Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 109, 174 |
| AccBSI | CCGCTC | 1 cut(s) | 206 |
| AciI | CCGC | 2 cut(s) | 83, 206 |
| AclWI | GGATC | 1 cut(s) | 2 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 109, 174 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| AlwI | GGATC | 1 cut(s) | 2 |
| AoxI | GGCC | 1 cut(s) | 271 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 2 cut(s) | 92, 220 |
| BccI | CCATC | 1 cut(s) | 206 |
| BclI | TGATCA | 1 cut(s) | 235 |
| BisI | GCNGC | 1 cut(s) | 84 |
| BlpI | GCTNAGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 85 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmsI | GCATC | 1 cut(s) | 153 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 1 cut(s) | 275 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 109, 174 |
| BseDI | CCNNGG | 1 cut(s) | 275 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 109, 174 |
| BseYI | CCCAGC | 1 cut(s) | 74 |
| BsgI | GTGCAG | 1 cut(s) | 248 |
| BshFI | GGCC | 1 cut(s) | 273 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 109, 174 |
| BsnI | GGCC | 1 cut(s) | 273 |
| Bsp143I | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 70 |
| Bsp19I | CCATGG | 1 cut(s) | 275 |
| BspACI | CCGC | 2 cut(s) | 83, 206 |
| BspANI | GGCC | 1 cut(s) | 273 |
| BspPI | GGATC | 1 cut(s) | 2 |
| BsrBI | CCGCTC | 1 cut(s) | 206 |
| BssECI | CCNNGG | 1 cut(s) | 275 |
| BssMI | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| BssT1I | CCWWGG | 1 cut(s) | 275 |
| Bst4CI | ACNGT | 2 cut(s) | 120, 257 |
| BstDEI | CTNAG | 1 cut(s) | 70 |
| BstDSI | CCRYGG | 1 cut(s) | 275 |
| BstKTI | GATC | 5 cut(s) | 10, 15, 64, 238, 250 |
| BstMBI | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 7 |
| BstYI | RGATCY | 1 cut(s) | 7 |
| BsuRI | GGCC | 1 cut(s) | 273 |
| BtgI | CCRYGG | 1 cut(s) | 275 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| CviAII | CATG | 4 cut(s) | 56, 109, 181, 276 |
| CviJI | RGCY | 6 cut(s) | 21, 53, 69, 74, 136, 273 |
| CviKI_1 | RGCY | 6 cut(s) | 21, 53, 69, 74, 136, 273 |
| DdeI | CTNAG | 1 cut(s) | 70 |
| DpnI | GATC | 5 cut(s) | 9, 14, 63, 237, 249 |
| DpnII | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| Eco130I | CCWWGG | 1 cut(s) | 275 |
| EcoT14I | CCWWGG | 1 cut(s) | 275 |
| ErhI | CCWWGG | 1 cut(s) | 275 |
| FaeI | CATG | 4 cut(s) | 59, 112, 184, 279 |
| FaiI | YATR | 5 cut(s) | 57, 110, 175, 182, 277 |
| FatI | CATG | 4 cut(s) | 55, 108, 180, 275 |
| FbaI | TGATCA | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 1 cut(s) | 84 |
| Fsp4HI | GCNGC | 1 cut(s) | 84 |
| GluI | GCNGC | 1 cut(s) | 84 |
| GsaI | CCCAGC | 1 cut(s) | 78 |
| HaeIII | GGCC | 1 cut(s) | 273 |
| Hin1II | CATG | 4 cut(s) | 59, 112, 184, 279 |
| HinfI | GANTC | 3 cut(s) | 95, 150, 214 |
| HphI | GGTGA | 2 cut(s) | 92, 220 |
| Hpy188I | TCNGA | 3 cut(s) | 12, 132, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 239 |
| HpyAV | CCTTC | 1 cut(s) | 178 |
| HpyCH4III | ACNGT | 2 cut(s) | 120, 257 |
| HpyCH4V | TGCA | 2 cut(s) | 91, 265 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 70 |
| Hsp92II | CATG | 4 cut(s) | 59, 112, 184, 279 |
| Ksp22I | TGATCA | 1 cut(s) | 235 |
| Kzo9I | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| LmnI | GCTCC | 1 cut(s) | 177 |
| LpnPI | CCDG | 6 cut(s) | 31, 60, 77, 128, 132, 242 |
| LweI | GCATC | 1 cut(s) | 153 |
| MaeIII | GTNAC | 1 cut(s) | 25 |
| MalI | GATC | 5 cut(s) | 9, 14, 63, 237, 249 |
| MbiI | CCGCTC | 1 cut(s) | 206 |
| MboI | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| MboII | GAAGA | 2 cut(s) | 254, 257 |
| MflI | RGATCY | 1 cut(s) | 7 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MnlI | CCTC | 2 cut(s) | 204, 263 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 80 |
| NcoI | CCATGG | 1 cut(s) | 275 |
| NdeII | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| NlaIII | CATG | 4 cut(s) | 59, 112, 184, 279 |
| NmeAIII | GCCGAG | 1 cut(s) | 45 |
| NmuCI | GTSAC | 1 cut(s) | 25 |
| PfeI | GAWTC | 2 cut(s) | 150, 214 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 109, 174 |
| PkrI | GCNGC | 1 cut(s) | 85 |
| PleI | GAGTC | 1 cut(s) | 89 |
| PpsI | GAGTC | 1 cut(s) | 89 |
| PspFI | CCCAGC | 1 cut(s) | 74 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PsuI | RGATCY | 1 cut(s) | 7 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SatI | GCNGC | 1 cut(s) | 84 |
| Sau3AI | GATC | 5 cut(s) | 7, 12, 61, 235, 247 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| SchI | GAGTC | 1 cut(s) | 89 |
| SetI | ASST | 1 cut(s) | 76 |
| SfaNI | GCATC | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| SsiI | CCGC | 2 cut(s) | 83, 206 |
| StyI | CCWWGG | 1 cut(s) | 275 |
| TaaI | ACNGT | 2 cut(s) | 120, 257 |
| TaqI | TCGA | 2 cut(s) | 60, 250 |
| TauI | GCSGC | 1 cut(s) | 86 |
| TfiI | GAWTC | 2 cut(s) | 150, 214 |
| TseFI | GTSAC | 1 cut(s) | 25 |
| Tsp45I | GTSAC | 1 cut(s) | 25 |
| TspDTI | ATGAA | 2 cut(s) | 142, 197 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 109, 174 |