Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 516 |
| AccB1I | GGYRCC | 1 cut(s) | 325 |
| AclWI | GGATC | 7 cut(s) | 16, 83, 196, 202, 250, 263, 445 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 151, 460 |
| AgsI | TTSAA | 1 cut(s) | 350 |
| AjnI | CCWGG | 2 cut(s) | 195, 413 |
| AluBI | AGCT | 1 cut(s) | 375 |
| AluI | AGCT | 1 cut(s) | 375 |
| Alw26I | GTCTC | 1 cut(s) | 392 |
| AlwI | GGATC | 7 cut(s) | 16, 83, 196, 202, 250, 263, 445 |
| Ama87I | CYCGRG | 1 cut(s) | 98 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 1 cut(s) | 170 |
| AspLEI | GCGC | 1 cut(s) | 175 |
| AspS9I | GGNCC | 2 cut(s) | 35, 142 |
| AsuHPI | GGTGA | 1 cut(s) | 407 |
| AsuII | TTCGAA | 1 cut(s) | 160 |
| AvaI | CYCGRG | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 35 |
| BamHI | GGATCC | 1 cut(s) | 255 |
| BanI | GGYRCC | 1 cut(s) | 325 |
| BbsI | GAAGAC | 1 cut(s) | 149 |
| BbvI | GCAGC | 1 cut(s) | 157 |
| BccI | CCATC | 1 cut(s) | 534 |
| BceAI | ACGGC | 1 cut(s) | 477 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 46, 80, 206, 240 |
| BciT130I | CCWGG | 2 cut(s) | 197, 415 |
| BcoDI | GTCTC | 1 cut(s) | 392 |
| BfaI | CTAG | 1 cut(s) | 68 |
| BfuAI | ACCTGC | 1 cut(s) | 516 |
| BisI | GCNGC | 1 cut(s) | 171 |
| BlsI | GCNGC | 1 cut(s) | 172 |
| Bme1390I | CCNGG | 2 cut(s) | 197, 415 |
| Bme18I | GGWCC | 1 cut(s) | 35 |
| BmeT110I | CYCGRG | 1 cut(s) | 98 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 142 |
| BmiI | GGNNCC | 3 cut(s) | 105, 257, 327 |
| BmrFI | CCNGG | 2 cut(s) | 197, 415 |
| BmsI | GCATC | 5 cut(s) | 121, 288, 400, 511, 512 |
| BpiI | GAAGAC | 1 cut(s) | 149 |
| Bpu14I | TTCGAA | 1 cut(s) | 160 |
| Bsa29I | ATCGAT | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 4 cut(s) | 38, 195, 196, 459 |
| BsaWI | WCCGGW | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 151, 460 |
| BseBI | CCWGG | 2 cut(s) | 197, 415 |
| BseCI | ATCGAT | 1 cut(s) | 87 |
| BseDI | CCNNGG | 4 cut(s) | 38, 195, 196, 459 |
| BseGI | GGATG | 2 cut(s) | 303, 410 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 151, 460 |
| BseMII | CTCAG | 2 cut(s) | 461, 501 |
| BseXI | GCAGC | 1 cut(s) | 157 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BshNI | GGYRCC | 1 cut(s) | 325 |
| BshVI | ATCGAT | 1 cut(s) | 87 |
| BsiHKCI | CYCGRG | 1 cut(s) | 98 |
| BsiSI | CCGG | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 151, 460 |
| BsmAI | GTCTC | 1 cut(s) | 392 |
| BsmI | GAATGC | 1 cut(s) | 229 |
| BsnI | GGCC | 1 cut(s) | 144 |
| BsoBI | CYCGRG | 1 cut(s) | 98 |
| Bsp119I | TTCGAA | 1 cut(s) | 160 |
| Bsp143I | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 2 cut(s) | 460, 502 |
| BspDI | ATCGAT | 1 cut(s) | 87 |
| BspLI | GGNNCC | 3 cut(s) | 105, 257, 327 |
| BspMI | ACCTGC | 1 cut(s) | 516 |
| BspPI | GGATC | 7 cut(s) | 16, 83, 196, 202, 250, 263, 445 |
| BspT104I | TTCGAA | 1 cut(s) | 160 |
| BspT107I | GGYRCC | 1 cut(s) | 325 |
| BssECI | CCNNGG | 4 cut(s) | 38, 195, 196, 459 |
| BssMI | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| BssT1I | CCWWGG | 1 cut(s) | 38 |
| Bst2UI | CCWGG | 2 cut(s) | 197, 415 |
| Bst4CI | ACNGT | 3 cut(s) | 83, 322, 336 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 131 |
| BstBI | TTCGAA | 1 cut(s) | 160 |
| BstDEI | CTNAG | 4 cut(s) | 287, 423, 447, 510 |
| BstDSI | CCRYGG | 1 cut(s) | 459 |
| BstF5I | GGATG | 2 cut(s) | 303, 410 |
| BstHHI | GCGC | 1 cut(s) | 175 |
| BstKTI | GATC | 7 cut(s) | 24, 91, 191, 210, 258, 441, 453 |
| BstMAI | GTCTC | 1 cut(s) | 392 |
| BstMBI | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 131 |
| BstNI | CCWGG | 2 cut(s) | 197, 415 |
| BstSCI | CCNGG | 2 cut(s) | 195, 413 |
| BstV1I | GCAGC | 1 cut(s) | 157 |
| BstV2I | GAAGAC | 1 cut(s) | 149 |
| BstX2I | RGATCY | 3 cut(s) | 21, 255, 450 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 466 |
| BstYI | RGATCY | 3 cut(s) | 21, 255, 450 |
| Bsu15I | ATCGAT | 1 cut(s) | 87 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| BsuTUI | ATCGAT | 1 cut(s) | 87 |
| BtgI | CCRYGG | 1 cut(s) | 459 |
| BtsCI | GGATG | 2 cut(s) | 303, 410 |
| BtsI | GCAGTG | 1 cut(s) | 107 |
| BtsIMutI | CAGTG | 2 cut(s) | 107, 314 |
| BveI | ACCTGC | 1 cut(s) | 516 |
| CfoI | GCGC | 1 cut(s) | 175 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 142 |
| ClaI | ATCGAT | 1 cut(s) | 87 |
| CseI | GACGC | 1 cut(s) | 251 |
| CviAII | CATG | 4 cut(s) | 29, 126, 392, 442 |
| CviJI | RGCY | 9 cut(s) | 8, 144, 170, 194, 375, 381, 446, 458, 464 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 144, 170, 194, 375, 381, 446, 458, 464 |
| DdeI | CTNAG | 4 cut(s) | 287, 423, 447, 510 |
| DpnI | GATC | 7 cut(s) | 23, 90, 190, 209, 257, 440, 452 |
| DpnII | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| Eco130I | CCWWGG | 1 cut(s) | 38 |
| Eco47I | GGWCC | 1 cut(s) | 35 |
| Eco88I | CYCGRG | 1 cut(s) | 98 |
| EcoO109I | RGGNCCY | 2 cut(s) | 35, 142 |
| EcoRII | CCWGG | 2 cut(s) | 195, 413 |
| EcoT14I | CCWWGG | 1 cut(s) | 38 |
| EcoT22I | ATGCAT | 1 cut(s) | 393 |
| ErhI | CCWWGG | 1 cut(s) | 38 |
| FaeI | CATG | 4 cut(s) | 32, 129, 395, 445 |
| FatI | CATG | 4 cut(s) | 28, 125, 391, 441 |
| Fnu4HI | GCNGC | 1 cut(s) | 171 |
| FokI | GGATG | 2 cut(s) | 310, 417 |
| Fsp4HI | GCNGC | 1 cut(s) | 171 |
| FspBI | CTAG | 1 cut(s) | 68 |
| GlaI | GCGC | 1 cut(s) | 174 |
| GluI | GCNGC | 1 cut(s) | 171 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| HapII | CCGG | 1 cut(s) | 149 |
| HgaI | GACGC | 1 cut(s) | 251 |
| HhaI | GCGC | 1 cut(s) | 175 |
| Hin1II | CATG | 4 cut(s) | 32, 129, 395, 445 |
| Hin6I | GCGC | 1 cut(s) | 173 |
| HinP1I | GCGC | 1 cut(s) | 173 |
| HincII | GTYRAC | 1 cut(s) | 420 |
| HindII | GTYRAC | 1 cut(s) | 420 |
| HpaII | CCGG | 1 cut(s) | 149 |
| HphI | GGTGA | 1 cut(s) | 407 |
| Hpy166II | GTNNAC | 1 cut(s) | 420 |
| Hpy188I | TCNGA | 6 cut(s) | 260, 359, 372, 450, 507, 533 |
| Hpy8I | GTNNAC | 1 cut(s) | 420 |
| Hpy99I | CGWCG | 1 cut(s) | 282 |
| HpyAV | CCTTC | 2 cut(s) | 155, 232 |
| HpyCH4III | ACNGT | 3 cut(s) | 83, 322, 336 |
| HpyCH4IV | ACGT | 1 cut(s) | 496 |
| HpyCH4V | TGCA | 4 cut(s) | 112, 134, 391, 525 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 131 |
| HpyF3I | CTNAG | 4 cut(s) | 287, 423, 447, 510 |
| HpySE526I | ACGT | 1 cut(s) | 496 |
| Hsp92II | CATG | 4 cut(s) | 32, 129, 395, 445 |
| HspAI | GCGC | 1 cut(s) | 173 |
| Kzo9I | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| Lsp1109I | GCAGC | 1 cut(s) | 157 |
| LweI | GCATC | 5 cut(s) | 121, 288, 400, 511, 512 |
| MaeI | CTAG | 1 cut(s) | 68 |
| MaeII | ACGT | 1 cut(s) | 496 |
| MalI | GATC | 7 cut(s) | 23, 90, 190, 209, 257, 440, 452 |
| MboI | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| MboII | GAAGA | 1 cut(s) | 149 |
| MflI | RGATCY | 3 cut(s) | 21, 255, 450 |
| MmeI | TCCRAC | 1 cut(s) | 451 |
| MnlI | CCTC | 6 cut(s) | 26, 65, 94, 353, 505, 527 |
| Mph1103I | ATGCAT | 1 cut(s) | 393 |
| MseI | TTAA | 2 cut(s) | 138, 342 |
| MslI | CAYNNNNRTG | 1 cut(s) | 464 |
| MspI | CCGG | 1 cut(s) | 149 |
| MspR9I | CCNGG | 2 cut(s) | 197, 415 |
| Mva1269I | GAATGC | 1 cut(s) | 229 |
| MvaI | CCWGG | 2 cut(s) | 197, 415 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 131 |
| NdeII | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| NlaIII | CATG | 4 cut(s) | 32, 129, 395, 445 |
| NlaIV | GGNNCC | 3 cut(s) | 105, 257, 327 |
| NsiI | ATGCAT | 1 cut(s) | 393 |
| NspV | TTCGAA | 1 cut(s) | 160 |
| PaeR7I | CTCGAG | 1 cut(s) | 98 |
| PasI | CCCWGGG | 1 cut(s) | 196 |
| PctI | GAATGC | 1 cut(s) | 229 |
| PkrI | GCNGC | 1 cut(s) | 172 |
| PpuMI | RGGWCCY | 1 cut(s) | 35 |
| Psp5II | RGGWCCY | 1 cut(s) | 35 |
| Psp6I | CCWGG | 2 cut(s) | 195, 413 |
| PspGI | CCWGG | 2 cut(s) | 195, 413 |
| PspN4I | GGNNCC | 3 cut(s) | 105, 257, 327 |
| PspPI | GGNCC | 2 cut(s) | 35, 142 |
| PspPPI | RGGWCCY | 1 cut(s) | 35 |
| PspXI | VCTCGAGB | 1 cut(s) | 98 |
| PsuI | RGATCY | 3 cut(s) | 21, 255, 450 |
| RseI | CAYNNNNRTG | 1 cut(s) | 464 |
| SaqAI | TTAA | 2 cut(s) | 138, 342 |
| SatI | GCNGC | 1 cut(s) | 171 |
| Sau3AI | GATC | 7 cut(s) | 21, 88, 188, 207, 255, 438, 450 |
| Sau96I | GGNCC | 2 cut(s) | 35, 142 |
| ScrFI | CCNGG | 2 cut(s) | 197, 415 |
| SetI | ASST | 8 cut(s) | 40, 76, 105, 357, 364, 377, 499, 530 |
| SfaNI | GCATC | 5 cut(s) | 121, 288, 400, 511, 512 |
| Sfr274I | CTCGAG | 1 cut(s) | 98 |
| SfuI | TTCGAA | 1 cut(s) | 160 |
| SinI | GGWCC | 1 cut(s) | 35 |
| SlaI | CTCGAG | 1 cut(s) | 98 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 464 |
| SmlI | CTYRAG | 1 cut(s) | 98 |
| SmoI | CTYRAG | 1 cut(s) | 98 |
| SspMI | CTAG | 1 cut(s) | 68 |
| StyD4I | CCNGG | 2 cut(s) | 195, 413 |
| StyI | CCWWGG | 1 cut(s) | 38 |
| TaaI | ACNGT | 3 cut(s) | 83, 322, 336 |
| TaiI | ACGT | 1 cut(s) | 499 |
| TaqI | TCGA | 6 cut(s) | 87, 99, 160, 216, 277, 306 |
| Tru1I | TTAA | 2 cut(s) | 138, 342 |
| Tru9I | TTAA | 2 cut(s) | 138, 342 |
| TscAI | CASTG | 2 cut(s) | 114, 321 |
| TseI | GCWGC | 1 cut(s) | 170 |
| TspGWI | ACGGA | 1 cut(s) | 200 |
| TspRI | CASTG | 2 cut(s) | 114, 321 |
| VpaK11BI | GGWCC | 1 cut(s) | 35 |
| XhoI | CTCGAG | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 68 |
| Zsp2I | ATGCAT | 1 cut(s) | 393 |