Rw5G045990

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000049
Physical Location & Seq
Forward (+)
80066915 .. 80069085
2171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G045990.1

Sequence Viewer

Length: 846 bp
ATGGCGGGTCTATCGCTCTTTGCAGTTGGTGGTGGACCTAATGGCTCAGTAAGAGGTGCTTGTGCTAAGTCTGGAGAGGTTAGGGTTTTACCAAACCCTAGGAATGGTTTGAATGAACCTAGGGTTTCTTCTGGTTTGGGGTTGCTTCAAGGGGAGGCTGCAGTTAGGGCTACACATCATAAAAACCAAGCTGCATTCTTTTCTGCTCATCTTAACTCCGGGCTACAGGCAGCTAGCTTGTTGAAGAAGATAGTCAAGCCGATTCCTTTATCTGTGCAGCCTAAGCATGGTCTGGAAAGCAATAAGGTTACTGCTTCTCCTGGTGCTTTATTTATTCAGGCATGCGAGAATGGGGGTGCTACTGCTCCTGGTTTGGGTAGTGTCCCAGGGTCTCTTAGTGGACTGAATAGGCCAGCTAAGATCATGATGCGTCCAGGGAAGAAGTTGATGGCATTGCCTACACCGAATATGGCTGGGATCAAGGGAAGGAAACGTTTCCTCAAAAGGCTTGAGGATGAGGTGGAGGTGTCTCATGTTCCTACAGATAAGGAACCTGCTGAAACTATTGAAGAGGTGATGATTGCAATGGTTGATTCGGCGTTACCTGTGAAGGAACAGAATGCTGGGAATGAGATGGAGGAGCAGGACGTGGCTTCAGTTTCATCTACAGAGGGTCATCTGCTGATTTCCAGTGCAAAGGAATCGGGGCTCGGATTAGGTGTTTATCACAGCCGGCACCTCGTCATTCAGTGGGCTGCTACAGAGATGAGGCACCGTCGAAGGAGTGCACCTCTGGTGATCAAGGAAGCATCAAGGTTGACGAGCATCGGTCTTTTGCCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

281

Amino Acids

29.59

Weight (kDa)

9.62

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 562
AccB1I GGYRCC 2 cut(s) 735, 771
AciI CCGC 1 cut(s) 5
AclI AACGTT 1 cut(s) 493
AclWI GGATC 1 cut(s) 485
AcuI CTGAAG 1 cut(s) 639
AfiI CCNNNNNNNGG 3 cut(s) 104, 287, 374
AgsI TTSAA 4 cut(s) 112, 149, 244, 569
AjiI CACGTC 1 cut(s) 649
AjnI CCWGG 4 cut(s) 319, 367, 385, 433
AluBI AGCT 4 cut(s) 191, 233, 237, 416
AluI AGCT 4 cut(s) 191, 233, 237, 416
Alw21I GWGCWC 1 cut(s) 790
Alw26I GTCTC 2 cut(s) 396, 534
Alw44I GTGCAC 1 cut(s) 786
AlwI GGATC 1 cut(s) 485
AoxI GGCC 1 cut(s) 410
ApaLI GTGCAC 1 cut(s) 786
ApeKI GCWGC 5 cut(s) 158, 191, 230, 277, 755
Asp700I GAANNNNTTC 1 cut(s) 494
AspA2I CCTAGG 2 cut(s) 98, 119
AspS9I GGNCC 1 cut(s) 35
AsuC2I CCSGG 1 cut(s) 220
AsuHPI GGTGA 2 cut(s) 586, 808
AsuNHI GCTAGC 1 cut(s) 233
AvaII GGWCC 1 cut(s) 35
AvrII CCTAGG 2 cut(s) 98, 119
BaeGI GKGCMC 1 cut(s) 790
BanI GGYRCC 2 cut(s) 735, 771
BanII GRGCYC 1 cut(s) 711
Bbv12I GWGCWC 1 cut(s) 790
BbvI GCAGC 5 cut(s) 145, 178, 242, 289, 742
BccI CCATC 2 cut(s) 442, 628
BcgI CGANNNNNNTGC 2 cut(s) 684, 718
BciT130I CCWGG 4 cut(s) 321, 369, 387, 435
BclI TGATCA 1 cut(s) 798
BcnI CCSGG 1 cut(s) 220
BcoDI GTCTC 2 cut(s) 396, 534
BfaI CTAG 3 cut(s) 99, 120, 234
BfmI CTRYAG 5 cut(s) 159, 224, 540, 666, 759
BfuAI ACCTGC 1 cut(s) 562
BisI GCNGC 5 cut(s) 159, 192, 231, 278, 756
BlnI CCTAGG 2 cut(s) 98, 119
BlsI GCNGC 5 cut(s) 160, 193, 232, 279, 757
Bme1390I CCNGG 5 cut(s) 220, 321, 369, 387, 435
Bme18I GGWCC 1 cut(s) 35
BmgBI CACGTC 1 cut(s) 649
BmgT120I GGNCC 1 cut(s) 35
BmiI GGNNCC 3 cut(s) 552, 737, 773
BmrFI CCNGG 5 cut(s) 220, 321, 369, 387, 435
BmsI GCATC 3 cut(s) 417, 818, 834
BmtI GCTAGC 1 cut(s) 237
BplI GAGNNNNNCTC 2 cut(s) 775, 807
BpmI CTGGAG 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 282
BpuEI CTTGAG 1 cut(s) 530
BpuMI CCSGG 1 cut(s) 220
BsaI GGTCTC 1 cut(s) 396
BsaJI CCNNGG 5 cut(s) 98, 119, 385, 386, 434
BsaXI ACNNNNNCTCC 2 cut(s) 301, 331
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 287, 374
Bse118I RCCGGY 1 cut(s) 732
Bse1I ACTGG 1 cut(s) 690
Bse3DI GCAATG 2 cut(s) 452, 591
BseBI CCWGG 4 cut(s) 321, 369, 387, 435
BseDI CCNNGG 5 cut(s) 98, 119, 385, 386, 434
BseGI GGATG 1 cut(s) 520
BseLI CCNNNNNNNGG 3 cut(s) 104, 287, 374
BseMI GCAATG 2 cut(s) 452, 591
BseMII CTCAG 1 cut(s) 60
BseNI ACTGG 1 cut(s) 690
BseRI GAGGAG 1 cut(s) 653
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 5 cut(s) 145, 178, 242, 289, 742
BseYI CCCAGC 2 cut(s) 473, 623
BsgI GTGCAG 1 cut(s) 296
BshFI GGCC 1 cut(s) 412
BshNI GGYRCC 2 cut(s) 735, 771
BsiHKAI GWGCWC 1 cut(s) 790
BsiSI CCGG 2 cut(s) 219, 733
BslFI GGGAC 1 cut(s) 368
BslI CCNNNNNNNGG 3 cut(s) 104, 287, 374
BsmAI GTCTC 2 cut(s) 396, 534
BsmFI GGGAC 1 cut(s) 368
BsmI GAATGC 2 cut(s) 194, 625
BsnI GGCC 1 cut(s) 412
Bso31I GGTCTC 1 cut(s) 396
Bsp1286I GDGCHC 2 cut(s) 711, 790
Bsp143I GATC 3 cut(s) 420, 477, 798
BspACI CCGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 412
BspCNI CTCAG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 3 cut(s) 552, 737, 773
BspMAI CTGCAG 1 cut(s) 163
BspMI ACCTGC 1 cut(s) 562
BspOI GCTAGC 1 cut(s) 237
BspPI GGATC 1 cut(s) 485
BspT107I GGYRCC 2 cut(s) 735, 771
BspTNI GGTCTC 1 cut(s) 396
BsrDI GCAATG 2 cut(s) 452, 591
BsrFI RCCGGY 1 cut(s) 732
BsrI ACTGG 1 cut(s) 690
BssAI RCCGGY 1 cut(s) 732
BssECI CCNNGG 5 cut(s) 98, 119, 385, 386, 434
BssMI GATC 3 cut(s) 420, 477, 798
BssT1I CCWWGG 2 cut(s) 98, 119
Bst2UI CCWGG 4 cut(s) 321, 369, 387, 435
Bst4CI ACNGT 1 cut(s) 776
Bst6I CTCTTC 1 cut(s) 564
BstC8I GCNNGC 4 cut(s) 235, 343, 414, 734
BstDEI CTNAG 5 cut(s) 46, 66, 282, 395, 417
BstF5I GGATG 1 cut(s) 520
BstKTI GATC 3 cut(s) 423, 480, 801
BstMAI GTCTC 2 cut(s) 396, 534
BstMBI GATC 3 cut(s) 420, 477, 798
BstMWI GCNNNNNNNGC 2 cut(s) 167, 283
BstNI CCWGG 4 cut(s) 321, 369, 387, 435
BstNSI RCATGY 1 cut(s) 345
BstSCI CCNGG 5 cut(s) 218, 319, 367, 385, 433
BstSFI CTRYAG 5 cut(s) 159, 224, 540, 666, 759
BstSLI GKGCMC 1 cut(s) 790
BstV1I GCAGC 5 cut(s) 145, 178, 242, 289, 742
BsuRI GGCC 1 cut(s) 412
BtrI CACGTC 1 cut(s) 649
BtsCI GGATG 1 cut(s) 520
BtsIMutI CAGTG 2 cut(s) 697, 755
BveI ACCTGC 1 cut(s) 562
Cac8I GCNNGC 4 cut(s) 235, 343, 414, 734
CciI TCATGA 1 cut(s) 423
Cfr10I RCCGGY 1 cut(s) 732
Cfr13I GGNCC 1 cut(s) 35
CseI GACGC 1 cut(s) 419
CviAII CATG 4 cut(s) 287, 342, 424, 533
DdeI CTNAG 5 cut(s) 46, 66, 282, 395, 417
DpnI GATC 3 cut(s) 422, 479, 800
DpnII GATC 3 cut(s) 420, 477, 798
Eam1104I CTCTTC 1 cut(s) 564
EarI CTCTTC 1 cut(s) 564
Eco130I CCWWGG 2 cut(s) 98, 119
Eco24I GRGCYC 1 cut(s) 711
Eco31I GGTCTC 1 cut(s) 396
Eco47I GGWCC 1 cut(s) 35
Eco57I CTGAAG 1 cut(s) 639
EcoRII CCWGG 4 cut(s) 319, 367, 385, 433
EcoT14I CCWWGG 2 cut(s) 98, 119
EcoT38I GRGCYC 1 cut(s) 711
ErhI CCWWGG 2 cut(s) 98, 119
FaeI CATG 4 cut(s) 290, 345, 427, 536
FaiI YATR 6 cut(s) 180, 288, 343, 425, 470, 534
FalI AAGNNNNNCTT 2 cut(s) 43, 75
FaqI GGGAC 1 cut(s) 368
FatI CATG 4 cut(s) 286, 341, 423, 532
FbaI TGATCA 1 cut(s) 798
Fnu4HI GCNGC 5 cut(s) 159, 192, 231, 278, 756
FokI GGATG 1 cut(s) 527
FriOI GRGCYC 1 cut(s) 711
Fsp4HI GCNGC 5 cut(s) 159, 192, 231, 278, 756
FspBI CTAG 3 cut(s) 99, 120, 234
GluI GCNGC 5 cut(s) 159, 192, 231, 278, 756
GsaI CCCAGC 2 cut(s) 477, 627
GsuI CTGGAG 1 cut(s) 93
HaeIII GGCC 1 cut(s) 412
HapII CCGG 2 cut(s) 219, 733
HgaI GACGC 1 cut(s) 419
Hin1II CATG 4 cut(s) 290, 345, 427, 536
HincII GTYRAC 1 cut(s) 819
HindII GTYRAC 1 cut(s) 819
HinfI GANTC 3 cut(s) 262, 593, 701
HpaII CCGG 2 cut(s) 219, 733
HphI GGTGA 2 cut(s) 586, 808
Hpy166II GTNNAC 4 cut(s) 35, 401, 788, 819
Hpy188I TCNGA 1 cut(s) 713
Hpy188III TCNNGA 3 cut(s) 72, 293, 424
Hpy8I GTNNAC 4 cut(s) 35, 401, 788, 819
Hpy99I CGWCG 1 cut(s) 780
HpyAV CCTTC 3 cut(s) 480, 604, 774
HpyCH4III ACNGT 1 cut(s) 776
HpyCH4IV ACGT 2 cut(s) 493, 648
HpyCH4V TGCA 7 cut(s) 23, 161, 194, 277, 584, 695, 788
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 283
HpyF3I CTNAG 5 cut(s) 46, 66, 282, 395, 417
HpySE526I ACGT 2 cut(s) 493, 648
Hsp92II CATG 4 cut(s) 290, 345, 427, 536
KroI GCCGGC 1 cut(s) 732
KroNI GCCGGC 1 cut(s) 734
Ksp22I TGATCA 1 cut(s) 798
Kzo9I GATC 3 cut(s) 420, 477, 798
LmnI GCTCC 2 cut(s) 370, 640
Lsp1109I GCAGC 5 cut(s) 145, 178, 242, 289, 742
LweI GCATC 3 cut(s) 417, 818, 834
MaeI CTAG 3 cut(s) 99, 120, 234
MaeII ACGT 2 cut(s) 493, 648
MaeIII GTNAC 2 cut(s) 307, 600
MalI GATC 3 cut(s) 422, 479, 800
MboI GATC 3 cut(s) 420, 477, 798
MboII GAAGA 5 cut(s) 120, 256, 259, 451, 581
MhlI GDGCHC 2 cut(s) 711, 790
MroNI GCCGGC 1 cut(s) 732
MroXI GAANNNNTTC 1 cut(s) 494
MseI TTAA 1 cut(s) 213
MspI CCGG 2 cut(s) 219, 733
MspR9I CCNGG 5 cut(s) 220, 321, 369, 387, 435
Mva1269I GAATGC 2 cut(s) 194, 625
MvaI CCWGG 4 cut(s) 321, 369, 387, 435
MwoI GCNNNNNNNGC 2 cut(s) 167, 283
NaeI GCCGGC 1 cut(s) 734
NciI CCSGG 1 cut(s) 220
NdeII GATC 3 cut(s) 420, 477, 798
NgoMIV GCCGGC 1 cut(s) 732
NheI GCTAGC 1 cut(s) 233
NlaIII CATG 4 cut(s) 290, 345, 427, 536
NlaIV GGNNCC 3 cut(s) 552, 737, 773
NspI RCATGY 1 cut(s) 345
PaeI GCATGC 1 cut(s) 345
PagI TCATGA 1 cut(s) 423
PasI CCCWGGG 1 cut(s) 386
PctI GAATGC 2 cut(s) 194, 625
PdiI GCCGGC 1 cut(s) 734
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 3 cut(s) 262, 593, 701
PkrI GCNGC 5 cut(s) 160, 193, 232, 279, 757
Psp1406I AACGTT 1 cut(s) 493
Psp6I CCWGG 4 cut(s) 319, 367, 385, 433
PspFI CCCAGC 2 cut(s) 473, 623
PspGI CCWGG 4 cut(s) 319, 367, 385, 433
PspN4I GGNNCC 3 cut(s) 552, 737, 773
PspPI GGNCC 1 cut(s) 35
PstI CTGCAG 1 cut(s) 163
SaqAI TTAA 1 cut(s) 213
SatI GCNGC 5 cut(s) 159, 192, 231, 278, 756
Sau3AI GATC 3 cut(s) 420, 477, 798
Sau96I GGNCC 1 cut(s) 35
ScrFI CCNGG 5 cut(s) 220, 321, 369, 387, 435
SduI GDGCHC 2 cut(s) 711, 790
SfaNI GCATC 3 cut(s) 417, 818, 834
SfcI CTRYAG 5 cut(s) 159, 224, 540, 666, 759
SinI GGWCC 1 cut(s) 35
SmlI CTYRAG 1 cut(s) 509
SmoI CTYRAG 1 cut(s) 509
SphI GCATGC 1 cut(s) 345
SsiI CCGC 1 cut(s) 5
SspMI CTAG 3 cut(s) 99, 120, 234
StyD4I CCNGG 5 cut(s) 218, 319, 367, 385, 433
StyI CCWWGG 2 cut(s) 98, 119
TaaI ACNGT 1 cut(s) 776
TaiI ACGT 2 cut(s) 496, 651
TaqI TCGA 1 cut(s) 778
TaqII GACCGA 1 cut(s) 818
TfiI GAWTC 3 cut(s) 262, 593, 701
Tru1I TTAA 1 cut(s) 213
Tru9I TTAA 1 cut(s) 213
TscAI CASTG 2 cut(s) 697, 755
TseI GCWGC 5 cut(s) 158, 191, 230, 277, 755
TspDTI ATGAA 2 cut(s) 129, 651
TspRI CASTG 2 cut(s) 697, 755
VneI GTGCAC 1 cut(s) 786
VpaK11BI GGWCC 1 cut(s) 35
XceI RCATGY 1 cut(s) 345
XmaJI CCTAGG 2 cut(s) 98, 119
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 3 cut(s) 99, 120, 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.