26S proteasome regulatory subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Choline_transpo | PF04515 | 103 - 376 | 2.3e-24 | Plasma-membrane choline transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 290 |
| Acc16I | TGCGCA | 1 cut(s) | 793 |
| Acc36I | ACCTGC | 2 cut(s) | 290, 588 |
| AccII | CGCG | 1 cut(s) | 323 |
| AciI | CCGC | 1 cut(s) | 627 |
| AclWI | GGATC | 1 cut(s) | 742 |
| AcoI | YGGCCR | 1 cut(s) | 1107 |
| AcsI | RAATTY | 1 cut(s) | 368 |
| AcuI | CTGAAG | 1 cut(s) | 1074 |
| AfaI | GTAC | 2 cut(s) | 261, 611 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 719 |
| AflII | CTTAAG | 1 cut(s) | 668 |
| AgsI | TTSAA | 2 cut(s) | 144, 332 |
| AjnI | CCWGG | 1 cut(s) | 188 |
| AluBI | AGCT | 3 cut(s) | 513, 896, 1140 |
| AluI | AGCT | 3 cut(s) | 513, 896, 1140 |
| Alw26I | GTCTC | 2 cut(s) | 83, 1063 |
| AlwI | GGATC | 1 cut(s) | 742 |
| AoxI | GGCC | 1 cut(s) | 1107 |
| ApeKI | GCWGC | 3 cut(s) | 296, 510, 583 |
| ApoI | RAATTY | 1 cut(s) | 368 |
| AspLEI | GCGC | 3 cut(s) | 323, 325, 794 |
| AsuHPI | GGTGA | 2 cut(s) | 178, 439 |
| AsuII | TTCGAA | 1 cut(s) | 203 |
| BalI | TGGCCA | 1 cut(s) | 1109 |
| BbvI | GCAGC | 3 cut(s) | 283, 522, 570 |
| BccI | CCATC | 2 cut(s) | 383, 710 |
| BciT130I | CCWGG | 1 cut(s) | 190 |
| BciVI | GTATCC | 3 cut(s) | 464, 487, 760 |
| BcoDI | GTCTC | 2 cut(s) | 83, 1063 |
| BfaI | CTAG | 1 cut(s) | 1007 |
| BfmI | CTRYAG | 3 cut(s) | 116, 297, 396 |
| BfrI | CTTAAG | 1 cut(s) | 668 |
| BfuAI | ACCTGC | 2 cut(s) | 290, 588 |
| BfuI | GTATCC | 3 cut(s) | 464, 487, 760 |
| BglII | AGATCT | 1 cut(s) | 949 |
| BisI | GCNGC | 3 cut(s) | 297, 511, 584 |
| BlpI | GCTNAGC | 1 cut(s) | 230 |
| BlsI | GCNGC | 3 cut(s) | 298, 512, 585 |
| Bme1390I | CCNGG | 1 cut(s) | 190 |
| BmiI | GGNNCC | 3 cut(s) | 493, 700, 711 |
| BmrFI | CCNGG | 1 cut(s) | 190 |
| BmsI | GCATC | 3 cut(s) | 574, 612, 899 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 230 |
| Bpu14I | TTCGAA | 1 cut(s) | 203 |
| BsaAI | YACGTR | 1 cut(s) | 1136 |
| BsaI | GGTCTC | 1 cut(s) | 83 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 621, 651 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 719 |
| Bse1I | ACTGG | 2 cut(s) | 713, 816 |
| Bse3DI | GCAATG | 1 cut(s) | 185 |
| BseBI | CCWGG | 1 cut(s) | 190 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 719 |
| BseMI | GCAATG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 244 |
| BseNI | ACTGG | 2 cut(s) | 713, 816 |
| BsePI | GCGCGC | 1 cut(s) | 321 |
| BseRI | GAGGAG | 2 cut(s) | 399, 504 |
| BseXI | GCAGC | 3 cut(s) | 283, 522, 570 |
| BseYI | CCCAGC | 3 cut(s) | 284, 348, 843 |
| BsgI | GTGCAG | 2 cut(s) | 270, 905 |
| Bsh1236I | CGCG | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 1109 |
| BsiSI | CCGG | 1 cut(s) | 480 |
| BslFI | GGGAC | 2 cut(s) | 342, 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 719 |
| BsmAI | GTCTC | 2 cut(s) | 83, 1063 |
| BsmFI | GGGAC | 2 cut(s) | 342, 389 |
| BsmI | GAATGC | 2 cut(s) | 47, 1070 |
| BsnI | GGCC | 1 cut(s) | 1109 |
| Bso31I | GGTCTC | 1 cut(s) | 83 |
| Bsp119I | TTCGAA | 1 cut(s) | 203 |
| Bsp143I | GATC | 3 cut(s) | 42, 734, 949 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 230 |
| BspACI | CCGC | 1 cut(s) | 627 |
| BspANI | GGCC | 1 cut(s) | 1109 |
| BspCNI | CTCAG | 1 cut(s) | 243 |
| BspFNI | CGCG | 1 cut(s) | 323 |
| BspLI | GGNNCC | 3 cut(s) | 493, 700, 711 |
| BspMAI | CTGCAG | 1 cut(s) | 301 |
| BspMI | ACCTGC | 2 cut(s) | 290, 588 |
| BspPI | GGATC | 1 cut(s) | 742 |
| BspQI | GCTCTTC | 1 cut(s) | 14 |
| BspT104I | TTCGAA | 1 cut(s) | 203 |
| BspTI | CTTAAG | 1 cut(s) | 668 |
| BspTNI | GGTCTC | 1 cut(s) | 83 |
| BsrDI | GCAATG | 1 cut(s) | 185 |
| BsrI | ACTGG | 2 cut(s) | 713, 816 |
| BssHII | GCGCGC | 1 cut(s) | 321 |
| BssMI | GATC | 3 cut(s) | 42, 734, 949 |
| Bst2UI | CCWGG | 1 cut(s) | 190 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 77, 120 |
| Bst6I | CTCTTC | 1 cut(s) | 14 |
| BstAFI | CTTAAG | 1 cut(s) | 668 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 164 |
| BstBAI | YACGTR | 1 cut(s) | 1136 |
| BstBI | TTCGAA | 1 cut(s) | 203 |
| BstC8I | GCNNGC | 4 cut(s) | 323, 346, 625, 888 |
| BstDEI | CTNAG | 4 cut(s) | 230, 545, 929, 946 |
| BstEII | GGTNACC | 1 cut(s) | 184 |
| BstFNI | CGCG | 1 cut(s) | 323 |
| BstHHI | GCGC | 3 cut(s) | 323, 325, 794 |
| BstKTI | GATC | 3 cut(s) | 45, 737, 952 |
| BstMAI | GTCTC | 2 cut(s) | 83, 1063 |
| BstMBI | GATC | 3 cut(s) | 42, 734, 949 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 798 |
| BstNI | CCWGG | 1 cut(s) | 190 |
| BstNSI | RCATGY | 4 cut(s) | 616, 627, 860, 1120 |
| BstPI | GGTNACC | 1 cut(s) | 184 |
| BstSCI | CCNGG | 1 cut(s) | 188 |
| BstSFI | CTRYAG | 3 cut(s) | 116, 297, 396 |
| BstSNI | TACGTA | 1 cut(s) | 1136 |
| BstUI | CGCG | 1 cut(s) | 323 |
| BstV1I | GCAGC | 3 cut(s) | 283, 522, 570 |
| BstX2I | RGATCY | 1 cut(s) | 949 |
| BstYI | RGATCY | 1 cut(s) | 949 |
| BsuI | GTATCC | 3 cut(s) | 464, 487, 760 |
| BsuRI | GGCC | 1 cut(s) | 1109 |
| BtsI | GCAGTG | 1 cut(s) | 495 |
| BtsIMutI | CAGTG | 2 cut(s) | 495, 1018 |
| BveI | ACCTGC | 2 cut(s) | 290, 588 |
| Cac8I | GCNNGC | 4 cut(s) | 323, 346, 625, 888 |
| CfoI | GCGC | 3 cut(s) | 323, 325, 794 |
| CsiI | ACCWGGT | 1 cut(s) | 188 |
| Csp6I | GTAC | 2 cut(s) | 260, 610 |
| CviAII | CATG | 9 cut(s) | 555, 613, 624, 748, 789, 857, 903, 1105, 1117 |
| CviQI | GTAC | 2 cut(s) | 260, 610 |
| DdeI | CTNAG | 4 cut(s) | 230, 545, 929, 946 |
| DpnI | GATC | 3 cut(s) | 44, 736, 951 |
| DpnII | GATC | 3 cut(s) | 42, 734, 949 |
| EaeI | YGGCCR | 1 cut(s) | 1107 |
| Eam1104I | CTCTTC | 1 cut(s) | 14 |
| EarI | CTCTTC | 1 cut(s) | 14 |
| Eco105I | TACGTA | 1 cut(s) | 1136 |
| Eco31I | GGTCTC | 1 cut(s) | 83 |
| Eco57I | CTGAAG | 1 cut(s) | 1074 |
| Eco91I | GGTNACC | 1 cut(s) | 184 |
| EcoO65I | GGTNACC | 1 cut(s) | 184 |
| EcoRII | CCWGG | 1 cut(s) | 188 |
| EcoT22I | ATGCAT | 2 cut(s) | 567, 1072 |
| FaeI | CATG | 9 cut(s) | 558, 616, 627, 751, 792, 860, 906, 1108, 1120 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 637, 669 |
| FaqI | GGGAC | 2 cut(s) | 342, 389 |
| FatI | CATG | 9 cut(s) | 554, 612, 623, 747, 788, 856, 902, 1104, 1116 |
| Fnu4HI | GCNGC | 3 cut(s) | 297, 511, 584 |
| Fsp4HI | GCNGC | 3 cut(s) | 297, 511, 584 |
| FspBI | CTAG | 1 cut(s) | 1007 |
| FspI | TGCGCA | 1 cut(s) | 793 |
| GlaI | GCGC | 3 cut(s) | 322, 324, 793 |
| GluI | GCNGC | 3 cut(s) | 297, 511, 584 |
| GsaI | CCCAGC | 3 cut(s) | 288, 352, 847 |
| HaeIII | GGCC | 1 cut(s) | 1109 |
| HapII | CCGG | 1 cut(s) | 480 |
| HhaI | GCGC | 3 cut(s) | 323, 325, 794 |
| Hin1II | CATG | 9 cut(s) | 558, 616, 627, 751, 792, 860, 906, 1108, 1120 |
| Hin6I | GCGC | 3 cut(s) | 321, 323, 792 |
| HinP1I | GCGC | 3 cut(s) | 321, 323, 792 |
| HincII | GTYRAC | 1 cut(s) | 640 |
| HindII | GTYRAC | 1 cut(s) | 640 |
| HinfI | GANTC | 4 cut(s) | 820, 838, 864, 1024 |
| HpaII | CCGG | 1 cut(s) | 480 |
| HphI | GGTGA | 2 cut(s) | 178, 439 |
| Hpy166II | GTNNAC | 3 cut(s) | 73, 260, 640 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 722, 989 |
| Hpy188III | TCNNGA | 7 cut(s) | 40, 52, 379, 574, 807, 916, 1075 |
| Hpy8I | GTNNAC | 3 cut(s) | 73, 260, 640 |
| HpyAV | CCTTC | 1 cut(s) | 210 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 77, 120 |
| HpyCH4IV | ACGT | 1 cut(s) | 1135 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 798 |
| HpyF3I | CTNAG | 4 cut(s) | 230, 545, 929, 946 |
| HpySE526I | ACGT | 1 cut(s) | 1135 |
| Hsp92II | CATG | 9 cut(s) | 558, 616, 627, 751, 792, 860, 906, 1108, 1120 |
| HspAI | GCGC | 3 cut(s) | 321, 323, 792 |
| Kzo9I | GATC | 3 cut(s) | 42, 734, 949 |
| LguI | GCTCTTC | 1 cut(s) | 14 |
| LmnI | GCTCC | 3 cut(s) | 133, 491, 704 |
| Lsp1109I | GCAGC | 3 cut(s) | 283, 522, 570 |
| LweI | GCATC | 3 cut(s) | 574, 612, 899 |
| MabI | ACCWGGT | 1 cut(s) | 188 |
| MaeI | CTAG | 1 cut(s) | 1007 |
| MaeII | ACGT | 1 cut(s) | 1135 |
| MaeIII | GTNAC | 2 cut(s) | 184, 589 |
| MalI | GATC | 3 cut(s) | 44, 736, 951 |
| MboI | GATC | 3 cut(s) | 42, 734, 949 |
| MboII | GAAGA | 1 cut(s) | 644 |
| MfeI | CAATTG | 1 cut(s) | 159 |
| MflI | RGATCY | 1 cut(s) | 949 |
| MlsI | TGGCCA | 1 cut(s) | 1109 |
| MluCI | AATT | 6 cut(s) | 159, 368, 441, 594, 752, 1032 |
| MluNI | TGGCCA | 1 cut(s) | 1109 |
| MlyI | GAGTC | 3 cut(s) | 814, 873, 1018 |
| MmeI | TCCRAC | 2 cut(s) | 841, 967 |
| MnlI | CCTC | 8 cut(s) | 417, 420, 467, 473, 482, 643, 737, 983 |
| Mox20I | TGGCCA | 1 cut(s) | 1109 |
| Mph1103I | ATGCAT | 2 cut(s) | 567, 1072 |
| MscI | TGGCCA | 1 cut(s) | 1109 |
| MseI | TTAA | 4 cut(s) | 170, 194, 213, 669 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1115 |
| Msp20I | TGGCCA | 1 cut(s) | 1109 |
| MspA1I | CMGCKG | 1 cut(s) | 896 |
| MspCI | CTTAAG | 1 cut(s) | 668 |
| MspI | CCGG | 1 cut(s) | 480 |
| MspR9I | CCNGG | 1 cut(s) | 190 |
| MunI | CAATTG | 1 cut(s) | 159 |
| Mva1269I | GAATGC | 2 cut(s) | 47, 1070 |
| MvaI | CCWGG | 1 cut(s) | 190 |
| MvnI | CGCG | 1 cut(s) | 323 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 798 |
| NdeII | GATC | 3 cut(s) | 42, 734, 949 |
| NlaIII | CATG | 9 cut(s) | 558, 616, 627, 751, 792, 860, 906, 1108, 1120 |
| NlaIV | GGNNCC | 3 cut(s) | 493, 700, 711 |
| NmuCI | GTSAC | 2 cut(s) | 184, 589 |
| NsbI | TGCGCA | 1 cut(s) | 793 |
| NsiI | ATGCAT | 2 cut(s) | 567, 1072 |
| NspI | RCATGY | 4 cut(s) | 616, 627, 860, 1120 |
| NspV | TTCGAA | 1 cut(s) | 203 |
| PaeI | GCATGC | 1 cut(s) | 627 |
| PaqCI | CACCTGC | 1 cut(s) | 290 |
| PauI | GCGCGC | 1 cut(s) | 321 |
| PciSI | GCTCTTC | 1 cut(s) | 14 |
| PctI | GAATGC | 2 cut(s) | 47, 1070 |
| PfeI | GAWTC | 1 cut(s) | 838 |
| PkrI | GCNGC | 3 cut(s) | 298, 512, 585 |
| PleI | GAGTC | 3 cut(s) | 814, 872, 1018 |
| PpsI | GAGTC | 3 cut(s) | 814, 872, 1018 |
| Ppu21I | YACGTR | 1 cut(s) | 1136 |
| Psp6I | CCWGG | 1 cut(s) | 188 |
| PspEI | GGTNACC | 1 cut(s) | 184 |
| PspFI | CCCAGC | 3 cut(s) | 284, 348, 843 |
| PspGI | CCWGG | 1 cut(s) | 188 |
| PspN4I | GGNNCC | 3 cut(s) | 493, 700, 711 |
| PstI | CTGCAG | 1 cut(s) | 301 |
| PsuI | RGATCY | 1 cut(s) | 949 |
| PteI | GCGCGC | 1 cut(s) | 321 |
| PvuII | CAGCTG | 1 cut(s) | 896 |
| RsaI | GTAC | 2 cut(s) | 261, 611 |
| RsaNI | GTAC | 2 cut(s) | 260, 610 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SapI | GCTCTTC | 1 cut(s) | 14 |
| SaqAI | TTAA | 4 cut(s) | 170, 194, 213, 669 |
| SatI | GCNGC | 3 cut(s) | 297, 511, 584 |
| Sau3AI | GATC | 3 cut(s) | 42, 734, 949 |
| SchI | GAGTC | 3 cut(s) | 814, 873, 1018 |
| ScrFI | CCNGG | 1 cut(s) | 190 |
| SexAI | ACCWGGT | 1 cut(s) | 188 |
| SfaNI | GCATC | 3 cut(s) | 574, 612, 899 |
| SfcI | CTRYAG | 3 cut(s) | 116, 297, 396 |
| SfuI | TTCGAA | 1 cut(s) | 203 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SmlI | CTYRAG | 1 cut(s) | 668 |
| SmoI | CTYRAG | 1 cut(s) | 668 |
| SnaBI | TACGTA | 1 cut(s) | 1136 |
| SphI | GCATGC | 1 cut(s) | 627 |
| Sse9I | AATT | 6 cut(s) | 159, 368, 441, 594, 752, 1032 |
| SsiI | CCGC | 1 cut(s) | 627 |
| SspMI | CTAG | 1 cut(s) | 1007 |
| StyD4I | CCNGG | 1 cut(s) | 188 |
| TaaI | ACNGT | 3 cut(s) | 70, 77, 120 |
| TaiI | ACGT | 1 cut(s) | 1138 |
| TaqI | TCGA | 4 cut(s) | 203, 366, 818, 942 |
| TasI | AATT | 6 cut(s) | 159, 368, 441, 594, 752, 1032 |
| TatI | WGTACW | 2 cut(s) | 259, 609 |
| TfiI | GAWTC | 1 cut(s) | 838 |
| Tru1I | TTAA | 4 cut(s) | 170, 194, 213, 669 |
| Tru9I | TTAA | 4 cut(s) | 170, 194, 213, 669 |
| TscAI | CASTG | 2 cut(s) | 502, 1018 |
| TseFI | GTSAC | 2 cut(s) | 184, 589 |
| TseI | GCWGC | 3 cut(s) | 296, 510, 583 |
| Tsp45I | GTSAC | 2 cut(s) | 184, 589 |
| TspDTI | ATGAA | 3 cut(s) | 764, 777, 1025 |
| TspRI | CASTG | 2 cut(s) | 502, 1018 |
| Vha464I | CTTAAG | 1 cut(s) | 668 |
| XapI | RAATTY | 1 cut(s) | 368 |
| XceI | RCATGY | 4 cut(s) | 616, 627, 860, 1120 |
| XspI | CTAG | 1 cut(s) | 1007 |
| Zsp2I | ATGCAT | 2 cut(s) | 567, 1072 |