiI | ACGT | 3 cut(s) | 26, 138, 509 |
| TaqI | TCGA | 3 cut(s) | 234, 893, 1245 |
| TasI | AATT | 4 cut(s) | 106, 655, 856, 1584 |
| TatI | WGTACW | 4 cut(s) | 97, 174, 267, 351 |
| TauI | GCSGC | 3 cut(s) | 203, 957, 960 |
| TfiI | GAWTC | 6 cut(s) | 475, 643, 703, 1056, 1522, 1540 |
| Tru1I | TTAA | 4 cut(s) | 360, 1347, 1581, 1594 |
| Tru9I | TTAA | 4 cut(s) | 360, 1347, 1581, 1594 |
| TscAI | CASTG | 4 cut(s) | 766, 1284, 1318, 1480 |
| TseFI | GTSAC | 1 cut(s) | 283 |
| TseI | GCWGC | 5 cut(s) | 604, 660, 793, 920, 1574 |
| Tsp45I | GTSAC | 1 cut(s) | 283 |
| TspDTI | ATGAA | 5 cut(s) | 403, 1217, 1365, 1401, 1532 |
| TspGWI | ACGGA | 2 cut(s) | 109, 271 |
| TspRI | CASTG | 4 cut(s) | 766, 1284, 1318, 1480 |
| Tth111I | GACNNNGTC | 2 cut(s) | 25, 679 |
| VneI | GTGCAC | 2 cut(s) | 397, 806 |
| VpaK11BI | GGWCC | 2 cut(s) | 256, 423 |
| XapI | RAATTY | 2 cut(s) | 106, 1584 |
| XceI | RCATGY | 1 cut(s) | 397 |
| XmiI | GTMKAC | 1 cut(s) | 324 |
| XspI | CTAG | 2 cut(s) | 827, 1368 |
| ZraI | GACGTC | 1 cut(s) | 24 |
| ZrmI | AGTACT | 1 cut(s) | 99 |