Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007506

Physical Location & Seq

Genomic Coordinates Reverse (-)

11119190 .. 11120987

Gene Structure 1798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G104500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGCAATGGCTCAGTTTTGCTTCTCTGCTTCCTTGTGTTACAATTCTTGCTTCCCAAGAAATGCAACTCTTTCTCTCACACTTTGTAAGCCACTGAAAAATGGGGTCTTTAGCTTCAACACAATCCAATGTTGTACGAGCCAGAGGGAGGCCATTGAACATTCTGGTAATGGGTTGGCTAGTTTTCCTGAAAAGCACTTGCATAGGAAGTCAGCTACTAGTACTAAAGCACCCCCTCCTAGACCGCGCCGGATAATCTTGGTTCGACACGGGCAGAGTGAAGGAAATGTAGATGAGAGTGTTTATACAAGAGTTTCTGATCCAAAGATTGGACTGACAGAGAAAGGGTTGGAGGATGCTGAGCAATGTGGGAAGAGGATCAGGGAAATGATTGAGAAAGACAAAGTGCATAATTGGAAGGTCTACTTTTATGTGTCCCCTTATAGAAGGGGAGTTGAAACTCTAAAGGGTTTAGGAAGAGCATTTGAGCGCTCAAGAATTGCTGGCATGAGAGAGGAGCCTCGGCTAAGAGAGCAAGACTTCGGGAATTTTCAGGACAGGGAGAAGATGAGAGTAGAGAAAGCCATTCGAATGCTTTACGGTCGCTTCTTTTACCGGTTTCCTAATGGGGAATCTGCAGCGGATGTTTATGACAGGATTACAGGATTCAGAGAAACATTGAGAGCAGATATCGATATAGGTCGATTTCAGCCACCCGGGGAGAGAAATCCAAACATTAACTTGGTAATAGTTTCACATGGCCTAACACTGAGAGTGTTTCTCATGAGATGGTACAAATGGACAGTGGAGCAATTTGAGAGGCTGAATAACTTTGGCAATGGAGGAGTGGTTGTTATGGAAAGAGGTTATGGTGGAAGGTACAGCTTGTTAGTGCACCACACAGAAGAAGAGCTAAGGGAATTTGGATTGACAGATGAAATGTTAAGTGATCAGGAATGGCAAAAATATGCAAAACCTGGGGAGCTGAACTATGATTGCCCAACACTAAATTCCTTCTTCTCGCACTTCGCCAACAATTGTGGTGATGAAAATGAAAACAAAATCAACAGCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

His_Phos_1

Protein Analysis

359

Amino Acids

41.36

Weight (kDa)

8.76

Isoelectric Point (pI)

36.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007506)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g02940
malus_domestica	MD06G1088600.v1.1 MD14G1109700.v1.1
prunus_persica	Prupe.5G104500_v2.0.a1 Prupe.5G104500_v2.0.a1
pyrus_communis	pycom06g08450 pycom14g10380
rosa_chinensis	RchiOBHm_Chr7g0196931 RchiOBHm_Chr7g0196941
rosa_laevigata	RLG00000003978 RLG00000003979
rosa_multiflora	Rmu_sc0001083.1_g000007 Rmu_sc0001083.1_g000008
rosa_roxburghii	Rroxscaffold_3G00258820
rosa_rugosa	Rorug07G0036800
rosa_samantha	Rh7AG161200 Rh7AG161300 Rh7BG163300 Rh7BG163400 Rh7CG169400 Rh7CG169500 Rh7DG162700 Rh7DG162800
rosa_wichuraiana	Rw7G014100 Rw7G014110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	329
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	1 cut(s)	247
AciI	CCGC	2 cut(s)	245, 641
AclWI	GGATC	2 cut(s)	314, 386
AcsI	RAATTY	3 cut(s)	547, 920, 1009
AfaI	GTAC	4 cut(s)	136, 223, 794, 881
AfeI	AGCGCT	1 cut(s)	491
AfiI	CCNNNNNNNGG	2 cut(s)	148, 329
AgeI	ACCGGT	1 cut(s)	615
AgsI	TTSAA	3 cut(s)	118, 158, 458
AhlI	ACTAGT	1 cut(s)	218
AjnI	CCWGG	1 cut(s)	976
AjuI	GAANNNNNNNTTGG	2 cut(s)	994, 1026
AluBI	AGCT	6 cut(s)	114, 215, 885, 913, 985, 1074
AluI	AGCT	6 cut(s)	114, 215, 885, 913, 985, 1074
Alw21I	GWGCWC	1 cut(s)	897
Alw44I	GTGCAC	1 cut(s)	893
AlwI	GGATC	2 cut(s)	314, 386
Ama87I	CYCGRG	1 cut(s)	716
Aor51HI	AGCGCT	1 cut(s)	491
AoxI	GGCC	2 cut(s)	150, 760
ApaLI	GTGCAC	1 cut(s)	893
ApeKI	GCWGC	2 cut(s)	638, 1071
ApoI	RAATTY	3 cut(s)	547, 920, 1009
AsiGI	ACCGGT	1 cut(s)	615
AspLEI	GCGC	2 cut(s)	249, 492
AsuC2I	CCSGG	2 cut(s)	717, 718
AsuHPI	GGTGA	1 cut(s)	1055
AsuII	TTCGAA	1 cut(s)	589
AvaI	CYCGRG	1 cut(s)	716
BaeGI	GKGCMC	1 cut(s)	897
Bbv12I	GWGCWC	1 cut(s)	897
BbvI	GCAGC	1 cut(s)	650
BccI	CCATC	1 cut(s)	783
BciT130I	CCWGG	1 cut(s)	978
BclI	TGATCA	1 cut(s)	949
BcnI	CCSGG	2 cut(s)	717, 718
BcuI	ACTAGT	1 cut(s)	218
BfaI	CTAG	4 cut(s)	180, 219, 240, 1075
BfmI	CTRYAG	1 cut(s)	636
BfoI	RGCGCY	1 cut(s)	493
BisI	GCNGC	2 cut(s)	639, 1072
BlpI	GCTNAGC	1 cut(s)	360
BlsI	GCNGC	2 cut(s)	640, 1073
BmcAI	AGTACT	1 cut(s)	223
Bme1390I	CCNGG	3 cut(s)	717, 718, 978
BmeT110I	CYCGRG	1 cut(s)	716
BmiI	GGNNCC	1 cut(s)	519
BmrFI	CCNGG	3 cut(s)	717, 718, 978
BmsI	GCATC	1 cut(s)	346
BplI	GAGNNNNNCTC	2 cut(s)	765, 797
Bpu10I	CCTNAGC	1 cut(s)	914
Bpu1102I	GCTNAGC	1 cut(s)	360
Bpu14I	TTCGAA	1 cut(s)	589
BpuEI	CTTGAG	1 cut(s)	478
BpuMI	CCSGG	2 cut(s)	717, 718
Bsa29I	ATCGAT	1 cut(s)	693
BsaJI	CCNNGG	4 cut(s)	521, 716, 717, 977
BsaWI	WCCGGW	1 cut(s)	615
BsaXI	ACNNNNNCTCC	4 cut(s)	834, 837, 864, 867
Bsc4I	CCNNNNNNNGG	2 cut(s)	148, 329
Bse118I	RCCGGY	1 cut(s)	615
Bse3DI	GCAATG	3 cut(s)	12, 371, 844
BseBI	CCWGG	1 cut(s)	978
BseCI	ATCGAT	1 cut(s)	693
BseDI	CCNNGG	4 cut(s)	521, 716, 717, 977
BseGI	GGATG	2 cut(s)	361, 649
BseLI	CCNNNNNNNGG	2 cut(s)	148, 329
BseMI	GCAATG	3 cut(s)	12, 371, 844
BseMII	CTCAG	3 cut(s)	26, 351, 761
BseRI	GAGGAG	2 cut(s)	530, 858
BseSI	GKGCMC	1 cut(s)	897
BseXI	GCAGC	1 cut(s)	650
Bsh1236I	CGCG	1 cut(s)	247
Bsh1285I	CGRYCG	1 cut(s)	604
BshFI	GGCC	2 cut(s)	152, 762
BshTI	ACCGGT	1 cut(s)	615
BshVI	ATCGAT	1 cut(s)	693
BsiEI	CGRYCG	1 cut(s)	604
BsiHKAI	GWGCWC	1 cut(s)	897
BsiHKCI	CYCGRG	1 cut(s)	716
BsiSI	CCGG	3 cut(s)	250, 616, 717
BslFI	GGGAC	1 cut(s)	421
BslI	CCNNNNNNNGG	2 cut(s)	148, 329
BsmFI	GGGAC	1 cut(s)	421
BsmI	GAATGC	1 cut(s)	597
BsnI	GGCC	2 cut(s)	152, 762
BsoBI	CYCGRG	1 cut(s)	716
Bsp119I	TTCGAA	1 cut(s)	589
Bsp1286I	GDGCHC	1 cut(s)	897
Bsp143I	GATC	3 cut(s)	319, 378, 949
Bsp1720I	GCTNAGC	1 cut(s)	360
BspACI	CCGC	2 cut(s)	245, 641
BspANI	GGCC	2 cut(s)	152, 762
BspCNI	CTCAG	3 cut(s)	25, 352, 762
BspDI	ATCGAT	1 cut(s)	693
BspFNI	CGCG	1 cut(s)	247
BspHI	TCATGA	1 cut(s)	783
BspLI	GGNNCC	1 cut(s)	519
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	2 cut(s)	314, 386
BspQI	GCTCTTC	2 cut(s)	472, 903
BspT104I	TTCGAA	1 cut(s)	589
BsrDI	GCAATG	3 cut(s)	12, 371, 844
BsrFI	RCCGGY	1 cut(s)	615
BssAI	RCCGGY	1 cut(s)	615
BssECI	CCNNGG	4 cut(s)	521, 716, 717, 977
BssMI	GATC	3 cut(s)	319, 378, 949
Bst2UI	CCWGG	1 cut(s)	978
Bst4CI	ACNGT	2 cut(s)	602, 805
Bst6I	CTCTTC	3 cut(s)	368, 472, 903
BstBI	TTCGAA	1 cut(s)	589
BstC8I	GCNNGC	1 cut(s)	505
BstDEI	CTNAG	5 cut(s)	12, 360, 527, 770, 914
BstF5I	GGATG	2 cut(s)	361, 649
BstFNI	CGCG	1 cut(s)	247
BstH2I	RGCGCY	1 cut(s)	493
BstHHI	GCGC	2 cut(s)	249, 492
BstKTI	GATC	3 cut(s)	322, 381, 952
BstMBI	GATC	3 cut(s)	319, 378, 949
BstMCI	CGRYCG	1 cut(s)	604
BstMWI	GCNNNNNNNGC	1 cut(s)	532
BstNI	CCWGG	1 cut(s)	978
BstSCI	CCNGG	3 cut(s)	715, 716, 976
BstSFI	CTRYAG	1 cut(s)	636
BstSLI	GKGCMC	1 cut(s)	897
BstUI	CGCG	1 cut(s)	247
BstV1I	GCAGC	1 cut(s)	650
Bsu15I	ATCGAT	1 cut(s)	693
BsuRI	GGCC	2 cut(s)	152, 762
BsuTUI	ATCGAT	1 cut(s)	693
BtsCI	GGATG	2 cut(s)	361, 649
BtsIMutI	CAGTG	3 cut(s)	92, 767, 810
Cac8I	GCNNGC	1 cut(s)	505
CciI	TCATGA	1 cut(s)	783
CfoI	GCGC	2 cut(s)	249, 492
Cfr10I	RCCGGY	1 cut(s)	615
Cfr9I	CCCGGG	1 cut(s)	716
ClaI	ATCGAT	1 cut(s)	693
Csp6I	GTAC	4 cut(s)	135, 222, 793, 880
CspAI	ACCGGT	1 cut(s)	615
CspCI	CAANNNNNGTGG	2 cut(s)	1021, 1056
CviAII	CATG	3 cut(s)	508, 758, 784
CviQI	GTAC	4 cut(s)	135, 222, 793, 880
DdeI	CTNAG	5 cut(s)	12, 360, 527, 770, 914
DpnI	GATC	3 cut(s)	321, 380, 951
DpnII	GATC	3 cut(s)	319, 378, 949
Eam1104I	CTCTTC	3 cut(s)	368, 472, 903
EarI	CTCTTC	3 cut(s)	368, 472, 903
Eco32I	GATATC	1 cut(s)	691
Eco47III	AGCGCT	1 cut(s)	491
Eco88I	CYCGRG	1 cut(s)	716
EcoRII	CCWGG	1 cut(s)	976
EcoRV	GATATC	1 cut(s)	691
FaeI	CATG	3 cut(s)	511, 761, 787
FalI	AAGNNNNNCTT	2 cut(s)	410, 442
FaqI	GGGAC	1 cut(s)	421
FatI	CATG	3 cut(s)	507, 757, 783
FbaI	TGATCA	1 cut(s)	949
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	2 cut(s)	639, 1072
FokI	GGATG	2 cut(s)	368, 656
Fsp4HI	GCNGC	2 cut(s)	639, 1072
FspBI	CTAG	4 cut(s)	180, 219, 240, 1075
GlaI	GCGC	2 cut(s)	248, 491
GluI	GCNGC	2 cut(s)	639, 1072
HaeII	RGCGCY	1 cut(s)	493
HaeIII	GGCC	2 cut(s)	152, 762
HapII	CCGG	3 cut(s)	250, 616, 717
HhaI	GCGC	2 cut(s)	249, 492
Hin1II	CATG	3 cut(s)	511, 761, 787
Hin6I	GCGC	2 cut(s)	247, 490
HinP1I	GCGC	2 cut(s)	247, 490
HinfI	GANTC	2 cut(s)	632, 666
HpaII	CCGG	3 cut(s)	250, 616, 717
HphI	GGTGA	1 cut(s)	1055
Hpy166II	GTNNAC	2 cut(s)	424, 895
Hpy188I	TCNGA	2 cut(s)	319, 671
Hpy188III	TCNNGA	6 cut(s)	188, 495, 544, 554, 784, 953
Hpy8I	GTNNAC	2 cut(s)	424, 895
HpyAV	CCTTC	5 cut(s)	275, 412, 441, 870, 1024
HpyCH4III	ACNGT	2 cut(s)	602, 805
HpyCH4V	TGCA	6 cut(s)	65, 202, 409, 638, 895, 971
HpyF10VI	GCNNNNNNNGC	1 cut(s)	532
HpyF3I	CTNAG	5 cut(s)	12, 360, 527, 770, 914
Hsp92II	CATG	3 cut(s)	511, 761, 787
HspAI	GCGC	2 cut(s)	247, 490
Ksp22I	TGATCA	1 cut(s)	949
Kzo9I	GATC	3 cut(s)	319, 378, 949
LguI	GCTCTTC	2 cut(s)	472, 903
LmnI	GCTCC	3 cut(s)	517, 808, 982
Lsp1109I	GCAGC	1 cut(s)	650
LweI	GCATC	1 cut(s)	346
MaeI	CTAG	4 cut(s)	180, 219, 240, 1075
MaeIII	GTNAC	1 cut(s)	38
MalI	GATC	3 cut(s)	321, 380, 951
MboI	GATC	3 cut(s)	319, 378, 949
MboII	GAAGA	6 cut(s)	385, 489, 577, 917, 920, 1009
MfeI	CAATTG	1 cut(s)	1036
MhlI	GDGCHC	1 cut(s)	897
MluCI	AATT	8 cut(s)	43, 412, 498, 547, 812, 920, 1009, 1036
MmeI	TCCRAC	1 cut(s)	330
MseI	TTAA	2 cut(s)	738, 944
MslI	CAYNNNNRTG	1 cut(s)	590
MspA1I	CMGCKG	1 cut(s)	641
MspI	CCGG	3 cut(s)	250, 616, 717
MspR9I	CCNGG	3 cut(s)	717, 718, 978
MunI	CAATTG	1 cut(s)	1036
Mva1269I	GAATGC	1 cut(s)	597
MvaI	CCWGG	1 cut(s)	978
MvnI	CGCG	1 cut(s)	247
MwoI	GCNNNNNNNGC	1 cut(s)	532
NciI	CCSGG	2 cut(s)	717, 718
NdeII	GATC	3 cut(s)	319, 378, 949
NlaIII	CATG	3 cut(s)	511, 761, 787
NlaIV	GGNNCC	1 cut(s)	519
NmeAIII	GCCGAG	1 cut(s)	502
NspV	TTCGAA	1 cut(s)	589
PagI	TCATGA	1 cut(s)	783
PciSI	GCTCTTC	2 cut(s)	472, 903
PctI	GAATGC	1 cut(s)	597
PfeI	GAWTC	2 cut(s)	632, 666
PflMI	CCANNNNNTGG	1 cut(s)	329
PinAI	ACCGGT	1 cut(s)	615
PkrI	GCNGC	2 cut(s)	640, 1073
Psp6I	CCWGG	1 cut(s)	976
PspGI	CCWGG	1 cut(s)	976
PspN4I	GGNNCC	1 cut(s)	519
PstI	CTGCAG	1 cut(s)	640
RsaI	GTAC	4 cut(s)	136, 223, 794, 881
RsaNI	GTAC	4 cut(s)	135, 222, 793, 880
RseI	CAYNNNNRTG	1 cut(s)	590
SapI	GCTCTTC	2 cut(s)	472, 903
SaqAI	TTAA	2 cut(s)	738, 944
SatI	GCNGC	2 cut(s)	639, 1072
Sau3AI	GATC	3 cut(s)	319, 378, 949
ScaI	AGTACT	1 cut(s)	223
ScrFI	CCNGG	3 cut(s)	717, 718, 978
SduI	GDGCHC	1 cut(s)	897
SfaNI	GCATC	1 cut(s)	346
SfcI	CTRYAG	1 cut(s)	636
SfuI	TTCGAA	1 cut(s)	589
SmaI	CCCGGG	1 cut(s)	718
SmiMI	CAYNNNNRTG	1 cut(s)	590
SmlI	CTYRAG	1 cut(s)	493
SmoI	CTYRAG	1 cut(s)	493
SpeI	ACTAGT	1 cut(s)	218
Sse9I	AATT	8 cut(s)	43, 412, 498, 547, 812, 920, 1009, 1036
SsiI	CCGC	2 cut(s)	245, 641
SspMI	CTAG	4 cut(s)	180, 219, 240, 1075
StyD4I	CCNGG	3 cut(s)	715, 716, 976
TaaI	ACNGT	2 cut(s)	602, 805
TaqI	TCGA	4 cut(s)	265, 589, 693, 703
TasI	AATT	8 cut(s)	43, 412, 498, 547, 812, 920, 1009, 1036
TatI	WGTACW	1 cut(s)	221
TfiI	GAWTC	2 cut(s)	632, 666
Tru1I	TTAA	2 cut(s)	738, 944
Tru9I	TTAA	2 cut(s)	738, 944
TscAI	CASTG	3 cut(s)	99, 774, 810
TseI	GCWGC	2 cut(s)	638, 1071
TspDTI	ATGAA	3 cut(s)	951, 1062, 1068
TspMI	CCCGGG	1 cut(s)	716
TspRI	CASTG	3 cut(s)	99, 774, 810
Van91I	CCANNNNNTGG	1 cut(s)	329
VneI	GTGCAC	1 cut(s)	893
XapI	RAATTY	3 cut(s)	547, 920, 1009
XmaI	CCCGGG	1 cut(s)	716
XmiI	GTMKAC	1 cut(s)	423
XspI	CTAG	4 cut(s)	180, 219, 240, 1075
ZrmI	AGTACT	1 cut(s)	223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.