Rmu_sc0031931.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031931.1
OG0000049
Physical Location & Seq
Forward (+)
16265 .. 17997
1733 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031931.1_g000003.1.cds

Sequence Viewer

Length: 915 bp
atgcatggcacttctactggtactgagcaggtccatgccggtttgagtgatagaaattgcttctccaattgggcttccatggtgccttcgaaaccaatatctaaattgtttgtcttggataccaagaaggtggagaggaaattatatccaagtttgaaggtttcggaaccgcttcttttgggatcgaaacgaaaagcagcctttgagcttacaaaggtggggaaacggtatctagctcttcctactcctgaattacaagtggatgaagatactactctgatgctgcagcacaagaatggtaaaattatagtttctccgaataagaagaaactggggcgtcctcgtggaagtaagaacaagcccaaagtcgctcgggtccttgaagtggataggcaagttaagaaacctaggaaatggaagagtaaggagaagattgtggatgtggttaacatggataaggatggggtggtgagggtacctgctgaagtggaaggcgaggtgcaggctgatgccatgaatggggagtctcctcccctcatgttgaatgtttcttcatttcttcttaaggtcgcaaaaatcaattcctctgaggatccattttactttctctacttcgggggttttagatttttgtttggaataagggggaggaaggaattgagggtttggagtcctcattctcatctccgcggctccaatcgccgcgactctcgccacctcctccgctggcgtctccccggtcagcatcgttgcttcttgccgccggaaaacgaatcgtcgggccttccttctcaaatgagtttgaggtcaaaggatagagcaatcaatagatttgaaaactatctggaggaggtcgaagaagaacggaagaacatatccatcagtagaactgtagaagcaaatttgggattctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

304

Amino Acids

34.69

Weight (kDa)

10.02

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000049)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09850 FvH4_2g12512 FvH4_2g19830 FvH4_2g21281 FvH4_2g30300 FvH4_3g04012 FvH4_3g12601 FvH4_3g25620 FvH4_3g28881 FvH4_3g29932 FvH4_4g12651 FvH4_5g27100 FvH4_6g03011 FvH4_6g10710 FvH4_6g10711 FvH4_6g19991 FvH4_6g25461 FvH4_6g32661 FvH4_7g16371
rosa_chinensis RchiOBHm_Chr1g0347111 RchiOBHm_Chr1g0350781 RchiOBHm_Chr1g0350971 RchiOBHm_Chr2g0123951 RchiOBHm_Chr4g0397591 RchiOBHm_Chr5g0032121 RchiOBHm_Chr6g0265951
rosa_laevigata RLG00000000709 RLG00000001093 RLG00000001244 RLG00000002381 RLG00000003581 RLG00000003584 RLG00000004011 RLG00000004587 RLG00000005734 RLG00000007804 RLG00000008145 RLG00000008422 RLG00000008949 RLG00000009240 RLG00000009334 RLG00000009773 RLG00000010531 RLG00000012000 RLG00000012913 RLG00000013188 RLG00000013289 RLG00000013302 RLG00000013943 RLG00000016032 RLG00000016277 RLG00000016479 RLG00000017591 RLG00000017899 RLG00000018452 RLG00000018455 RLG00000019343 RLG00000021649 RLG00000023222 RLG00000023677 RLG00000024058 RLG00000024433 RLG00000026719 RLG00000027778 RLG00000028367 RLG00000028761 RLG00000029079 RLG00000030238 RLG00000030452 RLG00000030719 RLG00000030834 RLG00000031739 RLG00000032099 RLG00000033644 RLG00000033713 RLG00000034081 RLG00000035108 RLG00000035250 RLG00000035711 RLG00000036556 RLG00000036747
rosa_multiflora Rmu_co8042282.1_g000001 Rmu_co8251111.1_g000001 Rmu_co8268445.1_g000001 Rmu_co8273215.1_g000001 Rmu_co8469153.1_g000002 Rmu_sc0000035.1_g000023 Rmu_sc0000092.1_g000002 Rmu_sc0000166.1_g000008 Rmu_sc0000260.1_g000017 Rmu_sc0000317.1_g000014 Rmu_sc0000470.1_g000023 Rmu_sc0000533.1_g000060 Rmu_sc0000539.1_g000011 Rmu_sc0000546.1_g000022 Rmu_sc0000571.1_g000022 Rmu_sc0000610.1_g000019 Rmu_sc0000706.1_g000038 Rmu_sc0000843.1_g000005 Rmu_sc0000882.1_g000008 Rmu_sc0000928.1_g000014 Rmu_sc0000928.1_g000015 Rmu_sc0001140.1_g000009 Rmu_sc0001161.1_g000015 Rmu_sc0001179.1_g000041 Rmu_sc0001296.1_g000014 Rmu_sc0001373.1_g000023 Rmu_sc0001433.1_g000015 Rmu_sc0001519.1_g000009 Rmu_sc0001878.1_g000011 Rmu_sc0002112.1_g000014 Rmu_sc0002141.1_g000030 Rmu_sc0002148.1_g000029 Rmu_sc0002156.1_g000014 Rmu_sc0002199.1_g000007 Rmu_sc0002586.1_g000033 Rmu_sc0002620.1_g000008 Rmu_sc0002646.1_g000010 Rmu_sc0002800.1_g000026 Rmu_sc0002921.1_g000001 Rmu_sc0002964.1_g000009 Rmu_sc0002989.1_g000009 Rmu_sc0003133.1_g000002 Rmu_sc0003238.1_g000030 Rmu_sc0003314.1_g000011 Rmu_sc0003314.1_g000012 Rmu_sc0003314.1_g000028 Rmu_sc0003458.1_g000003 Rmu_sc0003499.1_g000034 Rmu_sc0003610.1_g000040 Rmu_sc0003859.1_g000006 Rmu_sc0003971.1_g000002 Rmu_sc0004161.1_g000006 Rmu_sc0004250.1_g000023 Rmu_sc0004467.1_g000071 Rmu_sc0004498.1_g000004 Rmu_sc0004521.1_g000024 Rmu_sc0004529.1_g000030 Rmu_sc0004547.1_g000009 Rmu_sc0004835.1_g000034 Rmu_sc0004944.1_g000012 Rmu_sc0005030.1_g000005 Rmu_sc0005030.1_g000006 Rmu_sc0005137.1_g000033 Rmu_sc0005294.1_g000013 Rmu_sc0005416.1_g000020 Rmu_sc0005426.1_g000010 Rmu_sc0005432.1_g000001 Rmu_sc0005450.1_g000020 Rmu_sc0005566.1_g000008 Rmu_sc0005693.1_g000020 Rmu_sc0005992.1_g000007 Rmu_sc0006007.1_g000001 Rmu_sc0006016.1_g000017 Rmu_sc0006016.1_g000018 Rmu_sc0006147.1_g000009 Rmu_sc0006536.1_g000032 Rmu_sc0006536.1_g000033 Rmu_sc0006572.1_g000006 Rmu_sc0007474.1_g000013 Rmu_sc0007490.1_g000008 Rmu_sc0007490.1_g000009 Rmu_sc0007618.1_g000003 Rmu_sc0007753.1_g000021 Rmu_sc0008039.1_g000001 Rmu_sc0008044.1_g000008 Rmu_sc0008155.1_g000003 Rmu_sc0008308.1_g000006 Rmu_sc0008308.1_g000017 Rmu_sc0008360.1_g000006 Rmu_sc0008380.1_g000015 Rmu_sc0008596.1_g000002 Rmu_sc0008596.1_g000003 Rmu_sc0008629.1_g000013 Rmu_sc0008991.1_g000011 Rmu_sc0009015.1_g000004 Rmu_sc0009015.1_g000005 Rmu_sc0009360.1_g000050 Rmu_sc0009386.1_g000009 Rmu_sc0009410.1_g000003 Rmu_sc0009410.1_g000006 Rmu_sc0009609.1_g000001 Rmu_sc0010317.1_g000003 Rmu_sc0010871.1_g000016 Rmu_sc0010999.1_g000018 Rmu_sc0011019.1_g000009 Rmu_sc0011343.1_g000014 Rmu_sc0011578.1_g000019 Rmu_sc0011781.1_g000012 Rmu_sc0011921.1_g000008 Rmu_sc0012005.1_g000001 Rmu_sc0012179.1_g000006 Rmu_sc0012211.1_g000007 Rmu_sc0012220.1_g000002 Rmu_sc0012742.1_g000001 Rmu_sc0013620.1_g000004 Rmu_sc0014003.1_g000007 Rmu_sc0014203.1_g000024 Rmu_sc0014612.1_g000004 Rmu_sc0014667.1_g000006 Rmu_sc0015359.1_g000002 Rmu_sc0016526.1_g000003 Rmu_sc0017253.1_g000008 Rmu_sc0017394.1_g000005 Rmu_sc0017394.1_g000006 Rmu_sc0018840.1_g000001 Rmu_sc0019315.1_g000001 Rmu_sc0022276.1_g000002 Rmu_sc0024289.1_g000001 Rmu_sc0024918.1_g000004 Rmu_sc0026424.1_g000001 Rmu_sc0026425.1_g000001 Rmu_sc0030616.1_g000001 Rmu_sc0030617.1_g000001 Rmu_sc0031931.1_g000003 Rmu_sc0034665.1_g000001 Rmu_sc0035393.1_g000001 Rmu_ssc0000162.1_g000015 Rmu_ssc0000255.1_g000060 Rmu_ssc0000409.1_g000012
rosa_roxburghii Rroxscaffold_1G00006160 Rroxscaffold_2G00084140 Rroxscaffold_2G00109070 Rroxscaffold_2G00136190 Rroxscaffold_2G00136200 Rroxscaffold_3G00237880 Rroxscaffold_3G00250500 Rroxscaffold_3G00272860 Rroxscaffold_4G00283710 Rroxscaffold_4G00308190 Rroxscaffold_5G00334250 Rroxscaffold_5G00339840 Rroxscaffold_5G00380790 Rroxscaffold_7G00177140 Rroxscaffold_7G00186880 Rroxscaffold_7G00201080
rosa_rugosa Rorug01G0002600 Rorug01G0159800.1 Rorug01G0164900 Rorug01G0176500 Rorug01G0185400 Rorug01G0223500 Rorug01G0231900 Rorug01G0251700 Rorug01G0283600 Rorug01G0309600 Rorug01G0333600 Rorug01G0478500 Rorug01G0478700 Rorug01G0483600 Rorug02G0000400 Rorug02G0025400 Rorug02G0025500 Rorug02G0160600 Rorug02G0179800 Rorug02G0221000 Rorug02G0222000 Rorug02G0239900 Rorug02G0291000 Rorug02G0292800 Rorug02G0299400 Rorug02G0361300 Rorug02G0382000 Rorug02G0438400 Rorug02G0438400 Rorug02G0463000 Rorug02G0599300 Rorug03G0085500 Rorug03G0143300 Rorug03G0150200 Rorug03G0214500 Rorug03G0301800 Rorug03G0304100 Rorug03G0304200 Rorug03G0318900 Rorug03G0342400 Rorug03G0363300.1 Rorug04G0006400 Rorug04G0026200 Rorug04G0185500 Rorug04G0185600 Rorug04G0242600 Rorug04G0294300 Rorug04G0322000 Rorug04G0380900 Rorug05G0050300 Rorug05G0050300 Rorug05G0086800 Rorug05G0106900 Rorug05G0166700 Rorug05G0220300 Rorug05G0237400 Rorug05G0296300 Rorug05G0313400 Rorug05G0323000 Rorug05G0347200 Rorug05G0363800 Rorug05G0413500 Rorug05G0440900 Rorug05G0498500 Rorug05G0576300 Rorug06G0025600 Rorug06G0029800 Rorug06G0045700 Rorug06G0087400 Rorug06G0087600 Rorug06G0108200 Rorug06G0110200 Rorug06G0129900 Rorug06G0129900 Rorug06G0133800 Rorug06G0141200 Rorug06G0219200 Rorug06G0268900 Rorug06G0269000 Rorug06G0291100 Rorug06G0479100 Rorug06G0479200 Rorug06G0511800 Rorug07G0028800.1 Rorug07G0052500 Rorug07G0071900 Rorug07G0076600 Rorug07G0079900 Rorug07G0085200 Rorug07G0302400 Rorug07G0303700 Rorug07G0318000
rosa_samantha Rh1AG194500 Rh1AG194600 Rh1AG354700 Rh1BG147200 Rh1BG169000 Rh1BG212500 Rh1BG241800 Rh1CG179300 Rh2AG232000 Rh2BG307200 Rh2BG352400 Rh2BG563400 Rh2CG200100 Rh2CG285300 Rh2CG331100 Rh2CG533700 Rh2CG574800 Rh2CG650600 Rh2CG650700 Rh2DG212200 Rh3BG142200 Rh3BG294100 Rh3BG300500 Rh3CG143500 Rh3DG143400 Rh4AG079100 Rh4AG125800 Rh4BG119600 Rh4BG187000 Rh4BG248400 Rh4CG036500 Rh4CG084700 Rh4CG134000 Rh4CG198900 Rh5AG384400 Rh5BG212700 Rh5CG235900 Rh5CG292600 Rh5CG401000 Rh5CG502100 Rh5CG506700 Rh5DG020900 Rh5DG269500 Rh5DG330300 Rh5DG388800 Rh6AG031600 Rh6AG257800 Rh6AG375600 Rh6BG338400 Rh6BG418300 Rh6CG280900 Rh6DG411200 Rh7AG075900 Rh7BG073500 Rh7BG088700 Rh7BG210200 Rh7BG260400 Rh7BG269600 Rh7BG270600 Rh7BG459100 Rh7BG459200 Rh7CG258100
rosa_wichuraiana Rw0G014160 Rw0G019160 Rw1G007800 Rw1G013530 Rw1G036200 Rw2G016380 Rw2G022170 Rw2G036380 Rw3G001880 Rw4G026250 Rw5G017280 Rw5G045990 Rw6G019190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 19, 487
Acc65I GGTACC 1 cut(s) 475
AccB1I GGYRCC 2 cut(s) 82, 475
AccII CGCG 2 cut(s) 690, 705
AciI CCGC 6 cut(s) 170, 688, 690, 703, 724, 761
AclWI GGATC 3 cut(s) 190, 587, 600
AcsI RAATTY 1 cut(s) 901
AcuI CTGAAG 1 cut(s) 504
AcyI GRCGYC 2 cut(s) 337, 730
AfaI GTAC 2 cut(s) 22, 477
AfiI CCNNNNNNNGG 2 cut(s) 385, 519
AflII CTTAAG 1 cut(s) 563
AgsI TTSAA 4 cut(s) 157, 383, 544, 836
AluBI AGCT 2 cut(s) 208, 236
AluI AGCT 2 cut(s) 208, 236
Alw26I GTCTC 2 cut(s) 531, 737
AlwI GGATC 3 cut(s) 190, 587, 600
Ama87I CYCGRG 1 cut(s) 372
AoxI GGCC 1 cut(s) 781
ApeKI GCWGC 3 cut(s) 197, 283, 286
ApoI RAATTY 1 cut(s) 901
Asp700I GAANNNNTTC 1 cut(s) 171
Asp718I GGTACC 1 cut(s) 475
AspA2I CCTAGG 1 cut(s) 407
AspS9I GGNCC 3 cut(s) 31, 376, 781
AsuC2I CCSGG 1 cut(s) 738
AsuHPI GGTGA 1 cut(s) 481
AsuII TTCGAA 1 cut(s) 89
AvaI CYCGRG 1 cut(s) 372
AvaII GGWCC 2 cut(s) 31, 376
AvrII CCTAGG 1 cut(s) 407
BamHI GGATCC 1 cut(s) 592
BanI GGYRCC 2 cut(s) 82, 475
BauI CACGAG 1 cut(s) 342
BbvI GCAGC 3 cut(s) 209, 270, 298
BccI CCATC 2 cut(s) 455, 887
BciVI GTATCC 1 cut(s) 112
BcnI CCSGG 1 cut(s) 738
BcoDI GTCTC 2 cut(s) 531, 737
BfaI CTAG 3 cut(s) 233, 408, 913
BfmI CTRYAG 2 cut(s) 284, 891
BfrI CTTAAG 1 cut(s) 563
BfuAI ACCTGC 2 cut(s) 19, 487
BfuI GTATCC 1 cut(s) 112
BisI GCNGC 6 cut(s) 198, 284, 287, 691, 703, 761
BlnI CCTAGG 1 cut(s) 407
BlsI GCNGC 6 cut(s) 199, 285, 288, 692, 704, 762
Bme1390I CCNGG 1 cut(s) 738
Bme18I GGWCC 2 cut(s) 31, 376
BmeT110I CYCGRG 1 cut(s) 372
BmgT120I GGNCC 3 cut(s) 31, 376, 781
BmiI GGNNCC 6 cut(s) 84, 168, 377, 477, 594, 694
BmrFI CCNGG 1 cut(s) 738
BmrI ACTGGG 1 cut(s) 341
BmsI GCATC 3 cut(s) 270, 499, 754
BmuI ACTGGG 1 cut(s) 341
BpmI CTGGAG 1 cut(s) 866
Bpu14I TTCGAA 1 cut(s) 89
BpuMI CCSGG 1 cut(s) 738
BsaHI GRCGYC 2 cut(s) 337, 730
BsaJI CCNNGG 4 cut(s) 78, 407, 688, 736
Bsc4I CCNNNNNNNGG 2 cut(s) 385, 519
Bse118I RCCGGY 1 cut(s) 38
Bse1I ACTGG 2 cut(s) 22, 336
BseDI CCNNGG 4 cut(s) 78, 407, 688, 736
BseGI GGATG 3 cut(s) 268, 445, 466
BseLI CCNNNNNNNGG 2 cut(s) 385, 519
BseMII CTCAG 2 cut(s) 15, 579
BseNI ACTGG 2 cut(s) 22, 336
BseRI GAGGAG 3 cut(s) 519, 710, 863
BseXI GCAGC 3 cut(s) 209, 270, 298
BsgI GTGCAG 1 cut(s) 521
Bsh1236I CGCG 2 cut(s) 690, 705
BshFI GGCC 1 cut(s) 783
BshNI GGYRCC 2 cut(s) 82, 475
BsiHKCI CYCGRG 1 cut(s) 372
BsiSI CCGG 3 cut(s) 39, 738, 764
BslI CCNNNNNNNGG 2 cut(s) 385, 519
BsmAI GTCTC 2 cut(s) 531, 737
BsmBI CGTCTC 1 cut(s) 737
BsnI GGCC 1 cut(s) 783
BsoBI CYCGRG 1 cut(s) 372
Bsp119I TTCGAA 1 cut(s) 89
Bsp143I GATC 2 cut(s) 182, 592
Bsp19I CCATGG 1 cut(s) 78
BspACI CCGC 6 cut(s) 170, 688, 690, 703, 724, 761
BspANI GGCC 1 cut(s) 783
BspCNI CTCAG 2 cut(s) 16, 580
BspFNI CGCG 2 cut(s) 690, 705
BspLI GGNNCC 6 cut(s) 84, 168, 377, 477, 594, 694
BspMAI CTGCAG 1 cut(s) 288
BspMI ACCTGC 2 cut(s) 19, 487
BspPI GGATC 3 cut(s) 190, 587, 600
BspQI GCTCTTC 1 cut(s) 243
BspT104I TTCGAA 1 cut(s) 89
BspT107I GGYRCC 2 cut(s) 82, 475
BspTI CTTAAG 1 cut(s) 563
BsrFI RCCGGY 1 cut(s) 38
BsrI ACTGG 2 cut(s) 22, 336
BssAI RCCGGY 1 cut(s) 38
BssECI CCNNGG 4 cut(s) 78, 407, 688, 736
BssMI GATC 2 cut(s) 182, 592
BssNI GRCGYC 2 cut(s) 337, 730
BssSI CACGAG 1 cut(s) 342
BssT1I CCWWGG 2 cut(s) 78, 407
Bst2BI CACGAG 1 cut(s) 342
Bst4CI ACNGT 2 cut(s) 228, 892
Bst6I CTCTTC 2 cut(s) 243, 413
BstACI GRCGYC 2 cut(s) 337, 730
BstAFI CTTAAG 1 cut(s) 563
BstBI TTCGAA 1 cut(s) 89
BstC8I GCNNGC 2 cut(s) 504, 728
BstDEI CTNAG 2 cut(s) 24, 588
BstDSI CCRYGG 2 cut(s) 78, 688
BstF5I GGATG 3 cut(s) 268, 445, 466
BstFNI CGCG 2 cut(s) 690, 705
BstKTI GATC 2 cut(s) 185, 595
BstMAI GTCTC 2 cut(s) 531, 737
BstMBI GATC 2 cut(s) 182, 592
BstMWI GCNNNNNNNGC 2 cut(s) 699, 711
BstSCI CCNGG 1 cut(s) 736
BstSFI CTRYAG 2 cut(s) 284, 891
BstUI CGCG 2 cut(s) 690, 705
BstV1I GCAGC 3 cut(s) 209, 270, 298
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 1 cut(s) 130
BstYI RGATCY 1 cut(s) 592
BsuI GTATCC 1 cut(s) 112
BsuRI GGCC 1 cut(s) 783
BtgI CCRYGG 2 cut(s) 78, 688
BtsCI GGATG 3 cut(s) 268, 445, 466
BveI ACCTGC 2 cut(s) 19, 487
Cac8I GCNNGC 2 cut(s) 504, 728
Cfr10I RCCGGY 1 cut(s) 38
Cfr13I GGNCC 3 cut(s) 31, 376, 781
Cfr42I CCGCGG 1 cut(s) 691
CseI GACGC 2 cut(s) 326, 719
Csp6I GTAC 2 cut(s) 21, 476
CviAII CATG 6 cut(s) 5, 35, 79, 451, 514, 538
CviJI RGCY 8 cut(s) 74, 200, 208, 236, 361, 506, 693, 783
CviKI_1 RGCY 8 cut(s) 74, 200, 208, 236, 361, 506, 693, 783
CviQI GTAC 2 cut(s) 21, 476
DdeI CTNAG 2 cut(s) 24, 588
DpnI GATC 2 cut(s) 184, 594
DpnII GATC 2 cut(s) 182, 592
Eam1104I CTCTTC 2 cut(s) 243, 413
EarI CTCTTC 2 cut(s) 243, 413
Eco130I CCWWGG 2 cut(s) 78, 407
Eco47I GGWCC 2 cut(s) 31, 376
Eco57I CTGAAG 1 cut(s) 504
Eco88I CYCGRG 1 cut(s) 372
EcoO109I RGGNCCY 1 cut(s) 376
EcoT14I CCWWGG 2 cut(s) 78, 407
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 78, 407
Esp3I CGTCTC 1 cut(s) 737
FaeI CATG 6 cut(s) 8, 38, 82, 454, 517, 541
FaiI YATR 9 cut(s) 6, 36, 80, 145, 308, 452, 515, 539, 875
FatI CATG 6 cut(s) 4, 34, 78, 450, 513, 537
Fnu4HI GCNGC 6 cut(s) 198, 284, 287, 691, 703, 761
FokI GGATG 3 cut(s) 275, 452, 473
Fsp4HI GCNGC 6 cut(s) 198, 284, 287, 691, 703, 761
FspBI CTAG 3 cut(s) 233, 408, 913
GluI GCNGC 6 cut(s) 198, 284, 287, 691, 703, 761
GsuI CTGGAG 1 cut(s) 866
HaeIII GGCC 1 cut(s) 783
HapII CCGG 3 cut(s) 39, 738, 764
HgaI GACGC 2 cut(s) 326, 719
Hin1I GRCGYC 2 cut(s) 337, 730
Hin1II CATG 6 cut(s) 8, 38, 82, 454, 517, 541
HincII GTYRAC 1 cut(s) 448
HindII GTYRAC 1 cut(s) 448
HinfI GANTC 5 cut(s) 524, 670, 707, 773, 909
HpaI GTTAAC 1 cut(s) 448
HpaII CCGG 3 cut(s) 39, 738, 764
HphI GGTGA 1 cut(s) 481
Hpy166II GTNNAC 1 cut(s) 448
Hpy188I TCNGA 4 cut(s) 166, 279, 318, 589
Hpy188III TCNNGA 2 cut(s) 248, 845
Hpy8I GTNNAC 1 cut(s) 448
Hpy99I CGWCG 1 cut(s) 781
HpyAV CCTTC 7 cut(s) 96, 121, 151, 485, 646, 794, 798
HpyCH4III ACNGT 2 cut(s) 228, 892
HpyCH4V TGCA 3 cut(s) 4, 286, 502
HpyF10VI GCNNNNNNNGC 2 cut(s) 699, 711
HpyF3I CTNAG 2 cut(s) 24, 588
Hsp92I GRCGYC 2 cut(s) 337, 730
Hsp92II CATG 6 cut(s) 8, 38, 82, 454, 517, 541
KpnI GGTACC 1 cut(s) 479
KspAI GTTAAC 1 cut(s) 448
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 2 cut(s) 182, 592
LguI GCTCTTC 1 cut(s) 243
LmnI GCTCC 1 cut(s) 698
Lsp1109I GCAGC 3 cut(s) 209, 270, 298
LweI GCATC 3 cut(s) 270, 499, 754
MaeI CTAG 3 cut(s) 233, 408, 913
MalI GATC 2 cut(s) 184, 594
MboI GATC 2 cut(s) 182, 592
MfeI CAATTG 1 cut(s) 67
MflI RGATCY 1 cut(s) 592
MluCI AATT 9 cut(s) 55, 67, 104, 140, 251, 303, 580, 656, 901
MlyI GAGTC 3 cut(s) 533, 679, 701
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 171
MseI TTAA 3 cut(s) 399, 447, 564
MslI CAYNNNNRTG 1 cut(s) 294
MspA1I CMGCKG 2 cut(s) 690, 726
MspCI CTTAAG 1 cut(s) 563
MspI CCGG 3 cut(s) 39, 738, 764
MspR9I CCNGG 1 cut(s) 738
MunI CAATTG 1 cut(s) 67
MvnI CGCG 2 cut(s) 690, 705
MwoI GCNNNNNNNGC 2 cut(s) 699, 711
NciI CCSGG 1 cut(s) 738
NcoI CCATGG 1 cut(s) 78
NdeII GATC 2 cut(s) 182, 592
NlaIII CATG 6 cut(s) 8, 38, 82, 454, 517, 541
NlaIV GGNNCC 6 cut(s) 84, 168, 377, 477, 594, 694
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 89
PciSI GCTCTTC 1 cut(s) 243
PdmI GAANNNNTTC 1 cut(s) 171
PfeI GAWTC 2 cut(s) 773, 909
PkrI GCNGC 6 cut(s) 199, 285, 288, 692, 704, 762
PleI GAGTC 3 cut(s) 532, 678, 701
PpsI GAGTC 3 cut(s) 532, 678, 701
PpuMI RGGWCCY 1 cut(s) 376
Psp5II RGGWCCY 1 cut(s) 376
PspN4I GGNNCC 6 cut(s) 84, 168, 377, 477, 594, 694
PspPI GGNCC 3 cut(s) 31, 376, 781
PspPPI RGGWCCY 1 cut(s) 376
PstI CTGCAG 1 cut(s) 288
PsuI RGATCY 1 cut(s) 592
RsaI GTAC 2 cut(s) 22, 477
RsaNI GTAC 2 cut(s) 21, 476
RseI CAYNNNNRTG 1 cut(s) 294
SacII CCGCGG 1 cut(s) 691
SapI GCTCTTC 1 cut(s) 243
SaqAI TTAA 3 cut(s) 399, 447, 564
SatI GCNGC 6 cut(s) 198, 284, 287, 691, 703, 761
Sau3AI GATC 2 cut(s) 182, 592
Sau96I GGNCC 3 cut(s) 31, 376, 781
SchI GAGTC 3 cut(s) 533, 679, 701
ScrFI CCNGG 1 cut(s) 738
SfaNI GCATC 3 cut(s) 270, 499, 754
SfcI CTRYAG 2 cut(s) 284, 891
Sfr303I CCGCGG 1 cut(s) 691
SfuI TTCGAA 1 cut(s) 89
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 2 cut(s) 31, 376
SmiMI CAYNNNNRTG 1 cut(s) 294
SmlI CTYRAG 1 cut(s) 563
SmoI CTYRAG 1 cut(s) 563
Sse9I AATT 9 cut(s) 55, 67, 104, 140, 251, 303, 580, 656, 901
SsiI CCGC 6 cut(s) 170, 688, 690, 703, 724, 761
SspMI CTAG 3 cut(s) 233, 408, 913
StyD4I CCNGG 1 cut(s) 736
StyI CCWWGG 2 cut(s) 78, 407
TaaI ACNGT 2 cut(s) 228, 892
TaqI TCGA 3 cut(s) 89, 185, 855
TasI AATT 9 cut(s) 55, 67, 104, 140, 251, 303, 580, 656, 901
TauI GCSGC 3 cut(s) 693, 705, 763
TfiI GAWTC 2 cut(s) 773, 909
Tru1I TTAA 3 cut(s) 399, 447, 564
Tru9I TTAA 3 cut(s) 399, 447, 564
TseI GCWGC 3 cut(s) 197, 283, 286
TspDTI ATGAA 3 cut(s) 279, 530, 543
TspGWI ACGGA 1 cut(s) 880
Vha464I CTTAAG 1 cut(s) 563
VpaK11BI GGWCC 2 cut(s) 31, 376
XapI RAATTY 1 cut(s) 901
XmaJI CCTAGG 1 cut(s) 407
XmnI GAANNNNTTC 1 cut(s) 171
XspI CTAG 3 cut(s) 233, 408, 913
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.