Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 208 |
| AciI | CCGC | 1 cut(s) | 81 |
| AclWI | GGATC | 2 cut(s) | 24, 266 |
| AcoI | YGGCCR | 1 cut(s) | 115 |
| AfaI | GTAC | 3 cut(s) | 107, 249, 444 |
| AfeI | AGCGCT | 2 cut(s) | 12, 218 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 124, 208 |
| AgsI | TTSAA | 2 cut(s) | 92, 154 |
| AjnI | CCWGG | 2 cut(s) | 201, 362 |
| AlwI | GGATC | 2 cut(s) | 24, 266 |
| Aor51HI | AGCGCT | 2 cut(s) | 12, 218 |
| AoxI | GGCC | 2 cut(s) | 115, 243 |
| ApeKI | GCWGC | 2 cut(s) | 71, 83 |
| AspLEI | GCGC | 2 cut(s) | 13, 219 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuC2I | CCSGG | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 1 cut(s) | 11 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BaeGI | GKGCMC | 1 cut(s) | 161 |
| BanII | GRGCYC | 2 cut(s) | 384, 428 |
| BbvI | GCAGC | 2 cut(s) | 70, 83 |
| BccI | CCATC | 2 cut(s) | 311, 349 |
| BceAI | ACGGC | 2 cut(s) | 102, 230 |
| BciT130I | CCWGG | 2 cut(s) | 203, 364 |
| BclI | TGATCA | 2 cut(s) | 97, 454 |
| BcnI | CCSGG | 1 cut(s) | 147 |
| BfaI | CTAG | 1 cut(s) | 434 |
| BfoI | RGCGCY | 2 cut(s) | 14, 220 |
| BisI | GCNGC | 3 cut(s) | 72, 81, 84 |
| BlsI | GCNGC | 3 cut(s) | 73, 82, 85 |
| Bme1390I | CCNGG | 3 cut(s) | 147, 203, 364 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmiI | GGNNCC | 2 cut(s) | 129, 383 |
| BmrFI | CCNGG | 3 cut(s) | 147, 203, 364 |
| BmrI | ACTGGG | 1 cut(s) | 380 |
| BmsI | GCATC | 1 cut(s) | 187 |
| BmuI | ACTGGG | 1 cut(s) | 380 |
| BpuMI | CCSGG | 1 cut(s) | 147 |
| BsaAI | YACGTR | 1 cut(s) | 251 |
| BsaJI | CCNNGG | 2 cut(s) | 275, 363 |
| BsaWI | WCCGGW | 1 cut(s) | 255 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 124, 208 |
| Bse1I | ACTGG | 3 cut(s) | 129, 229, 386 |
| BseBI | CCWGG | 2 cut(s) | 203, 364 |
| BseDI | CCNNGG | 2 cut(s) | 275, 363 |
| BseGI | GGATG | 1 cut(s) | 360 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 124, 208 |
| BseMII | CTCAG | 4 cut(s) | 57, 196, 314, 386 |
| BseNI | ACTGG | 3 cut(s) | 129, 229, 386 |
| BseSI | GKGCMC | 1 cut(s) | 161 |
| BseXI | GCAGC | 2 cut(s) | 70, 83 |
| BshFI | GGCC | 2 cut(s) | 117, 245 |
| BsiSI | CCGG | 2 cut(s) | 146, 256 |
| BsiWI | CGTACG | 1 cut(s) | 247 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 124, 208 |
| BsmI | GAATGC | 1 cut(s) | 466 |
| BsnI | GGCC | 2 cut(s) | 117, 245 |
| Bsp1286I | GDGCHC | 3 cut(s) | 161, 384, 428 |
| Bsp143I | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| BspACI | CCGC | 1 cut(s) | 81 |
| BspANI | GGCC | 2 cut(s) | 117, 245 |
| BspCNI | CTCAG | 4 cut(s) | 56, 195, 315, 387 |
| BspLI | GGNNCC | 2 cut(s) | 129, 383 |
| BspPI | GGATC | 2 cut(s) | 24, 266 |
| BsrI | ACTGG | 3 cut(s) | 129, 229, 386 |
| BssECI | CCNNGG | 2 cut(s) | 275, 363 |
| BssMI | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| Bst2UI | CCWGG | 2 cut(s) | 203, 364 |
| Bst4CI | ACNGT | 2 cut(s) | 276, 450 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 77 |
| BstBAI | YACGTR | 1 cut(s) | 251 |
| BstDEI | CTNAG | 4 cut(s) | 43, 182, 323, 395 |
| BstDSI | CCRYGG | 1 cut(s) | 275 |
| BstF5I | GGATG | 1 cut(s) | 360 |
| BstH2I | RGCGCY | 2 cut(s) | 14, 220 |
| BstHHI | GCGC | 2 cut(s) | 13, 219 |
| BstKTI | GATC | 6 cut(s) | 19, 34, 100, 165, 261, 457 |
| BstMBI | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 77, 80, 134 |
| BstNI | CCWGG | 2 cut(s) | 203, 364 |
| BstNSI | RCATGY | 1 cut(s) | 443 |
| BstSCI | CCNGG | 3 cut(s) | 145, 201, 362 |
| BstSLI | GKGCMC | 1 cut(s) | 161 |
| BstSNI | TACGTA | 1 cut(s) | 251 |
| BstV1I | GCAGC | 2 cut(s) | 70, 83 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 301 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| BsuRI | GGCC | 2 cut(s) | 117, 245 |
| BtgI | CCRYGG | 1 cut(s) | 275 |
| BtgZI | GCGATG | 1 cut(s) | 414 |
| BtsCI | GGATG | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 1 cut(s) | 393 |
| CfoI | GCGC | 2 cut(s) | 13, 219 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| Csp6I | GTAC | 3 cut(s) | 106, 248, 443 |
| CviAII | CATG | 4 cut(s) | 109, 266, 295, 440 |
| CviJI | RGCY | 8 cut(s) | 74, 117, 128, 245, 322, 382, 410, 426 |
| CviKI_1 | RGCY | 8 cut(s) | 74, 117, 128, 245, 322, 382, 410, 426 |
| CviQI | GTAC | 3 cut(s) | 106, 248, 443 |
| DdeI | CTNAG | 4 cut(s) | 43, 182, 323, 395 |
| DpnI | GATC | 6 cut(s) | 18, 33, 99, 164, 260, 456 |
| DpnII | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| EaeI | YGGCCR | 1 cut(s) | 115 |
| Eco105I | TACGTA | 1 cut(s) | 251 |
| Eco24I | GRGCYC | 2 cut(s) | 384, 428 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| Eco47III | AGCGCT | 2 cut(s) | 12, 218 |
| EcoRII | CCWGG | 2 cut(s) | 201, 362 |
| EcoT38I | GRGCYC | 2 cut(s) | 384, 428 |
| FaeI | CATG | 4 cut(s) | 112, 269, 298, 443 |
| FaiI | YATR | 7 cut(s) | 110, 209, 267, 296, 315, 351, 441 |
| FatI | CATG | 4 cut(s) | 108, 265, 294, 439 |
| FbaI | TGATCA | 2 cut(s) | 97, 454 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 81, 84 |
| FokI | GGATG | 1 cut(s) | 367 |
| FriOI | GRGCYC | 2 cut(s) | 384, 428 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 81, 84 |
| FspBI | CTAG | 1 cut(s) | 434 |
| GlaI | GCGC | 2 cut(s) | 12, 218 |
| GluI | GCNGC | 3 cut(s) | 72, 81, 84 |
| HaeII | RGCGCY | 2 cut(s) | 14, 220 |
| HaeIII | GGCC | 2 cut(s) | 117, 245 |
| HapII | CCGG | 2 cut(s) | 146, 256 |
| HhaI | GCGC | 2 cut(s) | 13, 219 |
| Hin1II | CATG | 4 cut(s) | 112, 269, 298, 443 |
| Hin6I | GCGC | 2 cut(s) | 11, 217 |
| HinP1I | GCGC | 2 cut(s) | 11, 217 |
| HinfI | GANTC | 2 cut(s) | 150, 325 |
| HpaII | CCGG | 2 cut(s) | 146, 256 |
| HphI | GGTGA | 1 cut(s) | 11 |
| Hpy166II | GTNNAC | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 4 cut(s) | 46, 132, 185, 459 |
| Hpy188III | TCNNGA | 1 cut(s) | 92 |
| Hpy8I | GTNNAC | 1 cut(s) | 122 |
| HpyAV | CCTTC | 2 cut(s) | 127, 370 |
| HpyCH4III | ACNGT | 2 cut(s) | 276, 450 |
| HpyCH4IV | ACGT | 1 cut(s) | 250 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 265 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 77, 80, 134 |
| HpyF3I | CTNAG | 4 cut(s) | 43, 182, 323, 395 |
| HpySE526I | ACGT | 1 cut(s) | 250 |
| Hsp92II | CATG | 4 cut(s) | 112, 269, 298, 443 |
| HspAI | GCGC | 2 cut(s) | 11, 217 |
| Ksp22I | TGATCA | 2 cut(s) | 97, 454 |
| Kzo9I | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| LmnI | GCTCC | 6 cut(s) | 8, 68, 133, 214, 387, 469 |
| Lsp1109I | GCAGC | 2 cut(s) | 70, 83 |
| LweI | GCATC | 1 cut(s) | 187 |
| MaeI | CTAG | 1 cut(s) | 434 |
| MaeII | ACGT | 1 cut(s) | 250 |
| MaeIII | GTNAC | 1 cut(s) | 251 |
| MalI | GATC | 6 cut(s) | 18, 33, 99, 164, 260, 456 |
| MboI | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 3 cut(s) | 161, 384, 428 |
| MlyI | GAGTC | 1 cut(s) | 334 |
| MmeI | TCCRAC | 1 cut(s) | 447 |
| MnlI | CCTC | 4 cut(s) | 32, 235, 263, 472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 299 |
| MspA1I | CMGCKG | 1 cut(s) | 83 |
| MspI | CCGG | 2 cut(s) | 146, 256 |
| MspR9I | CCNGG | 3 cut(s) | 147, 203, 364 |
| Mva1269I | GAATGC | 1 cut(s) | 466 |
| MvaI | CCWGG | 2 cut(s) | 203, 364 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 77, 80, 134 |
| NciI | CCSGG | 1 cut(s) | 147 |
| NdeII | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| NlaIII | CATG | 4 cut(s) | 112, 269, 298, 443 |
| NlaIV | GGNNCC | 2 cut(s) | 129, 383 |
| NspI | RCATGY | 1 cut(s) | 443 |
| PctI | GAATGC | 1 cut(s) | 466 |
| PfeI | GAWTC | 1 cut(s) | 150 |
| Pfl23II | CGTACG | 1 cut(s) | 247 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 208 |
| PfoI | TCCNGGA | 1 cut(s) | 201 |
| PkrI | GCNGC | 3 cut(s) | 73, 82, 85 |
| PleI | GAGTC | 1 cut(s) | 333 |
| PpsI | GAGTC | 1 cut(s) | 333 |
| Ppu21I | YACGTR | 1 cut(s) | 251 |
| Psp6I | CCWGG | 2 cut(s) | 201, 362 |
| PspGI | CCWGG | 2 cut(s) | 201, 362 |
| PspLI | CGTACG | 1 cut(s) | 247 |
| PspN4I | GGNNCC | 2 cut(s) | 129, 383 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| RsaI | GTAC | 3 cut(s) | 107, 249, 444 |
| RsaNI | GTAC | 3 cut(s) | 106, 248, 443 |
| RseI | CAYNNNNRTG | 1 cut(s) | 299 |
| SatI | GCNGC | 3 cut(s) | 72, 81, 84 |
| Sau3AI | GATC | 6 cut(s) | 16, 31, 97, 162, 258, 454 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| SchI | GAGTC | 1 cut(s) | 334 |
| ScrFI | CCNGG | 3 cut(s) | 147, 203, 364 |
| SduI | GDGCHC | 3 cut(s) | 161, 384, 428 |
| SetI | ASST | 4 cut(s) | 24, 253, 365, 483 |
| SfaNI | GCATC | 1 cut(s) | 187 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 299 |
| SnaBI | TACGTA | 1 cut(s) | 251 |
| SsiI | CCGC | 1 cut(s) | 81 |
| SspMI | CTAG | 1 cut(s) | 434 |
| StyD4I | CCNGG | 3 cut(s) | 145, 201, 362 |
| TaaI | ACNGT | 2 cut(s) | 276, 450 |
| TaiI | ACGT | 1 cut(s) | 253 |
| TaqI | TCGA | 2 cut(s) | 234, 286 |
| TatI | WGTACW | 1 cut(s) | 442 |
| TauI | GCSGC | 1 cut(s) | 83 |
| TfiI | GAWTC | 1 cut(s) | 150 |
| TscAI | CASTG | 1 cut(s) | 393 |
| TseI | GCWGC | 2 cut(s) | 71, 83 |
| TspRI | CASTG | 1 cut(s) | 393 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 208 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XceI | RCATGY | 1 cut(s) | 443 |
| XspI | CTAG | 1 cut(s) | 434 |