Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 200 |
| Acc36I | ACCTGC | 2 cut(s) | 200, 1092 |
| Acc65I | GGTACC | 1 cut(s) | 158 |
| AccB1I | GGYRCC | 2 cut(s) | 127, 158 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 174 |
| AccBSI | CCGCTC | 2 cut(s) | 217, 1017 |
| AccII | CGCG | 1 cut(s) | 503 |
| AccIII | TCCGGA | 1 cut(s) | 1129 |
| AclI | AACGTT | 1 cut(s) | 1094 |
| AclWI | GGATC | 5 cut(s) | 89, 102, 462, 522, 811 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 3 cut(s) | 258, 545, 1040 |
| AcyI | GRCGYC | 1 cut(s) | 1225 |
| AfaI | GTAC | 2 cut(s) | 107, 160 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 12, 137, 174, 471, 974 |
| AgsI | TTSAA | 7 cut(s) | 154, 203, 230, 349, 545, 937, 1326 |
| AjnI | CCWGG | 2 cut(s) | 145, 530 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1148, 1180 |
| AluBI | AGCT | 6 cut(s) | 676, 860, 907, 1117, 1310, 1343 |
| AluI | AGCT | 6 cut(s) | 676, 860, 907, 1117, 1310, 1343 |
| Alw26I | GTCTC | 5 cut(s) | 303, 353, 791, 1204, 1422 |
| AlwI | GGATC | 5 cut(s) | 89, 102, 462, 522, 811 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| Ama87I | CYCGRG | 2 cut(s) | 11, 65 |
| Aor13HI | TCCGGA | 1 cut(s) | 1129 |
| AoxI | GGCC | 3 cut(s) | 3, 60, 190 |
| ApeKI | GCWGC | 4 cut(s) | 80, 83, 461, 698 |
| ApoI | RAATTY | 3 cut(s) | 258, 545, 1040 |
| Asp718I | GGTACC | 1 cut(s) | 158 |
| AspA2I | CCTAGG | 1 cut(s) | 1205 |
| AspS9I | GGNCC | 4 cut(s) | 61, 272, 922, 1264 |
| AsuHPI | GGTGA | 5 cut(s) | 224, 439, 922, 1194, 1446 |
| AsuII | TTCGAA | 1 cut(s) | 812 |
| AvaI | CYCGRG | 2 cut(s) | 11, 65 |
| AvaII | GGWCC | 3 cut(s) | 272, 922, 1264 |
| AvrII | CCTAGG | 1 cut(s) | 1205 |
| BamHI | GGATCC | 1 cut(s) | 94 |
| BanI | GGYRCC | 2 cut(s) | 127, 158 |
| BanII | GRGCYC | 1 cut(s) | 414 |
| BbsI | GAAGAC | 3 cut(s) | 374, 907, 944 |
| BbvCI | CCTCAGC | 1 cut(s) | 1353 |
| BbvI | GCAGC | 4 cut(s) | 67, 95, 473, 685 |
| BceAI | ACGGC | 1 cut(s) | 501 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 672, 706 |
| BciT130I | CCWGG | 2 cut(s) | 147, 532 |
| BclI | TGATCA | 2 cut(s) | 657, 946 |
| BcoDI | GTCTC | 5 cut(s) | 303, 353, 791, 1204, 1422 |
| BfaI | CTAG | 4 cut(s) | 434, 855, 1086, 1206 |
| BfmI | CTRYAG | 1 cut(s) | 81 |
| BfuAI | ACCTGC | 2 cut(s) | 200, 1092 |
| BisI | GCNGC | 6 cut(s) | 38, 81, 84, 462, 699, 1401 |
| BlnI | CCTAGG | 1 cut(s) | 1205 |
| BlsI | GCNGC | 6 cut(s) | 39, 82, 85, 463, 700, 1402 |
| Bme1390I | CCNGG | 2 cut(s) | 147, 532 |
| Bme18I | GGWCC | 3 cut(s) | 272, 922, 1264 |
| BmeT110I | CYCGRG | 2 cut(s) | 11, 65 |
| BmgT120I | GGNCC | 4 cut(s) | 61, 272, 922, 1264 |
| BmiI | GGNNCC | 6 cut(s) | 96, 129, 160, 273, 918, 1404 |
| BmrFI | CCNGG | 2 cut(s) | 147, 532 |
| BmrI | ACTGGG | 2 cut(s) | 852, 1374 |
| BmsI | GCATC | 8 cut(s) | 38, 61, 187, 196, 285, 622, 741, 1383 |
| BmuI | ACTGGG | 2 cut(s) | 852, 1374 |
| BpiI | GAAGAC | 3 cut(s) | 374, 907, 944 |
| BpmI | CTGGAG | 1 cut(s) | 882 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1353 |
| Bpu14I | TTCGAA | 1 cut(s) | 812 |
| BsaHI | GRCGYC | 1 cut(s) | 1225 |
| BsaI | GGTCTC | 1 cut(s) | 1204 |
| BsaJI | CCNNGG | 4 cut(s) | 64, 275, 1164, 1205 |
| BsaWI | WCCGGW | 5 cut(s) | 331, 553, 565, 1129, 1420 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 698, 728, 1380, 1410 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 12, 137, 174, 471, 974 |
| Bse118I | RCCGGY | 1 cut(s) | 919 |
| Bse1I | ACTGG | 6 cut(s) | 805, 847, 1001, 1200, 1369, 1464 |
| Bse3DI | GCAATG | 1 cut(s) | 1347 |
| BseAI | TCCGGA | 1 cut(s) | 1129 |
| BseBI | CCWGG | 2 cut(s) | 147, 532 |
| BseDI | CCNNGG | 4 cut(s) | 64, 275, 1164, 1205 |
| BseGI | GGATG | 4 cut(s) | 76, 456, 976, 1399 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 12, 137, 174, 471, 974 |
| BseMI | GCAATG | 1 cut(s) | 1347 |
| BseMII | CTCAG | 3 cut(s) | 196, 1134, 1344 |
| BseNI | ACTGG | 6 cut(s) | 805, 847, 1001, 1200, 1369, 1464 |
| BseRI | GAGGAG | 1 cut(s) | 686 |
| BseXI | GCAGC | 4 cut(s) | 67, 95, 473, 685 |
| Bsh1236I | CGCG | 1 cut(s) | 503 |
| Bsh1285I | CGRYCG | 1 cut(s) | 566 |
| BshFI | GGCC | 3 cut(s) | 5, 62, 192 |
| BshNI | GGYRCC | 2 cut(s) | 127, 158 |
| BsiEI | CGRYCG | 1 cut(s) | 566 |
| BsiHKCI | CYCGRG | 2 cut(s) | 11, 65 |
| BsiSI | CCGG | 8 cut(s) | 6, 332, 554, 566, 920, 968, 1130, 1421 |
| BslFI | GGGAC | 2 cut(s) | 129, 844 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 12, 137, 174, 471, 974 |
| BsmAI | GTCTC | 5 cut(s) | 303, 353, 791, 1204, 1422 |
| BsmFI | GGGAC | 2 cut(s) | 129, 844 |
| BsnI | GGCC | 3 cut(s) | 5, 62, 192 |
| Bso31I | GGTCTC | 1 cut(s) | 1204 |
| BsoBI | CYCGRG | 2 cut(s) | 11, 65 |
| Bsp119I | TTCGAA | 1 cut(s) | 812 |
| Bsp1286I | GDGCHC | 1 cut(s) | 414 |
| Bsp13I | TCCGGA | 1 cut(s) | 1129 |
| Bsp143I | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| BspANI | GGCC | 3 cut(s) | 5, 62, 192 |
| BspCNI | CTCAG | 3 cut(s) | 195, 1133, 1345 |
| BspEI | TCCGGA | 1 cut(s) | 1129 |
| BspFNI | CGCG | 1 cut(s) | 503 |
| BspHI | TCATGA | 1 cut(s) | 943 |
| BspLI | GGNNCC | 6 cut(s) | 96, 129, 160, 273, 918, 1404 |
| BspMAI | CTGCAG | 1 cut(s) | 85 |
| BspMI | ACCTGC | 2 cut(s) | 200, 1092 |
| BspPI | GGATC | 5 cut(s) | 89, 102, 462, 522, 811 |
| BspQI | GCTCTTC | 1 cut(s) | 477 |
| BspT104I | TTCGAA | 1 cut(s) | 812 |
| BspT107I | GGYRCC | 2 cut(s) | 127, 158 |
| BspTNI | GGTCTC | 1 cut(s) | 1204 |
| BsrBI | CCGCTC | 2 cut(s) | 217, 1017 |
| BsrDI | GCAATG | 1 cut(s) | 1347 |
| BsrFI | RCCGGY | 1 cut(s) | 919 |
| BsrI | ACTGG | 6 cut(s) | 805, 847, 1001, 1200, 1369, 1464 |
| BssAI | RCCGGY | 1 cut(s) | 919 |
| BssECI | CCNNGG | 4 cut(s) | 64, 275, 1164, 1205 |
| BssMI | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| BssNI | GRCGYC | 1 cut(s) | 1225 |
| BssT1I | CCWWGG | 3 cut(s) | 275, 1164, 1205 |
| Bst2UI | CCWGG | 2 cut(s) | 147, 532 |
| Bst4CI | ACNGT | 2 cut(s) | 724, 933 |
| Bst6I | CTCTTC | 4 cut(s) | 477, 1051, 1266, 1292 |
| BstACI | GRCGYC | 1 cut(s) | 1225 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 80 |
| BstBI | TTCGAA | 1 cut(s) | 812 |
| BstC8I | GCNNGC | 3 cut(s) | 42, 139, 1056 |
| BstDEI | CTNAG | 3 cut(s) | 182, 1120, 1353 |
| BstF5I | GGATG | 4 cut(s) | 76, 456, 976, 1399 |
| BstFNI | CGCG | 1 cut(s) | 503 |
| BstKTI | GATC | 8 cut(s) | 97, 188, 457, 530, 660, 784, 806, 949 |
| BstMAI | GTCTC | 5 cut(s) | 303, 353, 791, 1204, 1422 |
| BstMBI | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| BstMCI | CGRYCG | 1 cut(s) | 566 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 1349 |
| BstNI | CCWGG | 2 cut(s) | 147, 532 |
| BstSCI | CCNGG | 2 cut(s) | 145, 530 |
| BstSFI | CTRYAG | 1 cut(s) | 81 |
| BstUI | CGCG | 1 cut(s) | 503 |
| BstV1I | GCAGC | 4 cut(s) | 67, 95, 473, 685 |
| BstV2I | GAAGAC | 3 cut(s) | 374, 907, 944 |
| BstX2I | RGATCY | 2 cut(s) | 94, 454 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 895 |
| BstYI | RGATCY | 2 cut(s) | 94, 454 |
| BsuRI | GGCC | 3 cut(s) | 5, 62, 192 |
| BtgZI | GCGATG | 3 cut(s) | 650, 716, 1073 |
| BtsCI | GGATG | 4 cut(s) | 76, 456, 976, 1399 |
| BveI | ACCTGC | 2 cut(s) | 200, 1092 |
| Cac8I | GCNNGC | 3 cut(s) | 42, 139, 1056 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CciI | TCATGA | 1 cut(s) | 943 |
| Cfr10I | RCCGGY | 1 cut(s) | 919 |
| Cfr13I | GGNCC | 4 cut(s) | 61, 272, 922, 1264 |
| CseI | GACGC | 2 cut(s) | 439, 1214 |
| Csp6I | GTAC | 2 cut(s) | 106, 159 |
| CviQI | GTAC | 2 cut(s) | 106, 159 |
| DdeI | CTNAG | 3 cut(s) | 182, 1120, 1353 |
| DpnI | GATC | 8 cut(s) | 96, 187, 456, 529, 659, 783, 805, 948 |
| DpnII | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 4 cut(s) | 477, 1051, 1266, 1292 |
| EarI | CTCTTC | 4 cut(s) | 477, 1051, 1266, 1292 |
| EciI | GGCGGA | 2 cut(s) | 59, 954 |
| Eco130I | CCWWGG | 3 cut(s) | 275, 1164, 1205 |
| Eco147I | AGGCCT | 1 cut(s) | 192 |
| Eco24I | GRGCYC | 1 cut(s) | 414 |
| Eco31I | GGTCTC | 1 cut(s) | 1204 |
| Eco47I | GGWCC | 3 cut(s) | 272, 922, 1264 |
| Eco88I | CYCGRG | 2 cut(s) | 11, 65 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| EcoRI | GAATTC | 1 cut(s) | 1040 |
| EcoRII | CCWGG | 2 cut(s) | 145, 530 |
| EcoT14I | CCWWGG | 3 cut(s) | 275, 1164, 1205 |
| EcoT38I | GRGCYC | 1 cut(s) | 414 |
| ErhI | CCWWGG | 3 cut(s) | 275, 1164, 1205 |
| FaqI | GGGAC | 2 cut(s) | 129, 844 |
| FauI | CCCGC | 3 cut(s) | 130, 369, 1010 |
| FbaI | TGATCA | 2 cut(s) | 657, 946 |
| Fnu4HI | GCNGC | 6 cut(s) | 38, 81, 84, 462, 699, 1401 |
| FokI | GGATG | 4 cut(s) | 83, 463, 983, 1406 |
| FriOI | GRGCYC | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 6 cut(s) | 38, 81, 84, 462, 699, 1401 |
| FspBI | CTAG | 4 cut(s) | 434, 855, 1086, 1206 |
| GluI | GCNGC | 6 cut(s) | 38, 81, 84, 462, 699, 1401 |
| GsuI | CTGGAG | 1 cut(s) | 882 |
| HaeIII | GGCC | 3 cut(s) | 5, 62, 192 |
| HapII | CCGG | 8 cut(s) | 6, 332, 554, 566, 920, 968, 1130, 1421 |
| HgaI | GACGC | 2 cut(s) | 439, 1214 |
| Hin1I | GRCGYC | 1 cut(s) | 1225 |
| HincII | GTYRAC | 2 cut(s) | 573, 1092 |
| HindII | GTYRAC | 2 cut(s) | 573, 1092 |
| HindIII | AAGCTT | 1 cut(s) | 1308 |
| HpaI | GTTAAC | 1 cut(s) | 573 |
| HpaII | CCGG | 8 cut(s) | 6, 332, 554, 566, 920, 968, 1130, 1421 |
| HphI | GGTGA | 5 cut(s) | 224, 439, 922, 1194, 1446 |
| Hpy166II | GTNNAC | 2 cut(s) | 573, 1092 |
| Hpy188I | TCNGA | 3 cut(s) | 185, 522, 1230 |
| Hpy188III | TCNNGA | 7 cut(s) | 13, 92, 203, 608, 765, 944, 1130 |
| Hpy8I | GTNNAC | 2 cut(s) | 573, 1092 |
| Hpy99I | CGWCG | 2 cut(s) | 522, 1141 |
| HpyAV | CCTTC | 5 cut(s) | 469, 583, 808, 1225, 1467 |
| HpyCH4III | ACNGT | 2 cut(s) | 724, 933 |
| HpyCH4IV | ACGT | 3 cut(s) | 1094, 1160, 1444 |
| HpyCH4V | TGCA | 9 cut(s) | 74, 83, 209, 265, 754, 1054, 1174, 1381, 1427 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 1349 |
| HpyF3I | CTNAG | 3 cut(s) | 182, 1120, 1353 |
| HpySE526I | ACGT | 3 cut(s) | 1094, 1160, 1444 |
| Hsp92I | GRCGYC | 1 cut(s) | 1225 |
| Kpn2I | TCCGGA | 1 cut(s) | 1129 |
| KpnI | GGTACC | 1 cut(s) | 162 |
| Ksp22I | TGATCA | 2 cut(s) | 657, 946 |
| KspAI | GTTAAC | 1 cut(s) | 573 |
| Kzo9I | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| LguI | GCTCTTC | 1 cut(s) | 477 |
| LmnI | GCTCC | 4 cut(s) | 673, 916, 1014, 1408 |
| Lsp1109I | GCAGC | 4 cut(s) | 67, 95, 473, 685 |
| LweI | GCATC | 8 cut(s) | 38, 61, 187, 196, 285, 622, 741, 1383 |
| MaeI | CTAG | 4 cut(s) | 434, 855, 1086, 1206 |
| MaeII | ACGT | 3 cut(s) | 1094, 1160, 1444 |
| MaeIII | GTNAC | 2 cut(s) | 427, 1360 |
| MalI | GATC | 8 cut(s) | 96, 187, 456, 529, 659, 783, 805, 948 |
| MbiI | CCGCTC | 2 cut(s) | 217, 1017 |
| MboI | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| MfeI | CAATTG | 1 cut(s) | 1407 |
| MflI | RGATCY | 2 cut(s) | 94, 454 |
| MhlI | GDGCHC | 1 cut(s) | 414 |
| MluCI | AATT | 6 cut(s) | 230, 258, 545, 1040, 1407, 1473 |
| MlyI | GAGTC | 9 cut(s) | 3, 41, 46, 251, 770, 934, 1006, 1127, 1424 |
| MmeI | TCCRAC | 3 cut(s) | 500, 1122, 1129 |
| MroI | TCCGGA | 1 cut(s) | 1129 |
| MseI | TTAA | 5 cut(s) | 572, 594, 1251, 1472, 1477 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1182 |
| MspA1I | CMGCKG | 1 cut(s) | 907 |
| MspI | CCGG | 8 cut(s) | 6, 332, 554, 566, 920, 968, 1130, 1421 |
| MspR9I | CCNGG | 2 cut(s) | 147, 532 |
| MunI | CAATTG | 1 cut(s) | 1407 |
| MvaI | CCWGG | 2 cut(s) | 147, 532 |
| MvnI | CGCG | 1 cut(s) | 503 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 80, 134, 1349 |
| NdeII | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| NlaIV | GGNNCC | 6 cut(s) | 96, 129, 160, 273, 918, 1404 |
| NmuCI | GTSAC | 2 cut(s) | 427, 1360 |
| NspV | TTCGAA | 1 cut(s) | 812 |
| PagI | TCATGA | 1 cut(s) | 943 |
| PaqCI | CACCTGC | 1 cut(s) | 200 |
| PceI | AGGCCT | 1 cut(s) | 192 |
| PciSI | GCTCTTC | 1 cut(s) | 477 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 698 |
| PfeI | GAWTC | 5 cut(s) | 20, 523, 689, 1282, 1322 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 174 |
| PfoI | TCCNGGA | 1 cut(s) | 530 |
| PkrI | GCNGC | 6 cut(s) | 39, 82, 85, 463, 700, 1402 |
| PleI | GAGTC | 9 cut(s) | 3, 41, 46, 250, 769, 934, 1005, 1127, 1423 |
| PpsI | GAGTC | 9 cut(s) | 3, 41, 46, 250, 769, 934, 1005, 1127, 1423 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| Psp1406I | AACGTT | 1 cut(s) | 1094 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| Psp6I | CCWGG | 2 cut(s) | 145, 530 |
| PspGI | CCWGG | 2 cut(s) | 145, 530 |
| PspN4I | GGNNCC | 6 cut(s) | 96, 129, 160, 273, 918, 1404 |
| PspPI | GGNCC | 4 cut(s) | 61, 272, 922, 1264 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PstI | CTGCAG | 1 cut(s) | 85 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| PsuI | RGATCY | 2 cut(s) | 94, 454 |
| PvuII | CAGCTG | 1 cut(s) | 907 |
| RsaI | GTAC | 2 cut(s) | 107, 160 |
| RsaNI | GTAC | 2 cut(s) | 106, 159 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1182 |
| SapI | GCTCTTC | 1 cut(s) | 477 |
| SaqAI | TTAA | 5 cut(s) | 572, 594, 1251, 1472, 1477 |
| SatI | GCNGC | 6 cut(s) | 38, 81, 84, 462, 699, 1401 |
| Sau3AI | GATC | 8 cut(s) | 94, 185, 454, 527, 657, 781, 803, 946 |
| Sau96I | GGNCC | 4 cut(s) | 61, 272, 922, 1264 |
| SchI | GAGTC | 9 cut(s) | 3, 41, 46, 251, 770, 934, 1006, 1127, 1424 |
| ScrFI | CCNGG | 2 cut(s) | 147, 532 |
| SduI | GDGCHC | 1 cut(s) | 414 |
| SfaNI | GCATC | 8 cut(s) | 38, 61, 187, 196, 285, 622, 741, 1383 |
| SfcI | CTRYAG | 1 cut(s) | 81 |
| SfuI | TTCGAA | 1 cut(s) | 812 |
| SinI | GGWCC | 3 cut(s) | 272, 922, 1264 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1182 |
| Sse9I | AATT | 6 cut(s) | 230, 258, 545, 1040, 1407, 1473 |
| SseBI | AGGCCT | 1 cut(s) | 192 |
| SspI | AATATT | 1 cut(s) | 1030 |
| SspMI | CTAG | 4 cut(s) | 434, 855, 1086, 1206 |
| StuI | AGGCCT | 1 cut(s) | 192 |
| StyD4I | CCNGG | 2 cut(s) | 145, 530 |
| StyI | CCWWGG | 3 cut(s) | 275, 1164, 1205 |
| TaaI | ACNGT | 2 cut(s) | 724, 933 |
| TaiI | ACGT | 3 cut(s) | 1097, 1163, 1447 |
| TaqI | TCGA | 5 cut(s) | 50, 256, 526, 812, 980 |
| TasI | AATT | 6 cut(s) | 230, 258, 545, 1040, 1407, 1473 |
| TauI | GCSGC | 2 cut(s) | 40, 1403 |
| TfiI | GAWTC | 5 cut(s) | 20, 523, 689, 1282, 1322 |
| Tru1I | TTAA | 5 cut(s) | 572, 594, 1251, 1472, 1477 |
| Tru9I | TTAA | 5 cut(s) | 572, 594, 1251, 1472, 1477 |
| TseFI | GTSAC | 2 cut(s) | 427, 1360 |
| TseI | GCWGC | 4 cut(s) | 80, 83, 461, 698 |
| Tsp45I | GTSAC | 2 cut(s) | 427, 1360 |
| TspDTI | ATGAA | 4 cut(s) | 211, 568, 949, 1022 |
| TspGWI | ACGGA | 1 cut(s) | 853 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 174 |
| VpaK11BI | GGWCC | 3 cut(s) | 272, 922, 1264 |
| XapI | RAATTY | 3 cut(s) | 258, 545, 1040 |
| XmaJI | CCTAGG | 1 cut(s) | 1205 |
| XspI | CTAG | 4 cut(s) | 434, 855, 1086, 1206 |