Rmu_sc0008991.1_g000011

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008991.1
OG0000049
Physical Location & Seq
Reverse (-)
39764 .. 41125
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008991.1_g000011.1.cds

Sequence Viewer

Length: 1206 bp
atggctggtaggctattagcaccgaaagtcaagttcccgggtttcaaagggaccattgccactatttggcgtgtcaaatcgggtctcactatacaagatgccggaaagtgttttatttttcagttcgacagtgaagcggtgcgtaatcgtatcttgcatgggggtccttggttctaccgcaataccatgctggtggtaggagagtatgatgggatttgtccagtggaggatgtgtcgctgaatacaatggcggcttgggctgagaaacaagaatgcgcttgcgttgtgagaaggaaggaagaggaacagaggataaaaattctgttcgacattcgtcgtcgaatccgcacctggaaggtgttcgagttctccgcaatcgtgaagccggagctttccttcatttatgagaaggttaagggcttctgtcgcgattgtggtttgttcctccatgatgctctaggttgtgataagcagctgatcaaagaaaatgaggaggttaaggctcttccaccggcgtcggccatggctggtctgactcttaactcagggtcggcgataaatcagtcactggtgttgcctgtccaggttcaagagaatgtgggctggagtcagggagatattacagctcgggttcttatggaggaagaattgggttctgaaggtgtggacgtaggggtaccatctgtggggaagggaggccatgcgtcactcactaatcttggcctgggatgcaagataatggatactcccatgactttggagaaagcacggtctgacattagagatgtgggatccgggcaacttcctgtactccaagaacagattgaagggagctcaatgattatggcccccgcatcggtgatgtctcgaaaggaggttgtgaagttctcctcgatgcaagtggtgccagtggggaggaaaaggaaggctgttcccaagttcgatcggttcgggaaaaagtacttggcttttcctgaatcgatacttgaggttaaagataacgtatcgctggtgcgcaacaaaagcatggcaagatatgtgtctcgcctaagaaaaagaaagttgggcgtcccaagggaagacaaagttggcaaaccagtgacgggattggaggagatgaatgtgactactcctgcaatagaactcgcagctgtggagataccggtggaatgtgagcgctcacattctaccactgttttagtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

401

Amino Acids

44.43

Weight (kDa)

9.1

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1016
Acc65I GGTACC 1 cut(s) 676
AccB1I GGYRCC 2 cut(s) 676, 904
AccB7I CCANNNNNTGG 1 cut(s) 66
AccII CGCG 1 cut(s) 429
AciI CCGC 6 cut(s) 137, 178, 251, 346, 372, 852
AclWI GGATC 2 cut(s) 786, 799
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 1 cut(s) 318
AcuI CTGAAG 1 cut(s) 678
AcyI GRCGYC 2 cut(s) 515, 1068
AfaI GTAC 3 cut(s) 678, 810, 962
AfeI AGCGCT 1 cut(s) 1178
AfiI CCNNNNNNNGG 4 cut(s) 66, 686, 856, 1103
AgeI ACCGGT 1 cut(s) 1162
AgsI TTSAA 3 cut(s) 46, 590, 827
AjnI CCWGG 3 cut(s) 350, 582, 723
AjuI GAANNNNNNNTTGG 4 cut(s) 947, 979, 1071, 1103
AluBI AGCT 5 cut(s) 391, 475, 626, 834, 1151
AluI AGCT 5 cut(s) 391, 475, 626, 834, 1151
Alw21I GWGCWC 1 cut(s) 836
Alw26I GTCTC 3 cut(s) 89, 870, 1047
AlwI GGATC 2 cut(s) 786, 799
AlwNI CAGNNNCTG 1 cut(s) 568
Ama87I CYCGRG 2 cut(s) 37, 627
Aor51HI AGCGCT 1 cut(s) 1178
AoxI GGCC 4 cut(s) 519, 697, 721, 846
ApeKI GCWGC 2 cut(s) 472, 1148
ApoI RAATTY 1 cut(s) 318
AsiGI ACCGGT 1 cut(s) 1162
Asp700I GAANNNNTTC 1 cut(s) 359
Asp718I GGTACC 1 cut(s) 676
AspLEI GCGC 3 cut(s) 278, 1017, 1179
AspS9I GGNCC 3 cut(s) 51, 164, 847
AsuC2I CCSGG 3 cut(s) 38, 39, 796
AsuHPI GGTGA 1 cut(s) 871
AvaI CYCGRG 2 cut(s) 37, 627
AvaII GGWCC 2 cut(s) 51, 164
BamHI GGATCC 1 cut(s) 791
BanI GGYRCC 2 cut(s) 676, 904
BanII GRGCYC 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 1086
Bbv12I GWGCWC 1 cut(s) 836
BbvI GCAGC 2 cut(s) 484, 1160
BccI CCATC 2 cut(s) 203, 688
BciT130I CCWGG 3 cut(s) 352, 584, 725
BciVI GTATCC 1 cut(s) 736
BclI TGATCA 1 cut(s) 477
BcnI CCSGG 3 cut(s) 38, 39, 796
BcoDI GTCTC 3 cut(s) 89, 870, 1047
BfaI CTAG 1 cut(s) 458
BfoI RGCGCY 1 cut(s) 1180
BfuI GTATCC 1 cut(s) 736
BisI GCNGC 3 cut(s) 252, 473, 1149
BlsI GCNGC 3 cut(s) 253, 474, 1150
BmcAI AGTACT 1 cut(s) 962
Bme1390I CCNGG 6 cut(s) 38, 39, 352, 584, 725, 796
Bme18I GGWCC 2 cut(s) 51, 164
BmeT110I CYCGRG 2 cut(s) 37, 627
BmgT120I GGNCC 3 cut(s) 51, 164, 847
BmiI GGNNCC 6 cut(s) 52, 165, 678, 793, 849, 906
BmrFI CCNGG 6 cut(s) 38, 39, 352, 584, 725, 796
BmsI GCATC 5 cut(s) 88, 442, 719, 863, 885
BoxI GACNNNNGTC 1 cut(s) 333
BpiI GAAGAC 1 cut(s) 1086
BpmI CTGGAG 1 cut(s) 625
BpuEI CTTGAG 1 cut(s) 1007
BpuMI CCSGG 3 cut(s) 38, 39, 796
Bsa29I ATCGAT 1 cut(s) 980
BsaHI GRCGYC 2 cut(s) 515, 1068
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 5 cut(s) 37, 167, 522, 724, 1073
BsaWI WCCGGW 1 cut(s) 1162
BsaXI ACNNNNNCTCC 2 cut(s) 218, 248
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 686, 856, 1103
Bse118I RCCGGY 2 cut(s) 511, 1162
Bse1I ACTGG 4 cut(s) 221, 573, 908, 1097
Bse3DI GCAATG 1 cut(s) 54
BseBI CCWGG 3 cut(s) 352, 584, 725
BseCI ATCGAT 1 cut(s) 980
BseDI CCNNGG 5 cut(s) 37, 167, 522, 724, 1073
BseGI GGATG 2 cut(s) 235, 734
BseLI CCNNNNNNNGG 4 cut(s) 66, 686, 856, 1103
BseMI GCAATG 1 cut(s) 54
BseMII CTCAG 2 cut(s) 252, 558
BseNI ACTGG 4 cut(s) 221, 573, 908, 1097
BseRI GAGGAG 3 cut(s) 506, 880, 1127
BseXI GCAGC 2 cut(s) 484, 1160
Bsh1236I CGCG 1 cut(s) 429
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 4 cut(s) 521, 699, 723, 848
BshNI GGYRCC 2 cut(s) 676, 904
BshTI ACCGGT 1 cut(s) 1162
BshVI ATCGAT 1 cut(s) 980
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 1 cut(s) 836
BsiHKCI CYCGRG 2 cut(s) 37, 627
BsiSI CCGG 6 cut(s) 38, 102, 386, 512, 795, 1163
BslFI GGGAC 2 cut(s) 64, 1055
BslI CCNNNNNNNGG 4 cut(s) 66, 686, 856, 1103
BsmAI GTCTC 3 cut(s) 89, 870, 1047
BsmFI GGGAC 2 cut(s) 64, 1055
BsmI GAATGC 1 cut(s) 278
BsnI GGCC 4 cut(s) 521, 699, 723, 848
Bso31I GGTCTC 1 cut(s) 89
BsoBI CYCGRG 2 cut(s) 37, 627
Bsp1286I GDGCHC 1 cut(s) 836
Bsp143I GATC 3 cut(s) 477, 791, 943
Bsp19I CCATGG 1 cut(s) 522
Bsp68I TCGCGA 1 cut(s) 429
BspACI CCGC 6 cut(s) 137, 178, 251, 346, 372, 852
BspANI GGCC 4 cut(s) 521, 699, 723, 848
BspCNI CTCAG 2 cut(s) 253, 557
BspDI ATCGAT 1 cut(s) 980
BspFNI CGCG 1 cut(s) 429
BspLI GGNNCC 6 cut(s) 52, 165, 678, 793, 849, 906
BspPI GGATC 2 cut(s) 786, 799
BspQI GCTCTTC 1 cut(s) 510
BspT107I GGYRCC 2 cut(s) 676, 904
BspTNI GGTCTC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 54
BsrFI RCCGGY 2 cut(s) 511, 1162
BsrI ACTGG 4 cut(s) 221, 573, 908, 1097
BssAI RCCGGY 2 cut(s) 511, 1162
BssECI CCNNGG 5 cut(s) 37, 167, 522, 724, 1073
BssMI GATC 3 cut(s) 477, 791, 943
BssNI GRCGYC 2 cut(s) 515, 1068
BssT1I CCWWGG 3 cut(s) 167, 522, 1073
Bst2UI CCWGG 3 cut(s) 352, 584, 725
Bst4CI ACNGT 3 cut(s) 131, 771, 1195
Bst6I CTCTTC 2 cut(s) 294, 510
BstACI GRCGYC 2 cut(s) 515, 1068
BstAPI GCANNNNNTGC 1 cut(s) 904
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 3 cut(s) 261, 544, 1049
BstDSI CCRYGG 1 cut(s) 522
BstF5I GGATG 2 cut(s) 235, 734
BstFNI CGCG 1 cut(s) 429
BstH2I RGCGCY 1 cut(s) 1180
BstHHI GCGC 3 cut(s) 278, 1017, 1179
BstKTI GATC 3 cut(s) 480, 794, 946
BstMAI GTCTC 3 cut(s) 89, 870, 1047
BstMBI GATC 3 cut(s) 477, 791, 943
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 5 cut(s) 257, 426, 729, 904, 1023
BstNI CCWGG 3 cut(s) 352, 584, 725
BstPAI GACNNNNGTC 1 cut(s) 333
BstSCI CCNGG 6 cut(s) 36, 37, 350, 582, 723, 794
BstUI CGCG 1 cut(s) 429
BstV1I GCAGC 2 cut(s) 484, 1160
BstV2I GAAGAC 1 cut(s) 1086
BstX2I RGATCY 1 cut(s) 791
BstXI CCANNNNNNTGG 2 cut(s) 193, 757
BstYI RGATCY 1 cut(s) 791
Bsu15I ATCGAT 1 cut(s) 980
BsuI GTATCC 1 cut(s) 736
BsuRI GGCC 4 cut(s) 521, 699, 723, 848
BsuTUI ATCGAT 1 cut(s) 980
BtgI CCRYGG 1 cut(s) 522
BtsCI GGATG 2 cut(s) 235, 734
BtsIMutI CAGTG 6 cut(s) 136, 228, 566, 915, 1104, 1191
BtuMI TCGCGA 1 cut(s) 429
Cac8I GCNNGC 1 cut(s) 280
CaiI CAGNNNCTG 1 cut(s) 568
CfoI GCGC 3 cut(s) 278, 1017, 1179
Cfr10I RCCGGY 2 cut(s) 511, 1162
Cfr13I GGNCC 3 cut(s) 51, 164, 847
Cfr9I CCCGGG 1 cut(s) 37
ClaI ATCGAT 1 cut(s) 980
CseI GACGC 3 cut(s) 504, 693, 1057
Csp6I GTAC 3 cut(s) 677, 809, 961
CspAI ACCGGT 1 cut(s) 1162
CviAII CATG 7 cut(s) 158, 187, 449, 523, 701, 751, 1027
CviQI GTAC 3 cut(s) 677, 809, 961
DdeI CTNAG 3 cut(s) 261, 544, 1049
DpnI GATC 3 cut(s) 479, 793, 945
DpnII GATC 3 cut(s) 477, 791, 943
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 2 cut(s) 294, 510
EarI CTCTTC 2 cut(s) 294, 510
Ecl136II GAGCTC 1 cut(s) 834
Eco130I CCWWGG 3 cut(s) 167, 522, 1073
Eco24I GRGCYC 1 cut(s) 836
Eco31I GGTCTC 1 cut(s) 89
Eco47I GGWCC 2 cut(s) 51, 164
Eco47III AGCGCT 1 cut(s) 1178
Eco53kI GAGCTC 1 cut(s) 834
Eco57I CTGAAG 1 cut(s) 678
Eco88I CYCGRG 2 cut(s) 37, 627
EcoICRI GAGCTC 1 cut(s) 834
EcoO109I RGGNCCY 1 cut(s) 164
EcoRII CCWGG 3 cut(s) 350, 582, 723
EcoT14I CCWWGG 3 cut(s) 167, 522, 1073
EcoT38I GRGCYC 1 cut(s) 836
ErhI CCWWGG 3 cut(s) 167, 522, 1073
FaeI CATG 7 cut(s) 161, 190, 452, 526, 704, 754, 1030
FaqI GGGAC 2 cut(s) 64, 1055
FatI CATG 7 cut(s) 157, 186, 448, 522, 700, 750, 1026
FauI CCCGC 1 cut(s) 859
FbaI TGATCA 1 cut(s) 477
Fnu4HI GCNGC 3 cut(s) 252, 473, 1149
FokI GGATG 2 cut(s) 242, 741
FriOI GRGCYC 1 cut(s) 836
Fsp4HI GCNGC 3 cut(s) 252, 473, 1149
FspBI CTAG 1 cut(s) 458
FspI TGCGCA 1 cut(s) 1016
GlaI GCGC 3 cut(s) 277, 1016, 1178
GluI GCNGC 3 cut(s) 252, 473, 1149
GsuI CTGGAG 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 1180
HaeIII GGCC 4 cut(s) 521, 699, 723, 848
HapII CCGG 6 cut(s) 38, 102, 386, 512, 795, 1163
HgaI GACGC 3 cut(s) 504, 693, 1057
HhaI GCGC 3 cut(s) 278, 1017, 1179
Hin1I GRCGYC 2 cut(s) 515, 1068
Hin1II CATG 7 cut(s) 161, 190, 452, 526, 704, 754, 1030
Hin6I GCGC 3 cut(s) 276, 1015, 1177
HinP1I GCGC 3 cut(s) 276, 1015, 1177
HinfI GANTC 4 cut(s) 342, 535, 607, 977
HpaII CCGG 6 cut(s) 38, 102, 386, 512, 795, 1163
HphI GGTGA 1 cut(s) 871
Hpy166II GTNNAC 1 cut(s) 667
Hpy188I TCNGA 3 cut(s) 534, 658, 775
Hpy188III TCNNGA 6 cut(s) 379, 428, 590, 867, 952, 974
Hpy8I GTNNAC 1 cut(s) 667
Hpy99I CGWCG 3 cut(s) 339, 342, 520
HpyAV CCTTC 9 cut(s) 285, 289, 349, 403, 406, 653, 685, 821, 919
HpyCH4III ACNGT 3 cut(s) 131, 771, 1195
HpyCH4IV ACGT 2 cut(s) 669, 1002
HpyCH4V TGCA 4 cut(s) 157, 732, 898, 1136
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 426, 729, 904, 1023
HpyF3I CTNAG 3 cut(s) 261, 544, 1049
HpySE526I ACGT 2 cut(s) 669, 1002
Hsp92I GRCGYC 2 cut(s) 515, 1068
Hsp92II CATG 7 cut(s) 161, 190, 452, 526, 704, 754, 1030
HspAI GCGC 3 cut(s) 276, 1015, 1177
KpnI GGTACC 1 cut(s) 680
Ksp22I TGATCA 1 cut(s) 477
Kzo9I GATC 3 cut(s) 477, 791, 943
LguI GCTCTTC 1 cut(s) 510
LmnI GCTCC 2 cut(s) 388, 831
Lsp1109I GCAGC 2 cut(s) 484, 1160
LweI GCATC 5 cut(s) 88, 442, 719, 863, 885
MaeI CTAG 1 cut(s) 458
MaeII ACGT 2 cut(s) 669, 1002
MaeIII GTNAC 4 cut(s) 564, 705, 1099, 1123
MalI GATC 3 cut(s) 479, 793, 945
MboI GATC 3 cut(s) 477, 791, 943
MboII GAAGA 4 cut(s) 311, 497, 656, 1091
MflI RGATCY 1 cut(s) 791
MhlI GDGCHC 1 cut(s) 836
MluCI AATT 2 cut(s) 318, 647
MlyI GAGTC 2 cut(s) 529, 616
MroXI GAANNNNTTC 1 cut(s) 359
MseI TTAA 4 cut(s) 414, 498, 540, 993
MslI CAYNNNNRTG 1 cut(s) 191
MspA1I CMGCKG 2 cut(s) 475, 1151
MspI CCGG 6 cut(s) 38, 102, 386, 512, 795, 1163
MspR9I CCNGG 6 cut(s) 38, 39, 352, 584, 725, 796
Mva1269I GAATGC 1 cut(s) 278
MvaI CCWGG 3 cut(s) 352, 584, 725
MvnI CGCG 1 cut(s) 429
MwoI GCNNNNNNNGC 5 cut(s) 257, 426, 729, 904, 1023
NciI CCSGG 3 cut(s) 38, 39, 796
NcoI CCATGG 1 cut(s) 522
NdeII GATC 3 cut(s) 477, 791, 943
NlaIII CATG 7 cut(s) 161, 190, 452, 526, 704, 754, 1030
NlaIV GGNNCC 6 cut(s) 52, 165, 678, 793, 849, 906
NmuCI GTSAC 4 cut(s) 564, 705, 1099, 1123
NruI TCGCGA 1 cut(s) 429
NsbI TGCGCA 1 cut(s) 1016
PciSI GCTCTTC 1 cut(s) 510
PctI GAATGC 1 cut(s) 278
PdmI GAANNNNTTC 1 cut(s) 359
PfeI GAWTC 2 cut(s) 342, 977
PflMI CCANNNNNTGG 1 cut(s) 66
PinAI ACCGGT 1 cut(s) 1162
PkrI GCNGC 3 cut(s) 253, 474, 1150
Ple19I CGATCG 1 cut(s) 946
PleI GAGTC 2 cut(s) 529, 615
PpsI GAGTC 2 cut(s) 529, 615
PpuMI RGGWCCY 1 cut(s) 164
PshAI GACNNNNGTC 1 cut(s) 333
Psp124BI GAGCTC 1 cut(s) 836
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 3 cut(s) 350, 582, 723
PspGI CCWGG 3 cut(s) 350, 582, 723
PspN4I GGNNCC 6 cut(s) 52, 165, 678, 793, 849, 906
PspPI GGNCC 3 cut(s) 51, 164, 847
PspPPI RGGWCCY 1 cut(s) 164
PstNI CAGNNNCTG 1 cut(s) 568
PsuI RGATCY 1 cut(s) 791
PvuI CGATCG 1 cut(s) 946
PvuII CAGCTG 2 cut(s) 475, 1151
RruI TCGCGA 1 cut(s) 429
RsaI GTAC 3 cut(s) 678, 810, 962
RsaNI GTAC 3 cut(s) 677, 809, 961
RseI CAYNNNNRTG 1 cut(s) 191
SacI GAGCTC 1 cut(s) 836
SapI GCTCTTC 1 cut(s) 510
SaqAI TTAA 4 cut(s) 414, 498, 540, 993
SatI GCNGC 3 cut(s) 252, 473, 1149
Sau3AI GATC 3 cut(s) 477, 791, 943
Sau96I GGNCC 3 cut(s) 51, 164, 847
ScaI AGTACT 1 cut(s) 962
SchI GAGTC 2 cut(s) 529, 616
ScrFI CCNGG 6 cut(s) 38, 39, 352, 584, 725, 796
SduI GDGCHC 1 cut(s) 836
SfaNI GCATC 5 cut(s) 88, 442, 719, 863, 885
SgrAI CRCCGGYG 1 cut(s) 511
SinI GGWCC 2 cut(s) 51, 164
SmaI CCCGGG 1 cut(s) 39
SmiMI CAYNNNNRTG 1 cut(s) 191
SmlI CTYRAG 1 cut(s) 986
SmoI CTYRAG 1 cut(s) 986
Sse9I AATT 2 cut(s) 318, 647
SsiI CCGC 6 cut(s) 137, 178, 251, 346, 372, 852
SspMI CTAG 1 cut(s) 458
SstI GAGCTC 1 cut(s) 836
StyD4I CCNGG 6 cut(s) 36, 37, 350, 582, 723, 794
StyI CCWWGG 3 cut(s) 167, 522, 1073
TaaI ACNGT 3 cut(s) 131, 771, 1195
TaiI ACGT 2 cut(s) 672, 1005
TaqI TCGA 8 cut(s) 126, 327, 340, 363, 868, 893, 942, 980
TasI AATT 2 cut(s) 318, 647
TatI WGTACW 2 cut(s) 808, 960
TauI GCSGC 1 cut(s) 254
TfiI GAWTC 2 cut(s) 342, 977
Tru1I TTAA 4 cut(s) 414, 498, 540, 993
Tru9I TTAA 4 cut(s) 414, 498, 540, 993
TscAI CASTG 6 cut(s) 136, 228, 573, 915, 1104, 1198
TseFI GTSAC 4 cut(s) 564, 705, 1099, 1123
TseI GCWGC 2 cut(s) 472, 1148
Tsp45I GTSAC 4 cut(s) 564, 705, 1099, 1123
TspDTI ATGAA 2 cut(s) 388, 1133
TspMI CCCGGG 1 cut(s) 37
TspRI CASTG 6 cut(s) 136, 228, 573, 915, 1104, 1198
Van91I CCANNNNNTGG 1 cut(s) 66
VpaK11BI GGWCC 2 cut(s) 51, 164
XapI RAATTY 1 cut(s) 318
XmaI CCCGGG 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 359
XspI CTAG 1 cut(s) 458
ZrmI AGTACT 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.