FvH4_2g21281

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000049
Physical Location & Seq
Forward (+)
17717246 .. 17718632
1387 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g21281.t1

Sequence Viewer

Length: 1230 bp
ATGGCTTCCGCTATTGCATCTTTGTCAACGGCTTTTCAAGCCGCGACATCCAATCTGTTGCTCTCGAACTCTTCCCGACTCAAGATCGGAATTGAAAGGGGGGCGGCGACCAAAGATGATCATTCCTACCTGGTAGGTCGATTGTTGGGCCCTAAGGACAAGTTTCCAGGCTTCAAAGGTACCATCTCCACGATTTGGAGAGTGAAGAAGGGGTTGTCCATCTCTGATGTTGGGGATCGCTATGTGTTCCAATTTGATCGAGTTTCGGTTCGTAATCAGGGACTGCCGCACCTTCTTAGAAACCCTACGGCTTTGAGAATGGTGGGCACAGGTCTTGGCCGTGTCATTCGATTTGATCCACAAGCTTTGAAGCGGAAGGAGGAGATTCAACGCATTCGGTTGGAGTTTGATGTTCGTCGCCGTATTAGGGTTTGGCAAGAGGTTGAATTTGAGGCTGATGAGATTGTGGTGGAATTGGATTTCACTTTTGAGAAGGTGAAAGGTTTTTGTAAGAGGTGTGGTCTATTCATGCATGATGCTACAGGCTGTGACCGAATGGTGGAGCTTGAGAGAGCAGCTATCAAGGCCCCTCCGACGGAGGAGTTAGGCAATCTCTCTCTATTCTCAAACTCGGTTTTTGTTCCTAGGGTTCTTGAGGGTGGCCCGAGGTCTGCCCATGCAATGAAGTCTCAGACAACTTCTTTGCTCTCTGTCGACACAGGTGGCAGCTCTAACTCAGTGGTATCACCGGTGAAAGGTAGTGGTGGAGGTAAAAGCTTTCTCAATTTCCCTGAACCATCTCTGAATATTGCTGAGACAGGATTTGTGGCTTTGGTTCATCATCAAGGCCATTTGGTTGTATCCCCAAAGAAGAAGAAGAAGTTAGGTCGCCCTTATGGCAGCAAGAACAAACTTAGAACAGAGCCCGCTCCTGTGATCAAGAAATGGAAGAGTCACAAGAAAGTTTCCTCCTCCGAGAAGACTACTACTAAAGGGCTTGTTTCTGTAGGTTTGGTGATTCCTTTGGTCACCGAGAAGAATCTGGAAGGGGAAGCAAGAGGCAACCCATCTGTACAGATGCAAGAGGTTTCTGGTGGTATGGTTGTTGAGGTGGGGATGCTCAAGGAGGCACTAACTCAGGATCCAGAGATAGAAGTGCTAATGATTAAGGTACAGGCTAAGAAGGGTGAGGAGGATGCGTTTGGCGTCCCTCTCATAAAATCTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

410

Amino Acids

44.79

Weight (kDa)

9.76

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 136 - 184 4.5e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 179
AccB1I GGYRCC 1 cut(s) 179
AccB7I CCANNNNNTGG 1 cut(s) 195
AccBSI CCGCTC 1 cut(s) 929
AccI GTMKAC 1 cut(s) 714
AccII CGCG 1 cut(s) 44
AciI CCGC 6 cut(s) 9, 42, 104, 287, 373, 927
AclWI GGATC 4 cut(s) 243, 350, 1136, 1149
AcoI YGGCCR 1 cut(s) 337
AcsI RAATTY 1 cut(s) 446
AcyI GRCGYC 1 cut(s) 1206
AfaI GTAC 3 cut(s) 181, 1074, 1173
AfiI CCNNNNNNNGG 5 cut(s) 195, 427, 559, 595, 755
AgeI ACCGGT 1 cut(s) 748
AgsI TTSAA 6 cut(s) 38, 95, 175, 370, 389, 446
AjnI CCWGG 2 cut(s) 129, 166
AluBI AGCT 5 cut(s) 365, 565, 578, 729, 777
AluI AGCT 5 cut(s) 365, 565, 578, 729, 777
Alw26I GTCTC 2 cut(s) 693, 809
AlwI GGATC 4 cut(s) 243, 350, 1136, 1149
AlwNI CAGNNNCTG 1 cut(s) 283
Ama87I CYCGRG 1 cut(s) 664
AoxI GGCC 5 cut(s) 148, 337, 585, 661, 847
ApaI GGGCCC 1 cut(s) 152
ApeKI GCWGC 3 cut(s) 575, 726, 900
ApoI RAATTY 1 cut(s) 446
ArsI GACNNNNNNTTYG 2 cut(s) 685, 717
AsiGI ACCGGT 1 cut(s) 748
Asp718I GGTACC 1 cut(s) 179
AspA2I CCTAGG 1 cut(s) 644
AspS9I GGNCC 4 cut(s) 148, 149, 586, 662
AsuHPI GGTGA 6 cut(s) 508, 738, 763, 1021, 1027, 1199
AvaI CYCGRG 1 cut(s) 664
AvrII CCTAGG 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 153
BaeGI GKGCMC 2 cut(s) 152, 329
BamHI GGATCC 1 cut(s) 1141
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 2 cut(s) 152, 927
BbsI GAAGAC 1 cut(s) 986
BbvI GCAGC 3 cut(s) 587, 738, 912
BccI CCATC 4 cut(s) 191, 227, 805, 1075
BceAI ACGGC 4 cut(s) 45, 324, 324, 405
BciT130I CCWGG 2 cut(s) 131, 168
BciVI GTATCC 1 cut(s) 871
BclI TGATCA 2 cut(s) 118, 936
BcoDI GTCTC 2 cut(s) 693, 809
BfaI CTAG 1 cut(s) 645
BfmI CTRYAG 2 cut(s) 540, 1005
BfuI GTATCC 1 cut(s) 871
BglI GCCNNNNNGGC 1 cut(s) 897
BisI GCNGC 6 cut(s) 42, 105, 287, 576, 727, 901
BlnI CCTAGG 1 cut(s) 644
BlsI GCNGC 6 cut(s) 43, 106, 288, 577, 728, 902
Bme1390I CCNGG 2 cut(s) 131, 168
BmeT110I CYCGRG 1 cut(s) 664
BmgT120I GGNCC 4 cut(s) 148, 149, 586, 662
BmiI GGNNCC 4 cut(s) 150, 181, 588, 1143
BmrFI CCNGG 2 cut(s) 131, 168
BmsI GCATC 5 cut(s) 26, 526, 1068, 1107, 1186
BpiI GAAGAC 1 cut(s) 986
BpuEI CTTGAG 4 cut(s) 65, 587, 674, 1106
BsaHI GRCGYC 1 cut(s) 1206
BsaJI CCNNGG 2 cut(s) 644, 665
BsaWI WCCGGW 1 cut(s) 748
BsaXI ACNNNNNCTCC 2 cut(s) 1184, 1214
Bsc4I CCNNNNNNNGG 5 cut(s) 195, 427, 559, 595, 755
Bse118I RCCGGY 1 cut(s) 748
Bse21I CCTNAGG 1 cut(s) 153
Bse3DI GCAATG 1 cut(s) 687
BseBI CCWGG 2 cut(s) 131, 168
BseDI CCNNGG 2 cut(s) 644, 665
BseGI GGATG 3 cut(s) 47, 1122, 1201
BseLI CCNNNNNNNGG 5 cut(s) 195, 427, 559, 595, 755
BseMI GCAATG 1 cut(s) 687
BseMII CTCAG 4 cut(s) 704, 750, 804, 1151
BseRI GAGGAG 4 cut(s) 395, 614, 961, 1205
BseSI GKGCMC 2 cut(s) 152, 329
BseXI GCAGC 3 cut(s) 587, 738, 912
Bsh1236I CGCG 1 cut(s) 44
BshFI GGCC 5 cut(s) 150, 339, 587, 663, 849
BshNI GGYRCC 1 cut(s) 179
BshTI ACCGGT 1 cut(s) 748
BsiHKCI CYCGRG 1 cut(s) 664
BsiSI CCGG 1 cut(s) 749
BslFI GGGAC 2 cut(s) 294, 1193
BslI CCNNNNNNNGG 5 cut(s) 195, 427, 559, 595, 755
BsmAI GTCTC 2 cut(s) 693, 809
BsmFI GGGAC 2 cut(s) 294, 1193
BsmI GAATGC 1 cut(s) 393
BsnI GGCC 5 cut(s) 150, 339, 587, 663, 849
BsoBI CYCGRG 1 cut(s) 664
Bsp120I GGGCCC 1 cut(s) 148
Bsp1286I GDGCHC 3 cut(s) 152, 329, 927
Bsp1407I TGTACA 1 cut(s) 1072
Bsp143I GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
BspACI CCGC 6 cut(s) 9, 42, 104, 287, 373, 927
BspANI GGCC 5 cut(s) 150, 339, 587, 663, 849
BspCNI CTCAG 4 cut(s) 703, 749, 805, 1150
BspFNI CGCG 1 cut(s) 44
BspLI GGNNCC 4 cut(s) 150, 181, 588, 1143
BspPI GGATC 4 cut(s) 243, 350, 1136, 1149
BspT107I GGYRCC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 929
BsrDI GCAATG 1 cut(s) 687
BsrFI RCCGGY 1 cut(s) 748
BsrGI TGTACA 1 cut(s) 1072
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 2 cut(s) 644, 665
BssMI GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
BssNI GRCGYC 1 cut(s) 1206
BssT1I CCWWGG 1 cut(s) 644
Bst2UI CCWGG 2 cut(s) 131, 168
Bst6I CTCTTC 2 cut(s) 76, 944
BstACI GRCGYC 1 cut(s) 1206
BstAUI TGTACA 1 cut(s) 1072
BstC8I GCNNGC 1 cut(s) 927
BstDEI CTNAG 8 cut(s) 153, 296, 690, 736, 813, 914, 1137, 1179
BstEII GGTNACC 1 cut(s) 1027
BstF5I GGATG 3 cut(s) 47, 1122, 1201
BstFNI CGCG 1 cut(s) 44
BstKTI GATC 7 cut(s) 87, 121, 238, 259, 358, 939, 1144
BstMAI GTCTC 2 cut(s) 693, 809
BstMBI GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
BstMWI GCNNNNNNNGC 3 cut(s) 38, 584, 897
BstNI CCWGG 2 cut(s) 131, 168
BstPI GGTNACC 1 cut(s) 1027
BstSCI CCNGG 2 cut(s) 129, 166
BstSFI CTRYAG 2 cut(s) 540, 1005
BstSLI GKGCMC 2 cut(s) 152, 329
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 3 cut(s) 587, 738, 912
BstV2I GAAGAC 1 cut(s) 986
BstX2I RGATCY 1 cut(s) 1141
BstYI RGATCY 1 cut(s) 1141
Bsu36I CCTNAGG 1 cut(s) 153
BsuI GTATCC 1 cut(s) 871
BsuRI GGCC 5 cut(s) 150, 339, 587, 663, 849
BtsCI GGATG 3 cut(s) 47, 1122, 1201
BtsIMutI CAGTG 1 cut(s) 744
Cac8I GCNNGC 1 cut(s) 927
CaiI CAGNNNCTG 1 cut(s) 283
Cfr10I RCCGGY 1 cut(s) 748
Cfr13I GGNCC 4 cut(s) 148, 149, 586, 662
CseI GACGC 1 cut(s) 1195
CsiI ACCWGGT 1 cut(s) 129
Csp6I GTAC 3 cut(s) 180, 1073, 1172
CspAI ACCGGT 1 cut(s) 748
CspCI CAANNNNNGTGG 2 cut(s) 348, 383
CviAII CATG 3 cut(s) 529, 533, 677
CviQI GTAC 3 cut(s) 180, 1073, 1172
DdeI CTNAG 8 cut(s) 153, 296, 690, 736, 813, 914, 1137, 1179
DpnI GATC 7 cut(s) 86, 120, 237, 258, 357, 938, 1143
DpnII GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
EaeI YGGCCR 1 cut(s) 337
Eam1104I CTCTTC 2 cut(s) 76, 944
EarI CTCTTC 2 cut(s) 76, 944
Eco130I CCWWGG 1 cut(s) 644
Eco24I GRGCYC 2 cut(s) 152, 927
Eco81I CCTNAGG 1 cut(s) 153
Eco88I CYCGRG 1 cut(s) 664
Eco91I GGTNACC 1 cut(s) 1027
EcoO109I RGGNCCY 2 cut(s) 149, 586
EcoO65I GGTNACC 1 cut(s) 1027
EcoRII CCWGG 2 cut(s) 129, 166
EcoT14I CCWWGG 1 cut(s) 644
EcoT22I ATGCAT 1 cut(s) 534
EcoT38I GRGCYC 2 cut(s) 152, 927
ErhI CCWWGG 1 cut(s) 644
FaeI CATG 3 cut(s) 532, 536, 680
FaiI YATR 7 cut(s) 243, 530, 534, 678, 897, 1100, 1217
FaqI GGGAC 2 cut(s) 294, 1193
FatI CATG 3 cut(s) 528, 532, 676
FauI CCCGC 1 cut(s) 934
FbaI TGATCA 2 cut(s) 118, 936
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 6 cut(s) 42, 105, 287, 576, 727, 901
FokI GGATG 3 cut(s) 34, 1129, 1208
FriOI GRGCYC 2 cut(s) 152, 927
Fsp4HI GCNGC 6 cut(s) 42, 105, 287, 576, 727, 901
FspBI CTAG 1 cut(s) 645
GluI GCNGC 6 cut(s) 42, 105, 287, 576, 727, 901
HaeIII GGCC 5 cut(s) 150, 339, 587, 663, 849
HapII CCGG 1 cut(s) 749
HgaI GACGC 1 cut(s) 1195
Hin1I GRCGYC 1 cut(s) 1206
Hin1II CATG 3 cut(s) 532, 536, 680
HincII GTYRAC 2 cut(s) 27, 715
HindII GTYRAC 2 cut(s) 27, 715
HindIII AAGCTT 2 cut(s) 363, 775
HinfI GANTC 5 cut(s) 78, 385, 952, 1018, 1039
HpaII CCGG 1 cut(s) 749
HphI GGTGA 6 cut(s) 508, 738, 763, 1021, 1027, 1199
Hpy166II GTNNAC 2 cut(s) 27, 715
Hpy188I TCNGA 6 cut(s) 89, 226, 594, 693, 804, 976
Hpy188III TCNNGA 8 cut(s) 64, 75, 82, 653, 940, 1043, 1139, 1145
Hpy8I GTNNAC 2 cut(s) 27, 715
Hpy99I CGWCG 2 cut(s) 420, 598
HpyAV CCTTC 6 cut(s) 202, 302, 370, 487, 1040, 1177
HpyCH4V TGCA 4 cut(s) 17, 532, 680, 1081
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 584, 897
HpyF3I CTNAG 8 cut(s) 153, 296, 690, 736, 813, 914, 1137, 1179
Hsp92I GRCGYC 1 cut(s) 1206
Hsp92II CATG 3 cut(s) 532, 536, 680
KpnI GGTACC 1 cut(s) 183
Ksp22I TGATCA 2 cut(s) 118, 936
Kzo9I GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
LmnI GCTCC 2 cut(s) 562, 934
Lsp1109I GCAGC 3 cut(s) 587, 738, 912
LweI GCATC 5 cut(s) 26, 526, 1068, 1107, 1186
MabI ACCWGGT 1 cut(s) 129
MaeI CTAG 1 cut(s) 645
MaeIII GTNAC 3 cut(s) 548, 953, 1027
MalI GATC 7 cut(s) 86, 120, 237, 258, 357, 938, 1143
MbiI CCGCTC 1 cut(s) 929
MboI GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
MboII GAAGA 8 cut(s) 63, 217, 883, 886, 889, 961, 991, 1048
MflI RGATCY 1 cut(s) 1141
MhlI GDGCHC 3 cut(s) 152, 329, 927
MluCI AATT 5 cut(s) 90, 251, 446, 473, 784
MlyI GAGTC 2 cut(s) 72, 961
MmeI TCCRAC 2 cut(s) 381, 617
Mph1103I ATGCAT 1 cut(s) 534
MseI TTAA 2 cut(s) 1167, 1228
MspI CCGG 1 cut(s) 749
MspR9I CCNGG 2 cut(s) 131, 168
Mva1269I GAATGC 1 cut(s) 393
MvaI CCWGG 2 cut(s) 131, 168
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 3 cut(s) 38, 584, 897
NdeII GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
NlaIII CATG 3 cut(s) 532, 536, 680
NlaIV GGNNCC 4 cut(s) 150, 181, 588, 1143
NmuCI GTSAC 3 cut(s) 548, 953, 1027
NsiI ATGCAT 1 cut(s) 534
PctI GAATGC 1 cut(s) 393
PfeI GAWTC 3 cut(s) 385, 1018, 1039
PflMI CCANNNNNTGG 1 cut(s) 195
PinAI ACCGGT 1 cut(s) 748
PkrI GCNGC 6 cut(s) 43, 106, 288, 577, 728, 902
PleI GAGTC 2 cut(s) 72, 960
PpsI GAGTC 2 cut(s) 72, 960
Psp6I CCWGG 2 cut(s) 129, 166
PspEI GGTNACC 1 cut(s) 1027
PspGI CCWGG 2 cut(s) 129, 166
PspN4I GGNNCC 4 cut(s) 150, 181, 588, 1143
PspOMI GGGCCC 1 cut(s) 148
PspPI GGNCC 4 cut(s) 148, 149, 586, 662
PstNI CAGNNNCTG 1 cut(s) 283
PsuI RGATCY 1 cut(s) 1141
RsaI GTAC 3 cut(s) 181, 1074, 1173
RsaNI GTAC 3 cut(s) 180, 1073, 1172
SalI GTCGAC 1 cut(s) 713
SaqAI TTAA 2 cut(s) 1167, 1228
SatI GCNGC 6 cut(s) 42, 105, 287, 576, 727, 901
Sau3AI GATC 7 cut(s) 84, 118, 235, 256, 355, 936, 1141
Sau96I GGNCC 4 cut(s) 148, 149, 586, 662
SchI GAGTC 2 cut(s) 72, 961
ScrFI CCNGG 2 cut(s) 131, 168
SduI GDGCHC 3 cut(s) 152, 329, 927
SexAI ACCWGGT 1 cut(s) 129
SfaNI GCATC 5 cut(s) 26, 526, 1068, 1107, 1186
SfcI CTRYAG 2 cut(s) 540, 1005
SgrAI CRCCGGYG 1 cut(s) 748
SmlI CTYRAG 4 cut(s) 80, 566, 653, 1121
SmoI CTYRAG 4 cut(s) 80, 566, 653, 1121
Sse9I AATT 5 cut(s) 90, 251, 446, 473, 784
SsiI CCGC 6 cut(s) 9, 42, 104, 287, 373, 927
SspI AATATT 1 cut(s) 808
SspMI CTAG 1 cut(s) 645
StyD4I CCNGG 2 cut(s) 129, 166
StyI CCWWGG 1 cut(s) 644
TaqI TCGA 5 cut(s) 65, 139, 259, 349, 714
TaqII GACCGA 1 cut(s) 567
TasI AATT 5 cut(s) 90, 251, 446, 473, 784
TatI WGTACW 1 cut(s) 1072
TauI GCSGC 3 cut(s) 44, 107, 289
TfiI GAWTC 3 cut(s) 385, 1018, 1039
Tru1I TTAA 2 cut(s) 1167, 1228
Tru9I TTAA 2 cut(s) 1167, 1228
TscAI CASTG 1 cut(s) 744
TseFI GTSAC 3 cut(s) 548, 953, 1027
TseI GCWGC 3 cut(s) 575, 726, 900
Tsp45I GTSAC 3 cut(s) 548, 953, 1027
TspDTI ATGAA 3 cut(s) 517, 698, 827
TspGWI ACGGA 1 cut(s) 611
TspRI CASTG 1 cut(s) 744
Van91I CCANNNNNTGG 1 cut(s) 195
XapI RAATTY 1 cut(s) 446
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 714
XspI CTAG 1 cut(s) 645
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.