Rw7G014100
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0007506
Physical Location & Seq
Forward (+)
13575495 .. 13578054
2560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014100.1

Sequence Viewer

Length: 1005 bp
ATGGCAGTGACTCAATTGTGCTCTTCTGCTTCCTTGTTTTACATGTCCTGCTTCCCCAAAAATGCGACTCTTTCTTCCCCTATCCAATTTTCTCAACAAAGGGTTGTTAGTTTTAATACAGTTATATGCTGTGCAAGCCCCAGGGATACTATTGAACATTCTGGTAATGGGTTTGTTGGTCTTCCTGAAAAACTGTACTCTCATAGAGAATCAGGTACTAGTAGTAGTACTAGTACTAATAAAGTTGCACCTCCAAGGCCTCGCCGGATCATTTTGGTTCGGCATGGGCAGAGTGAAGGAAATGTGGACGAGAGCGTCTACACTAGAGTTTCTGATCCAAAGATCCGATTGACCGAGAAAGACAAAGTGCATGATTGGAAGGTCTACTTTTATGTGTCTCCTTATAGAAGAACAGTTGAAACACTCAAGGGGTTAGGGAAAGCATTTGAGCGCTCAAGAATTGCTGGCATGAGAGAAGAACCTCGCCTAAGAGAGCAAGATTTTGGGAATTTTCAGGATAGGGAGAAGATGAGACTTGATAAAGCTATGCGTATGCTTTACGGTCGATTCTTTTACCGGTTTCCTAATGGGGAATCTGCAGCTGATGTTTATGATAGGATTACAGGATTCAGAGAAACATTGAAATCGGATATTGATGTGGGAAGGTTTCAGCCACCAGGGGAGAGAAATTCAAACATCAACTTGGTGATAGTTTCGCATGGCCTAACGCTGAGAGTGTTTCTGATGAGATGGTACAAGTGGACAGTGGAGCAGTTTGATGGCCTCAACAACTTTGGTAATGGAAGCATGGTTGTTATGGAAAGAGGCTACGGTGGAAGGTACAGCTTGTCAATACACCACACAGAAGAAGAGCTAAGAGAGTTTGGATTCTCGAACGAAATGATAGTTGATCAGGAATGGCAAAAATATGCAAGAATTGGAGAGCTGAACTATGATTGTCCAACGCTAAACTCCTTCTTCACCCACTTTGGTGAAGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

334

Amino Acids

38.62

Weight (kDa)

8.5

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 90 - 280 7.1e-21 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 314
AccI GTMKAC 2 cut(s) 318, 384
AclWI GGATC 3 cut(s) 275, 329, 337
AcsI RAATTY 2 cut(s) 508, 688
AfaI GTAC 6 cut(s) 197, 217, 229, 235, 755, 842
AfeI AGCGCT 1 cut(s) 452
AflIII ACRYGT 1 cut(s) 42
AgeI ACCGGT 1 cut(s) 576
AgsI TTSAA 4 cut(s) 155, 419, 643, 693
AhlI ACTAGT 2 cut(s) 218, 230
AjnI CCWGG 2 cut(s) 140, 676
AleI CACNNNNGTG 1 cut(s) 990
AluBI AGCT 5 cut(s) 545, 602, 846, 874, 946
AluI AGCT 5 cut(s) 545, 602, 846, 874, 946
Alw21I GWGCWC 1 cut(s) 23
Alw26I GTCTC 2 cut(s) 402, 526
AlwI GGATC 3 cut(s) 275, 329, 337
Aor51HI AGCGCT 1 cut(s) 452
AoxI GGCC 3 cut(s) 257, 721, 781
ApeKI GCWGC 1 cut(s) 599
ApoI RAATTY 2 cut(s) 508, 688
AsiGI ACCGGT 1 cut(s) 576
AspLEI GCGC 1 cut(s) 453
AsuHPI GGTGA 3 cut(s) 718, 973, 1004
BbsI GAAGAC 1 cut(s) 173
Bbv12I GWGCWC 1 cut(s) 23
BbvI GCAGC 1 cut(s) 611
BccI CCATC 2 cut(s) 744, 773
BciT130I CCWGG 2 cut(s) 142, 678
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 910
BcoDI GTCTC 2 cut(s) 402, 526
BcuI ACTAGT 2 cut(s) 218, 230
BfaI CTAG 3 cut(s) 219, 231, 324
BfmI CTRYAG 1 cut(s) 597
BfoI RGCGCY 1 cut(s) 454
BfuI GTATCC 1 cut(s) 139
BisI GCNGC 1 cut(s) 600
BlsI GCNGC 1 cut(s) 601
BmcAI AGTACT 2 cut(s) 229, 235
Bme1390I CCNGG 2 cut(s) 142, 678
BmrFI CCNGG 2 cut(s) 142, 678
BpiI GAAGAC 1 cut(s) 173
BpuEI CTTGAG 2 cut(s) 410, 439
BsaJI CCNNGG 4 cut(s) 140, 141, 254, 677
BsaWI WCCGGW 1 cut(s) 576
Bse118I RCCGGY 1 cut(s) 576
BseBI CCWGG 2 cut(s) 142, 678
BseDI CCNNGG 4 cut(s) 140, 141, 254, 677
BseMII CTCAG 1 cut(s) 722
BseXI GCAGC 1 cut(s) 611
Bsh1285I CGRYCG 1 cut(s) 565
BshFI GGCC 3 cut(s) 259, 723, 783
BshTI ACCGGT 1 cut(s) 576
BsiEI CGRYCG 1 cut(s) 565
BsiHKAI GWGCWC 1 cut(s) 23
BsiSI CCGG 2 cut(s) 265, 577
BsmAI GTCTC 2 cut(s) 402, 526
BsnI GGCC 3 cut(s) 259, 723, 783
Bsp1286I GDGCHC 1 cut(s) 23
Bsp143I GATC 4 cut(s) 267, 334, 342, 910
BspANI GGCC 3 cut(s) 259, 723, 783
BspCNI CTCAG 1 cut(s) 723
BspMAI CTGCAG 1 cut(s) 601
BspPI GGATC 3 cut(s) 275, 329, 337
BspQI GCTCTTC 2 cut(s) 28, 864
BsrFI RCCGGY 1 cut(s) 576
BssAI RCCGGY 1 cut(s) 576
BssECI CCNNGG 4 cut(s) 140, 141, 254, 677
BssMI GATC 4 cut(s) 267, 334, 342, 910
BssT1I CCWWGG 1 cut(s) 254
Bst2UI CCWGG 2 cut(s) 142, 678
Bst4CI ACNGT 6 cut(s) 121, 195, 415, 563, 766, 833
Bst6I CTCTTC 2 cut(s) 28, 864
BstC8I GCNNGC 2 cut(s) 136, 466
BstDEI CTNAG 3 cut(s) 488, 731, 875
BstH2I RGCGCY 1 cut(s) 454
BstHHI GCGC 1 cut(s) 453
BstKTI GATC 4 cut(s) 270, 337, 345, 913
BstMAI GTCTC 2 cut(s) 402, 526
BstMBI GATC 4 cut(s) 267, 334, 342, 910
BstMCI CGRYCG 1 cut(s) 565
BstMWI GCNNNNNNNGC 1 cut(s) 135
BstNI CCWGG 2 cut(s) 142, 678
BstNSI RCATGY 1 cut(s) 46
BstSCI CCNGG 2 cut(s) 140, 676
BstSFI CTRYAG 1 cut(s) 597
BstV1I GCAGC 1 cut(s) 611
BstV2I GAAGAC 1 cut(s) 173
BstX2I RGATCY 1 cut(s) 342
BstYI RGATCY 1 cut(s) 342
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 3 cut(s) 259, 723, 783
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 2 cut(s) 12, 771
Cac8I GCNNGC 2 cut(s) 136, 466
CfoI GCGC 1 cut(s) 453
Cfr10I RCCGGY 1 cut(s) 576
CseI GACGC 1 cut(s) 304
Csp6I GTAC 6 cut(s) 196, 216, 228, 234, 754, 841
CspAI ACCGGT 1 cut(s) 576
CviAII CATG 6 cut(s) 43, 284, 371, 469, 719, 808
CviQI GTAC 6 cut(s) 196, 216, 228, 234, 754, 841
DdeI CTNAG 3 cut(s) 488, 731, 875
DpnI GATC 4 cut(s) 269, 336, 344, 912
DpnII GATC 4 cut(s) 267, 334, 342, 910
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
Eam1104I CTCTTC 2 cut(s) 28, 864
EarI CTCTTC 2 cut(s) 28, 864
Eco130I CCWWGG 1 cut(s) 254
Eco147I AGGCCT 1 cut(s) 259
Eco47III AGCGCT 1 cut(s) 452
EcoRII CCWGG 2 cut(s) 140, 676
EcoT14I CCWWGG 1 cut(s) 254
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 6 cut(s) 46, 287, 374, 472, 722, 811
FalI AAGNNNNNCTT 2 cut(s) 371, 403
FatI CATG 6 cut(s) 42, 283, 370, 468, 718, 807
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 2 cut(s) 318, 384
Fnu4HI GCNGC 1 cut(s) 600
Fsp4HI GCNGC 1 cut(s) 600
FspBI CTAG 3 cut(s) 219, 231, 324
GlaI GCGC 1 cut(s) 452
GluI GCNGC 1 cut(s) 600
HaeII RGCGCY 1 cut(s) 454
HaeIII GGCC 3 cut(s) 259, 723, 783
HapII CCGG 2 cut(s) 265, 577
HgaI GACGC 1 cut(s) 304
HhaI GCGC 1 cut(s) 453
Hin1II CATG 6 cut(s) 46, 287, 374, 472, 722, 811
Hin6I GCGC 1 cut(s) 451
HinP1I GCGC 1 cut(s) 451
HinfI GANTC 7 cut(s) 10, 67, 209, 567, 593, 627, 888
HpaII CCGG 2 cut(s) 265, 577
HphI GGTGA 3 cut(s) 718, 973, 1004
Hpy166II GTNNAC 4 cut(s) 307, 319, 385, 762
Hpy188I TCNGA 5 cut(s) 334, 347, 632, 649, 744
Hpy188III TCNNGA 5 cut(s) 185, 456, 515, 892, 914
Hpy8I GTNNAC 4 cut(s) 307, 319, 385, 762
HpyAV CCTTC 5 cut(s) 290, 373, 657, 831, 985
HpyCH4III ACNGT 6 cut(s) 121, 195, 415, 563, 766, 833
HpyCH4V TGCA 5 cut(s) 134, 248, 370, 599, 932
HpyF10VI GCNNNNNNNGC 1 cut(s) 135
HpyF3I CTNAG 3 cut(s) 488, 731, 875
Hsp92II CATG 6 cut(s) 46, 287, 374, 472, 722, 811
HspAI GCGC 1 cut(s) 451
Ksp22I TGATCA 1 cut(s) 910
Kzo9I GATC 4 cut(s) 267, 334, 342, 910
LguI GCTCTTC 2 cut(s) 28, 864
LmnI GCTCC 1 cut(s) 769
Lsp1109I GCAGC 1 cut(s) 611
MaeI CTAG 3 cut(s) 219, 231, 324
MaeIII GTNAC 1 cut(s) 7
MalI GATC 4 cut(s) 269, 336, 344, 912
MboI GATC 4 cut(s) 267, 334, 342, 910
MboII GAAGA 9 cut(s) 15, 66, 173, 420, 488, 538, 878, 881, 970
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 1 cut(s) 342
MhlI GDGCHC 1 cut(s) 23
MluCI AATT 6 cut(s) 14, 86, 459, 508, 688, 936
MlyI GAGTC 2 cut(s) 4, 61
MmeI TCCRAC 1 cut(s) 986
MnlI CCTC 5 cut(s) 261, 270, 492, 794, 818
MseI TTAA 1 cut(s) 114
MslI CAYNNNNRTG 1 cut(s) 990
MspA1I CMGCKG 1 cut(s) 602
MspI CCGG 2 cut(s) 265, 577
MspR9I CCNGG 2 cut(s) 142, 678
MunI CAATTG 1 cut(s) 14
MvaI CCWGG 2 cut(s) 142, 678
MwoI GCNNNNNNNGC 1 cut(s) 135
NdeII GATC 4 cut(s) 267, 334, 342, 910
NlaIII CATG 6 cut(s) 46, 287, 374, 472, 722, 811
NmuCI GTSAC 1 cut(s) 7
NspI RCATGY 1 cut(s) 46
OliI CACNNNNGTG 1 cut(s) 990
PasI CCCWGGG 1 cut(s) 141
PceI AGGCCT 1 cut(s) 259
PciI ACATGT 1 cut(s) 42
PciSI GCTCTTC 2 cut(s) 28, 864
PfeI GAWTC 5 cut(s) 209, 567, 593, 627, 888
PinAI ACCGGT 1 cut(s) 576
PkrI GCNGC 1 cut(s) 601
PleI GAGTC 2 cut(s) 4, 61
PpsI GAGTC 2 cut(s) 4, 61
PscI ACATGT 1 cut(s) 42
Psp6I CCWGG 2 cut(s) 140, 676
PspGI CCWGG 2 cut(s) 140, 676
PstI CTGCAG 1 cut(s) 601
PsuI RGATCY 1 cut(s) 342
PvuII CAGCTG 1 cut(s) 602
RsaI GTAC 6 cut(s) 197, 217, 229, 235, 755, 842
RsaNI GTAC 6 cut(s) 196, 216, 228, 234, 754, 841
RseI CAYNNNNRTG 1 cut(s) 990
SapI GCTCTTC 2 cut(s) 28, 864
SaqAI TTAA 1 cut(s) 114
SatI GCNGC 1 cut(s) 600
Sau3AI GATC 4 cut(s) 267, 334, 342, 910
ScaI AGTACT 2 cut(s) 229, 235
SchI GAGTC 2 cut(s) 4, 61
ScrFI CCNGG 2 cut(s) 142, 678
SduI GDGCHC 1 cut(s) 23
SfcI CTRYAG 1 cut(s) 597
SmiMI CAYNNNNRTG 1 cut(s) 990
SmlI CTYRAG 2 cut(s) 425, 454
SmoI CTYRAG 2 cut(s) 425, 454
SpeI ACTAGT 2 cut(s) 218, 230
Sse9I AATT 6 cut(s) 14, 86, 459, 508, 688, 936
SseBI AGGCCT 1 cut(s) 259
SspMI CTAG 3 cut(s) 219, 231, 324
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 2 cut(s) 140, 676
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 6 cut(s) 121, 195, 415, 563, 766, 833
TaqI TCGA 2 cut(s) 565, 893
TaqII GACCGA 1 cut(s) 368
TasI AATT 6 cut(s) 14, 86, 459, 508, 688, 936
TatI WGTACW 3 cut(s) 195, 227, 233
TfiI GAWTC 5 cut(s) 209, 567, 593, 627, 888
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TscAI CASTG 2 cut(s) 12, 771
TseFI GTSAC 1 cut(s) 7
TseI GCWGC 1 cut(s) 599
Tsp45I GTSAC 1 cut(s) 7
TspRI CASTG 2 cut(s) 12, 771
XapI RAATTY 2 cut(s) 508, 688
XceI RCATGY 1 cut(s) 46
XmiI GTMKAC 2 cut(s) 318, 384
XspI CTAG 3 cut(s) 219, 231, 324
ZrmI AGTACT 2 cut(s) 229, 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.