Rw7G014110
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0007506
Physical Location & Seq
Forward (+)
13578686 .. 13580892
2207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014110.1

Sequence Viewer

Length: 1080 bp
ATGGCAATGACTCATCCATGCTTTTCTGCTTCCTCGTTTTACATTTCTTGCTTCCCCAAAAATGCAACTCTTTCTTGGCCTATCCAAGTTTCTCAACAAAGGGTCTATGATTTTAATAAAATCCAAGCCTGTGCAATCCCCAGGGATATCATTGAACATTCTGGTAATGGGTTTGCTGGTTTTCCTCAAAAGCATTACTCTCATAAAGAATCAGGTACTAGTACCAGTAAAACTAAAAGTCCACCTCCAAGGCCTCGGCGAATAATTCTGGTTCGGCATGGGCAGAGTGAAGGAAATGTGGATGAGGGAGTTTACACAAGAGTTTCTGATCCAAAGATTGGATTGACAGAGAAAGGTGTGGTAGATGCTGAGAAATGTGGGAGGAGGATCAGGGAGATGATTGAGGAAGACCAAGTGCATAATTGGAAGGTCTATTTTTATGTTTCTCCTTATAAAAGAGCAGTTGACACACTCAAGGGTTTAGGGAAATCATTTGAGCGCTCAAGAATTGTTGGCATGAGAGAAGAACCTCGCTTAAGAGAGCAAGATTTTGGGAATTTTCAGGATAGGGAGAAGATGAGAGTGGAGAAAGCTATCCGCATGCGTTATGGTCGGTTCTTTTACCGGTTTCCTAATGGGGAATCTGCAGCTGATGTTTATGACAGAATCACAGGATTCAGAGAAACACTGAAATCGGATATTGACGTGGGACGGTTTCAGCCACCAGGGCAGAGAAACCCAAACATCAACTTGGTGATAGTTTCACATGGCTTAACTCTGAGGGTGTTTCTGATGAGATGGTATAAATGGACAGTGGAGCAGTTTGAGAGACTGAACAACTTTAGTAATGGAAGCATGGTGGTTATGGAACGAGGCTATGGTGGAAGGTACAGTTTGTCAGTGCACCACGAAGAAGAAGAGCTAAGAGAGTTTGGATTGTCAGATGAAATGCTAACTGATCAGGAATGGCAAAAATATGCAAAACCTGGGGAGCTGAACTATGACTGCCCAACGCTAAATTCCTTCTTCACCCACTTCGGTGAAGACGATGATGGTGCAGCTGAGGAGGAGGAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

359

Amino Acids

41.74

Weight (kDa)

6.82

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 88 - 296 3.1e-29 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 453
AccB7I CCANNNNNTGG 1 cut(s) 338
AciI CCGC 1 cut(s) 598
AclWI GGATC 2 cut(s) 323, 395
AcsI RAATTY 2 cut(s) 556, 1018
AfaI GTAC 4 cut(s) 217, 223, 890, 1076
AfeI AGCGCT 1 cut(s) 500
AfiI CCNNNNNNNGG 1 cut(s) 338
AflII CTTAAG 1 cut(s) 535
AgeI ACCGGT 1 cut(s) 624
AgsI TTSAA 1 cut(s) 155
AhlI ACTAGT 1 cut(s) 218
AjiI CACGTC 1 cut(s) 706
AjnI CCWGG 3 cut(s) 140, 724, 985
AjuI GAANNNNNNNTTGG 2 cut(s) 1003, 1035
AleI CACNNNNGTG 1 cut(s) 1038
AluBI AGCT 5 cut(s) 593, 650, 922, 994, 1061
AluI AGCT 5 cut(s) 593, 650, 922, 994, 1061
Alw21I GWGCWC 1 cut(s) 906
Alw26I GTCTC 1 cut(s) 823
Alw44I GTGCAC 1 cut(s) 902
AlwI GGATC 2 cut(s) 323, 395
Aor51HI AGCGCT 1 cut(s) 500
AoxI GGCC 2 cut(s) 77, 251
ApaLI GTGCAC 1 cut(s) 902
ApeKI GCWGC 2 cut(s) 647, 1058
ApoI RAATTY 2 cut(s) 556, 1018
AsiGI ACCGGT 1 cut(s) 624
AspLEI GCGC 1 cut(s) 501
AsuHPI GGTGA 3 cut(s) 766, 1021, 1052
BaeGI GKGCMC 1 cut(s) 906
BbsI GAAGAC 2 cut(s) 414, 1050
Bbv12I GWGCWC 1 cut(s) 906
BbvCI CCTCAGC 1 cut(s) 1062
BbvI GCAGC 2 cut(s) 659, 1070
BccI CCATC 2 cut(s) 792, 1046
BcgI CGANNNNNNTGC 2 cut(s) 1037, 1071
BciT130I CCWGG 3 cut(s) 142, 726, 987
BclI TGATCA 1 cut(s) 958
BcoDI GTCTC 1 cut(s) 823
BcuI ACTAGT 1 cut(s) 218
BfaI CTAG 2 cut(s) 219, 1078
BfmI CTRYAG 1 cut(s) 645
BfoI RGCGCY 1 cut(s) 502
BfrI CTTAAG 1 cut(s) 535
BglI GCCNNNNNGGC 1 cut(s) 727
BisI GCNGC 2 cut(s) 648, 1059
BlsI GCNGC 2 cut(s) 649, 1060
BmcAI AGTACT 1 cut(s) 1076
Bme1390I CCNGG 3 cut(s) 142, 726, 987
BmgBI CACGTC 1 cut(s) 706
BmrFI CCNGG 3 cut(s) 142, 726, 987
BmsI GCATC 1 cut(s) 355
BpiI GAAGAC 2 cut(s) 414, 1050
Bpu10I CCTNAGC 1 cut(s) 1062
BpuEI CTTGAG 2 cut(s) 458, 487
BsaJI CCNNGG 6 cut(s) 140, 141, 248, 254, 725, 986
BsaWI WCCGGW 1 cut(s) 624
BsaXI ACNNNNNCTCC 1 cut(s) 1058
Bsc4I CCNNNNNNNGG 1 cut(s) 338
Bse118I RCCGGY 1 cut(s) 624
Bse1I ACTGG 1 cut(s) 225
Bse3DI GCAATG 1 cut(s) 12
BseBI CCWGG 3 cut(s) 142, 726, 987
BseDI CCNNGG 6 cut(s) 140, 141, 248, 254, 725, 986
BseGI GGATG 2 cut(s) 13, 307
BseLI CCNNNNNNNGG 1 cut(s) 338
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 3 cut(s) 360, 770, 1053
BseNI ACTGG 1 cut(s) 225
BseRI GAGGAG 2 cut(s) 397, 1079
BseSI GKGCMC 1 cut(s) 906
BseXI GCAGC 2 cut(s) 659, 1070
BsgI GTGCAG 1 cut(s) 1077
BshFI GGCC 2 cut(s) 79, 253
BshTI ACCGGT 1 cut(s) 624
BsiHKAI GWGCWC 1 cut(s) 906
BsiSI CCGG 1 cut(s) 625
BslFI GGGAC 1 cut(s) 723
BslI CCNNNNNNNGG 1 cut(s) 338
BsmAI GTCTC 1 cut(s) 823
BsmFI GGGAC 1 cut(s) 723
BsnI GGCC 2 cut(s) 79, 253
Bsp1286I GDGCHC 1 cut(s) 906
Bsp143I GATC 3 cut(s) 328, 387, 958
BspACI CCGC 1 cut(s) 598
BspANI GGCC 2 cut(s) 79, 253
BspCNI CTCAG 3 cut(s) 361, 771, 1054
BspMAI CTGCAG 1 cut(s) 649
BspPI GGATC 2 cut(s) 323, 395
BspQI GCTCTTC 1 cut(s) 912
BspTI CTTAAG 1 cut(s) 535
BsrDI GCAATG 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 624
BsrI ACTGG 1 cut(s) 225
BssAI RCCGGY 1 cut(s) 624
BssECI CCNNGG 6 cut(s) 140, 141, 248, 254, 725, 986
BssMI GATC 3 cut(s) 328, 387, 958
BssT1I CCWWGG 1 cut(s) 248
Bst2UI CCWGG 3 cut(s) 142, 726, 987
Bst4CI ACNGT 3 cut(s) 714, 814, 893
Bst6I CTCTTC 1 cut(s) 912
BstAFI CTTAAG 1 cut(s) 535
BstC8I GCNNGC 1 cut(s) 602
BstDEI CTNAG 4 cut(s) 369, 779, 923, 1062
BstF5I GGATG 2 cut(s) 13, 307
BstH2I RGCGCY 1 cut(s) 502
BstHHI GCGC 1 cut(s) 501
BstKTI GATC 3 cut(s) 331, 390, 961
BstMAI GTCTC 1 cut(s) 823
BstMBI GATC 3 cut(s) 328, 387, 958
BstMWI GCNNNNNNNGC 1 cut(s) 727
BstNI CCWGG 3 cut(s) 142, 726, 987
BstNSI RCATGY 1 cut(s) 604
BstSCI CCNGG 3 cut(s) 140, 724, 985
BstSFI CTRYAG 1 cut(s) 645
BstSLI GKGCMC 1 cut(s) 906
BstV1I GCAGC 2 cut(s) 659, 1070
BstV2I GAAGAC 2 cut(s) 414, 1050
BsuRI GGCC 2 cut(s) 79, 253
BtrI CACGTC 1 cut(s) 706
BtsCI GGATG 2 cut(s) 13, 307
BtsIMutI CAGTG 3 cut(s) 686, 819, 906
Cac8I GCNNGC 1 cut(s) 602
CfoI GCGC 1 cut(s) 501
Cfr10I RCCGGY 1 cut(s) 624
Csp6I GTAC 4 cut(s) 216, 222, 889, 1075
CspAI ACCGGT 1 cut(s) 624
CviAII CATG 6 cut(s) 18, 278, 517, 601, 767, 856
CviQI GTAC 4 cut(s) 216, 222, 889, 1075
DdeI CTNAG 4 cut(s) 369, 779, 923, 1062
DpnI GATC 3 cut(s) 330, 389, 960
DpnII GATC 3 cut(s) 328, 387, 958
Eam1104I CTCTTC 1 cut(s) 912
EarI CTCTTC 1 cut(s) 912
Eco130I CCWWGG 1 cut(s) 248
Eco147I AGGCCT 1 cut(s) 253
Eco32I GATATC 1 cut(s) 148
Eco47III AGCGCT 1 cut(s) 500
EcoRII CCWGG 3 cut(s) 140, 724, 985
EcoRV GATATC 1 cut(s) 148
EcoT14I CCWWGG 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 248
FaeI CATG 6 cut(s) 21, 281, 520, 604, 770, 859
FaqI GGGAC 1 cut(s) 723
FatI CATG 6 cut(s) 17, 277, 516, 600, 766, 855
FbaI TGATCA 1 cut(s) 958
Fnu4HI GCNGC 2 cut(s) 648, 1059
FokI GGATG 1 cut(s) 314
Fsp4HI GCNGC 2 cut(s) 648, 1059
FspBI CTAG 2 cut(s) 219, 1078
GlaI GCGC 1 cut(s) 500
GluI GCNGC 2 cut(s) 648, 1059
HaeII RGCGCY 1 cut(s) 502
HaeIII GGCC 2 cut(s) 79, 253
HapII CCGG 1 cut(s) 625
HhaI GCGC 1 cut(s) 501
Hin1II CATG 6 cut(s) 21, 281, 520, 604, 770, 859
Hin6I GCGC 1 cut(s) 499
HinP1I GCGC 1 cut(s) 499
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HinfI GANTC 5 cut(s) 10, 209, 641, 666, 675
HpaII CCGG 1 cut(s) 625
HphI GGTGA 3 cut(s) 766, 1021, 1052
Hpy166II GTNNAC 4 cut(s) 242, 313, 466, 904
Hpy188I TCNGA 6 cut(s) 328, 680, 697, 780, 792, 943
Hpy188III TCNNGA 3 cut(s) 504, 563, 962
Hpy8I GTNNAC 4 cut(s) 242, 313, 466, 904
HpyAV CCTTC 4 cut(s) 284, 421, 879, 1033
HpyCH4III ACNGT 3 cut(s) 714, 814, 893
HpyCH4IV ACGT 1 cut(s) 705
HpyCH4V TGCA 7 cut(s) 65, 134, 418, 647, 904, 980, 1058
HpyF10VI GCNNNNNNNGC 1 cut(s) 727
HpyF3I CTNAG 4 cut(s) 369, 779, 923, 1062
HpySE526I ACGT 1 cut(s) 705
Hsp92II CATG 6 cut(s) 21, 281, 520, 604, 770, 859
HspAI GCGC 1 cut(s) 499
Ksp22I TGATCA 1 cut(s) 958
Kzo9I GATC 3 cut(s) 328, 387, 958
LguI GCTCTTC 1 cut(s) 912
LmnI GCTCC 2 cut(s) 817, 991
Lsp1109I GCAGC 2 cut(s) 659, 1070
LweI GCATC 1 cut(s) 355
MaeI CTAG 2 cut(s) 219, 1078
MaeII ACGT 1 cut(s) 705
MalI GATC 3 cut(s) 330, 389, 960
MboI GATC 3 cut(s) 328, 387, 958
MboII GAAGA 8 cut(s) 419, 536, 586, 923, 926, 929, 1018, 1055
MhlI GDGCHC 1 cut(s) 906
MluCI AATT 5 cut(s) 264, 421, 507, 556, 1018
MlyI GAGTC 1 cut(s) 4
MseI TTAA 3 cut(s) 114, 536, 773
MslI CAYNNNNRTG 1 cut(s) 1038
MspA1I CMGCKG 2 cut(s) 650, 1061
MspCI CTTAAG 1 cut(s) 535
MspI CCGG 1 cut(s) 625
MspR9I CCNGG 3 cut(s) 142, 726, 987
MvaI CCWGG 3 cut(s) 142, 726, 987
MwoI GCNNNNNNNGC 1 cut(s) 727
NdeII GATC 3 cut(s) 328, 387, 958
NlaIII CATG 6 cut(s) 21, 281, 520, 604, 770, 859
NmeAIII GCCGAG 1 cut(s) 235
NspI RCATGY 1 cut(s) 604
OliI CACNNNNGTG 1 cut(s) 1038
PaeI GCATGC 1 cut(s) 604
PasI CCCWGGG 1 cut(s) 141
PceI AGGCCT 1 cut(s) 253
PciSI GCTCTTC 1 cut(s) 912
PcsI WCGNNNNNNNCGW 1 cut(s) 1044
PfeI GAWTC 4 cut(s) 209, 641, 666, 675
PflMI CCANNNNNTGG 1 cut(s) 338
PinAI ACCGGT 1 cut(s) 624
PkrI GCNGC 2 cut(s) 649, 1060
PleI GAGTC 1 cut(s) 4
PpsI GAGTC 1 cut(s) 4
PsiI TTATAA 1 cut(s) 453
Psp6I CCWGG 3 cut(s) 140, 724, 985
PspGI CCWGG 3 cut(s) 140, 724, 985
PstI CTGCAG 1 cut(s) 649
PvuII CAGCTG 2 cut(s) 650, 1061
RsaI GTAC 4 cut(s) 217, 223, 890, 1076
RsaNI GTAC 4 cut(s) 216, 222, 889, 1075
RseI CAYNNNNRTG 1 cut(s) 1038
SapI GCTCTTC 1 cut(s) 912
SaqAI TTAA 3 cut(s) 114, 536, 773
SatI GCNGC 2 cut(s) 648, 1059
Sau3AI GATC 3 cut(s) 328, 387, 958
ScaI AGTACT 1 cut(s) 1076
SchI GAGTC 1 cut(s) 4
ScrFI CCNGG 3 cut(s) 142, 726, 987
SduI GDGCHC 1 cut(s) 906
SfaNI GCATC 1 cut(s) 355
SfcI CTRYAG 1 cut(s) 645
SmiMI CAYNNNNRTG 1 cut(s) 1038
SmlI CTYRAG 3 cut(s) 473, 502, 535
SmoI CTYRAG 3 cut(s) 473, 502, 535
SpeI ACTAGT 1 cut(s) 218
SphI GCATGC 1 cut(s) 604
Sse9I AATT 5 cut(s) 264, 421, 507, 556, 1018
SseBI AGGCCT 1 cut(s) 253
SsiI CCGC 1 cut(s) 598
SspMI CTAG 2 cut(s) 219, 1078
StuI AGGCCT 1 cut(s) 253
StyD4I CCNGG 3 cut(s) 140, 724, 985
StyI CCWWGG 1 cut(s) 248
TaaI ACNGT 3 cut(s) 714, 814, 893
TaiI ACGT 1 cut(s) 708
TasI AATT 5 cut(s) 264, 421, 507, 556, 1018
TatI WGTACW 1 cut(s) 1074
TfiI GAWTC 4 cut(s) 209, 641, 666, 675
Tru1I TTAA 3 cut(s) 114, 536, 773
Tru9I TTAA 3 cut(s) 114, 536, 773
TscAI CASTG 3 cut(s) 693, 819, 906
TseI GCWGC 2 cut(s) 647, 1058
TspDTI ATGAA 1 cut(s) 960
TspRI CASTG 3 cut(s) 693, 819, 906
Van91I CCANNNNNTGG 1 cut(s) 338
Vha464I CTTAAG 1 cut(s) 535
VneI GTGCAC 1 cut(s) 902
XapI RAATTY 2 cut(s) 556, 1018
XceI RCATGY 1 cut(s) 604
XspI CTAG 2 cut(s) 219, 1078
ZrmI AGTACT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.