Belongs to the universal ribosomal protein uL5 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RINGv | PF12906 | 129 - 167 | 1.8e-06 | RING-variant domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 454 |
| AccIII | TCCGGA | 1 cut(s) | 640 |
| AciI | CCGC | 2 cut(s) | 608, 788 |
| AclI | AACGTT | 1 cut(s) | 717 |
| AclWI | GGATC | 2 cut(s) | 599, 632 |
| AcsI | RAATTY | 1 cut(s) | 945 |
| AfaI | GTAC | 2 cut(s) | 441, 628 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 899 |
| AflIII | ACRYGT | 1 cut(s) | 505 |
| AgsI | TTSAA | 3 cut(s) | 513, 538, 559 |
| AjiI | CACGTC | 1 cut(s) | 506 |
| AjnI | CCWGG | 1 cut(s) | 936 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 15, 47 |
| AluBI | AGCT | 6 cut(s) | 26, 406, 527, 653, 833, 890 |
| AluI | AGCT | 6 cut(s) | 26, 406, 527, 653, 833, 890 |
| AlwI | GGATC | 2 cut(s) | 599, 632 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 26 |
| Aor13HI | TCCGGA | 1 cut(s) | 640 |
| AoxI | GGCC | 1 cut(s) | 328 |
| ApeKI | GCWGC | 3 cut(s) | 170, 653, 859 |
| ApoI | RAATTY | 1 cut(s) | 945 |
| AspA2I | CCTAGG | 1 cut(s) | 308 |
| AspLEI | GCGC | 2 cut(s) | 146, 455 |
| AspS9I | GGNCC | 2 cut(s) | 329, 480 |
| AsuHPI | GGTGA | 2 cut(s) | 48, 77 |
| AsuII | TTCGAA | 1 cut(s) | 661 |
| AvaII | GGWCC | 1 cut(s) | 480 |
| AvrII | CCTAGG | 1 cut(s) | 308 |
| BbsI | GAAGAC | 1 cut(s) | 917 |
| BbvCI | CCTCAGC | 1 cut(s) | 27 |
| BbvI | GCAGC | 3 cut(s) | 182, 640, 846 |
| BccI | CCATC | 1 cut(s) | 329 |
| BceAI | ACGGC | 1 cut(s) | 686 |
| BciT130I | CCWGG | 1 cut(s) | 938 |
| BfaI | CTAG | 5 cut(s) | 60, 77, 309, 437, 591 |
| BfmI | CTRYAG | 3 cut(s) | 528, 648, 873 |
| BisI | GCNGC | 3 cut(s) | 171, 654, 860 |
| BlnI | CCTAGG | 1 cut(s) | 308 |
| BlsI | GCNGC | 3 cut(s) | 172, 655, 861 |
| Bme1390I | CCNGG | 1 cut(s) | 938 |
| Bme18I | GGWCC | 1 cut(s) | 480 |
| BmgBI | CACGTC | 1 cut(s) | 506 |
| BmgT120I | GGNCC | 2 cut(s) | 329, 480 |
| BmiI | GGNNCC | 1 cut(s) | 481 |
| BmrFI | CCNGG | 1 cut(s) | 938 |
| BmsI | GCATC | 5 cut(s) | 100, 157, 394, 634, 773 |
| BpiI | GAAGAC | 1 cut(s) | 917 |
| BpmI | CTGGAG | 1 cut(s) | 422 |
| Bpu10I | CCTNAGC | 1 cut(s) | 27 |
| Bpu14I | TTCGAA | 1 cut(s) | 661 |
| BsaJI | CCNNGG | 3 cut(s) | 308, 475, 937 |
| BsaWI | WCCGGW | 1 cut(s) | 640 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 899 |
| Bse1I | ACTGG | 1 cut(s) | 405 |
| Bse3DI | GCAATG | 1 cut(s) | 139 |
| BseAI | TCCGGA | 1 cut(s) | 640 |
| BseBI | CCWGG | 1 cut(s) | 938 |
| BseDI | CCNNGG | 3 cut(s) | 308, 475, 937 |
| BseGI | GGATG | 2 cut(s) | 115, 649 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 899 |
| BseMI | GCAATG | 1 cut(s) | 139 |
| BseMII | CTCAG | 3 cut(s) | 18, 665, 791 |
| BseNI | ACTGG | 1 cut(s) | 405 |
| BseRI | GAGGAG | 2 cut(s) | 186, 882 |
| BseXI | GCAGC | 3 cut(s) | 182, 640, 846 |
| BshFI | GGCC | 1 cut(s) | 330 |
| BsiSI | CCGG | 2 cut(s) | 114, 641 |
| BslFI | GGGAC | 2 cut(s) | 94, 779 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 899 |
| BsmFI | GGGAC | 2 cut(s) | 94, 779 |
| BsnI | GGCC | 1 cut(s) | 330 |
| Bsp119I | TTCGAA | 1 cut(s) | 661 |
| Bsp13I | TCCGGA | 1 cut(s) | 640 |
| Bsp143I | GATC | 2 cut(s) | 604, 637 |
| Bsp19I | CCATGG | 1 cut(s) | 475 |
| BspACI | CCGC | 2 cut(s) | 608, 788 |
| BspANI | GGCC | 1 cut(s) | 330 |
| BspCNI | CTCAG | 3 cut(s) | 19, 666, 790 |
| BspEI | TCCGGA | 1 cut(s) | 640 |
| BspLI | GGNNCC | 1 cut(s) | 481 |
| BspPI | GGATC | 2 cut(s) | 599, 632 |
| BspT104I | TTCGAA | 1 cut(s) | 661 |
| BsrDI | GCAATG | 1 cut(s) | 139 |
| BsrI | ACTGG | 1 cut(s) | 405 |
| BssECI | CCNNGG | 3 cut(s) | 308, 475, 937 |
| BssMI | GATC | 2 cut(s) | 604, 637 |
| BssT1I | CCWWGG | 2 cut(s) | 308, 475 |
| Bst2UI | CCWGG | 1 cut(s) | 938 |
| Bst4CI | ACNGT | 3 cut(s) | 487, 868, 961 |
| BstBI | TTCGAA | 1 cut(s) | 661 |
| BstC8I | GCNNGC | 2 cut(s) | 214, 849 |
| BstDEI | CTNAG | 3 cut(s) | 27, 674, 777 |
| BstDSI | CCRYGG | 1 cut(s) | 475 |
| BstF5I | GGATG | 2 cut(s) | 115, 649 |
| BstHHI | GCGC | 2 cut(s) | 146, 455 |
| BstKTI | GATC | 2 cut(s) | 607, 640 |
| BstMBI | GATC | 2 cut(s) | 604, 637 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 653, 830 |
| BstNI | CCWGG | 1 cut(s) | 938 |
| BstNSI | RCATGY | 2 cut(s) | 216, 617 |
| BstSCI | CCNGG | 1 cut(s) | 936 |
| BstSFI | CTRYAG | 3 cut(s) | 528, 648, 873 |
| BstV1I | GCAGC | 3 cut(s) | 182, 640, 846 |
| BstV2I | GAAGAC | 1 cut(s) | 917 |
| BstX2I | RGATCY | 1 cut(s) | 637 |
| BstYI | RGATCY | 1 cut(s) | 637 |
| BsuRI | GGCC | 1 cut(s) | 330 |
| BtgI | CCRYGG | 1 cut(s) | 475 |
| BtrI | CACGTC | 1 cut(s) | 506 |
| BtsCI | GGATG | 2 cut(s) | 115, 649 |
| BtsIMutI | CAGTG | 2 cut(s) | 46, 483 |
| Cac8I | GCNNGC | 2 cut(s) | 214, 849 |
| CaiI | CAGNNNCTG | 1 cut(s) | 26 |
| CfoI | GCGC | 2 cut(s) | 146, 455 |
| Cfr13I | GGNCC | 2 cut(s) | 329, 480 |
| Csp6I | GTAC | 2 cut(s) | 440, 627 |
| CviAII | CATG | 6 cut(s) | 213, 378, 450, 476, 614, 896 |
| CviQI | GTAC | 2 cut(s) | 440, 627 |
| DdeI | CTNAG | 3 cut(s) | 27, 674, 777 |
| DpnI | GATC | 2 cut(s) | 606, 639 |
| DpnII | GATC | 2 cut(s) | 604, 637 |
| EciI | GGCGGA | 1 cut(s) | 597 |
| Eco130I | CCWWGG | 2 cut(s) | 308, 475 |
| Eco47I | GGWCC | 1 cut(s) | 480 |
| EcoO109I | RGGNCCY | 1 cut(s) | 329 |
| EcoRII | CCWGG | 1 cut(s) | 936 |
| EcoT14I | CCWWGG | 2 cut(s) | 308, 475 |
| EcoT22I | ATGCAT | 1 cut(s) | 218 |
| ErhI | CCWWGG | 2 cut(s) | 308, 475 |
| FaeI | CATG | 6 cut(s) | 216, 381, 453, 479, 617, 899 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 31 |
| FaqI | GGGAC | 2 cut(s) | 94, 779 |
| FatI | CATG | 6 cut(s) | 212, 377, 449, 475, 613, 895 |
| Fnu4HI | GCNGC | 3 cut(s) | 171, 654, 860 |
| FokI | GGATG | 2 cut(s) | 122, 656 |
| Fsp4HI | GCNGC | 3 cut(s) | 171, 654, 860 |
| FspAI | RTGCGCAY | 1 cut(s) | 454 |
| FspBI | CTAG | 5 cut(s) | 60, 77, 309, 437, 591 |
| FspI | TGCGCA | 1 cut(s) | 454 |
| GlaI | GCGC | 2 cut(s) | 145, 454 |
| GluI | GCNGC | 3 cut(s) | 171, 654, 860 |
| GsuI | CTGGAG | 1 cut(s) | 422 |
| HaeIII | GGCC | 1 cut(s) | 330 |
| HapII | CCGG | 2 cut(s) | 114, 641 |
| HhaI | GCGC | 2 cut(s) | 146, 455 |
| Hin1II | CATG | 6 cut(s) | 216, 381, 453, 479, 617, 899 |
| Hin6I | GCGC | 2 cut(s) | 144, 453 |
| HinP1I | GCGC | 2 cut(s) | 144, 453 |
| HincII | GTYRAC | 1 cut(s) | 721 |
| HindII | GTYRAC | 1 cut(s) | 721 |
| HinfI | GANTC | 4 cut(s) | 36, 82, 149, 569 |
| HpaI | GTTAAC | 1 cut(s) | 721 |
| HpaII | CCGG | 2 cut(s) | 114, 641 |
| HphI | GGTGA | 2 cut(s) | 48, 77 |
| Hpy166II | GTNNAC | 5 cut(s) | 442, 483, 503, 701, 721 |
| Hpy188I | TCNGA | 5 cut(s) | 22, 154, 524, 769, 780 |
| Hpy188III | TCNNGA | 5 cut(s) | 101, 239, 286, 389, 641 |
| Hpy8I | GTNNAC | 5 cut(s) | 442, 483, 503, 701, 721 |
| HpyAV | CCTTC | 2 cut(s) | 41, 657 |
| HpyCH4III | ACNGT | 3 cut(s) | 487, 868, 961 |
| HpyCH4IV | ACGT | 2 cut(s) | 505, 717 |
| HpyCH4V | TGCA | 6 cut(s) | 170, 216, 420, 749, 764, 812 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 653, 830 |
| HpyF3I | CTNAG | 3 cut(s) | 27, 674, 777 |
| HpySE526I | ACGT | 2 cut(s) | 505, 717 |
| Hsp92II | CATG | 6 cut(s) | 216, 381, 453, 479, 617, 899 |
| HspAI | GCGC | 2 cut(s) | 144, 453 |
| Kpn2I | TCCGGA | 1 cut(s) | 640 |
| KspAI | GTTAAC | 1 cut(s) | 721 |
| Kzo9I | GATC | 2 cut(s) | 604, 637 |
| LmnI | GCTCC | 2 cut(s) | 403, 895 |
| Lsp1109I | GCAGC | 3 cut(s) | 182, 640, 846 |
| LweI | GCATC | 5 cut(s) | 100, 157, 394, 634, 773 |
| MaeI | CTAG | 5 cut(s) | 60, 77, 309, 437, 591 |
| MaeII | ACGT | 2 cut(s) | 505, 717 |
| MaeIII | GTNAC | 2 cut(s) | 713, 868 |
| MalI | GATC | 2 cut(s) | 606, 639 |
| MboI | GATC | 2 cut(s) | 604, 637 |
| MboII | GAAGA | 4 cut(s) | 539, 782, 916, 917 |
| MflI | RGATCY | 1 cut(s) | 637 |
| MluCI | AATT | 2 cut(s) | 739, 945 |
| MlyI | GAGTC | 2 cut(s) | 45, 76 |
| MmeI | TCCRAC | 2 cut(s) | 13, 277 |
| MnlI | CCTC | 7 cut(s) | 22, 37, 207, 570, 786, 903, 935 |
| Mph1103I | ATGCAT | 1 cut(s) | 218 |
| MroI | TCCGGA | 1 cut(s) | 640 |
| MseI | TTAA | 2 cut(s) | 720, 956 |
| MslI | CAYNNNNRTG | 2 cut(s) | 460, 708 |
| MspI | CCGG | 2 cut(s) | 114, 641 |
| MspR9I | CCNGG | 1 cut(s) | 938 |
| MvaI | CCWGG | 1 cut(s) | 938 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 653, 830 |
| NcoI | CCATGG | 1 cut(s) | 475 |
| NdeII | GATC | 2 cut(s) | 604, 637 |
| NlaIII | CATG | 6 cut(s) | 216, 381, 453, 479, 617, 899 |
| NlaIV | GGNNCC | 1 cut(s) | 481 |
| NsbI | TGCGCA | 1 cut(s) | 454 |
| NsiI | ATGCAT | 1 cut(s) | 218 |
| NspI | RCATGY | 2 cut(s) | 216, 617 |
| NspV | TTCGAA | 1 cut(s) | 661 |
| PaeI | GCATGC | 1 cut(s) | 216 |
| PfeI | GAWTC | 2 cut(s) | 149, 569 |
| PkrI | GCNGC | 3 cut(s) | 172, 655, 861 |
| PleI | GAGTC | 2 cut(s) | 44, 76 |
| PpsI | GAGTC | 2 cut(s) | 44, 76 |
| Psp1406I | AACGTT | 1 cut(s) | 717 |
| Psp6I | CCWGG | 1 cut(s) | 936 |
| PspGI | CCWGG | 1 cut(s) | 936 |
| PspN4I | GGNNCC | 1 cut(s) | 481 |
| PspPI | GGNCC | 2 cut(s) | 329, 480 |
| PstNI | CAGNNNCTG | 1 cut(s) | 26 |
| PsuI | RGATCY | 1 cut(s) | 637 |
| RsaI | GTAC | 2 cut(s) | 441, 628 |
| RsaNI | GTAC | 2 cut(s) | 440, 627 |
| RseI | CAYNNNNRTG | 2 cut(s) | 460, 708 |
| SaqAI | TTAA | 2 cut(s) | 720, 956 |
| SatI | GCNGC | 3 cut(s) | 171, 654, 860 |
| Sau3AI | GATC | 2 cut(s) | 604, 637 |
| Sau96I | GGNCC | 2 cut(s) | 329, 480 |
| SchI | GAGTC | 2 cut(s) | 45, 76 |
| ScrFI | CCNGG | 1 cut(s) | 938 |
| SfaNI | GCATC | 5 cut(s) | 100, 157, 394, 634, 773 |
| SfcI | CTRYAG | 3 cut(s) | 528, 648, 873 |
| SfuI | TTCGAA | 1 cut(s) | 661 |
| SinI | GGWCC | 1 cut(s) | 480 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 460, 708 |
| SphI | GCATGC | 1 cut(s) | 216 |
| Sse9I | AATT | 2 cut(s) | 739, 945 |
| SsiI | CCGC | 2 cut(s) | 608, 788 |
| SspMI | CTAG | 5 cut(s) | 60, 77, 309, 437, 591 |
| StyD4I | CCNGG | 1 cut(s) | 936 |
| StyI | CCWWGG | 2 cut(s) | 308, 475 |
| TaaI | ACNGT | 3 cut(s) | 487, 868, 961 |
| TaiI | ACGT | 2 cut(s) | 508, 720 |
| TaqI | TCGA | 2 cut(s) | 661, 976 |
| TasI | AATT | 2 cut(s) | 739, 945 |
| TatI | WGTACW | 2 cut(s) | 439, 626 |
| TfiI | GAWTC | 2 cut(s) | 149, 569 |
| Tru1I | TTAA | 2 cut(s) | 720, 956 |
| Tru9I | TTAA | 2 cut(s) | 720, 956 |
| TscAI | CASTG | 2 cut(s) | 46, 490 |
| TseI | GCWGC | 3 cut(s) | 170, 653, 859 |
| TspDTI | ATGAA | 7 cut(s) | 318, 337, 366, 438, 543, 582, 917 |
| TspRI | CASTG | 2 cut(s) | 46, 490 |
| VpaK11BI | GGWCC | 1 cut(s) | 480 |
| XapI | RAATTY | 1 cut(s) | 945 |
| XceI | RCATGY | 2 cut(s) | 216, 617 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 823 |
| XmaJI | CCTAGG | 1 cut(s) | 308 |
| XspI | CTAG | 5 cut(s) | 60, 77, 309, 437, 591 |
| Zsp2I | ATGCAT | 1 cut(s) | 218 |