Rh7CG169400
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007506
Physical Location & Seq
Forward (+)
14224071 .. 14226218
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG169400.1

Sequence Viewer

Length: 1062 bp
ATGGCAGTGACTCAATTGTGCTCTTCTGCTTCCTTGTTTTACATGTCCTGCTTCCCCAAAAATGCGACTCTTTCTTCACCTATCCAATTTTCTCAACAAAGGGTTGTTAGTTTTAATACAGTTATATGCTGTGCAAGCCCCAGGGATACTATTGAACATTCTGGTAATGGGTTTGGTGGTCTTCCTGAAAAACTTTACTCTCATAGAGAATCAGGTACTAGTAGTAGTACTAGTACTAATAAAGTTGCACCTCCAAGGCCTCGCCGGATAATTTTGGTTCGGCATGGCCAGAGTGAAGGAAATGTGGATGAGAGCGTCTACACTAGAGTTTCTGATCCAAAGATCCGATTGACCGAGAAAGGTATGGCTGATGCTGAGGAATGCGGGAAGAGGATCAGGGAGATGATTGAAAAAGACAAAGTGCATGATTGGAAGGTCTACTTCTATGTGTCTCCTTATAGAAGAACAGTTGAAACACTCAAGGAGTTAGGGAAAGCATTTGAGCGCTCAAGAATTGCTGGCATGAGAGAAGAACCTCGCCTAAGAGAGCAAGATTTTGGGAATTTTCAGGATAGGGAGAAGATGAGACTTGATAAAGCTATGCGTATGCTTTACGGTCGATTCTTTTACCGGTTTCCTAATGGGGAATCTGCAGCTGATGTTTATGATAGGATTACAGGATTCAGAGAAACATTGAAATCGGATATTGATGTGGGAAGGTTTCAGCCACCAGGGGAGAGAAATTCAAACATCAACTTGGTGATAGTTTCGCATGGCCTAACGCTGAGAGTGTTTCTGATGAGATGGTACAAGTGGACAGTGGAGCAGTTTGATGGCCTCAACAACTTTGGTAATGGAAGCATGGTTGTTATGGAAAGAGGCTACGGTGGAAGGTACAGCTTATCAATACACCACACAGAAGAAGAGCTAAGAGAGTTTGGATTCTCGAACGAAATGATAGTTGATCAGGAATGGCAAAAATATGCAAGAATTGGAGAGCTGAACTATGATTGTCCAACGCTAAACTCCCTCTTCACCCACTTTGGTGAAGATGATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

353

Amino Acids

40.82

Weight (kDa)

8.14

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 90 - 298 9.2e-29 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 318, 438
AciI CCGC 1 cut(s) 384
AclWI GGATC 3 cut(s) 329, 337, 401
AcoI YGGCCR 1 cut(s) 286
AcsI RAATTY 2 cut(s) 562, 742
AfaI GTAC 5 cut(s) 217, 229, 235, 809, 896
AfeI AGCGCT 1 cut(s) 506
AflIII ACRYGT 1 cut(s) 42
AgeI ACCGGT 1 cut(s) 630
AgsI TTSAA 5 cut(s) 155, 410, 473, 697, 747
AhlI ACTAGT 2 cut(s) 218, 230
AjnI CCWGG 2 cut(s) 140, 730
AleI CACNNNNGTG 1 cut(s) 1044
AluBI AGCT 5 cut(s) 599, 656, 900, 928, 1000
AluI AGCT 5 cut(s) 599, 656, 900, 928, 1000
Alw21I GWGCWC 1 cut(s) 23
Alw26I GTCTC 2 cut(s) 456, 580
AlwI GGATC 3 cut(s) 329, 337, 401
Aor51HI AGCGCT 1 cut(s) 506
AoxI GGCC 4 cut(s) 257, 286, 775, 835
ApeKI GCWGC 1 cut(s) 653
ApoI RAATTY 2 cut(s) 562, 742
AsiGI ACCGGT 1 cut(s) 630
AspLEI GCGC 1 cut(s) 507
AsuHPI GGTGA 4 cut(s) 69, 772, 1027, 1058
BalI TGGCCA 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 173
Bbv12I GWGCWC 1 cut(s) 23
BbvCI CCTCAGC 1 cut(s) 375
BbvI GCAGC 1 cut(s) 665
BccI CCATC 2 cut(s) 798, 827
BciT130I CCWGG 2 cut(s) 142, 732
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 964
BcoDI GTCTC 2 cut(s) 456, 580
BcuI ACTAGT 2 cut(s) 218, 230
BfaI CTAG 3 cut(s) 219, 231, 324
BfmI CTRYAG 1 cut(s) 651
BfoI RGCGCY 1 cut(s) 508
BfuI GTATCC 1 cut(s) 139
BisI GCNGC 1 cut(s) 654
BlsI GCNGC 1 cut(s) 655
BmcAI AGTACT 2 cut(s) 229, 235
Bme1390I CCNGG 2 cut(s) 142, 732
BmrFI CCNGG 2 cut(s) 142, 732
BmsI GCATC 1 cut(s) 361
BpiI GAAGAC 1 cut(s) 173
Bpu10I CCTNAGC 1 cut(s) 375
BpuEI CTTGAG 2 cut(s) 464, 493
Bsa29I ATCGAT 1 cut(s) 1057
BsaJI CCNNGG 4 cut(s) 140, 141, 254, 731
BsaWI WCCGGW 1 cut(s) 630
Bse118I RCCGGY 1 cut(s) 630
BseBI CCWGG 2 cut(s) 142, 732
BseCI ATCGAT 1 cut(s) 1057
BseDI CCNNGG 4 cut(s) 140, 141, 254, 731
BseGI GGATG 1 cut(s) 313
BseMII CTCAG 2 cut(s) 366, 776
BseXI GCAGC 1 cut(s) 665
Bsh1285I CGRYCG 1 cut(s) 619
BshFI GGCC 4 cut(s) 259, 288, 777, 837
BshTI ACCGGT 1 cut(s) 630
BshVI ATCGAT 1 cut(s) 1057
BsiEI CGRYCG 1 cut(s) 619
BsiHKAI GWGCWC 1 cut(s) 23
BsiSI CCGG 2 cut(s) 265, 631
BsmAI GTCTC 2 cut(s) 456, 580
BsmI GAATGC 1 cut(s) 386
BsnI GGCC 4 cut(s) 259, 288, 777, 837
Bsp1286I GDGCHC 1 cut(s) 23
Bsp143I GATC 5 cut(s) 334, 342, 393, 964, 1054
BspACI CCGC 1 cut(s) 384
BspANI GGCC 4 cut(s) 259, 288, 777, 837
BspCNI CTCAG 2 cut(s) 367, 777
BspDI ATCGAT 1 cut(s) 1057
BspMAI CTGCAG 1 cut(s) 655
BspPI GGATC 3 cut(s) 329, 337, 401
BspQI GCTCTTC 2 cut(s) 28, 918
BsrFI RCCGGY 1 cut(s) 630
BssAI RCCGGY 1 cut(s) 630
BssECI CCNNGG 4 cut(s) 140, 141, 254, 731
BssMI GATC 5 cut(s) 334, 342, 393, 964, 1054
BssT1I CCWWGG 1 cut(s) 254
Bst2UI CCWGG 2 cut(s) 142, 732
Bst4CI ACNGT 5 cut(s) 121, 469, 617, 820, 887
Bst6I CTCTTC 4 cut(s) 28, 383, 918, 1037
BstC8I GCNNGC 2 cut(s) 136, 520
BstDEI CTNAG 4 cut(s) 375, 542, 785, 929
BstF5I GGATG 1 cut(s) 313
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 1 cut(s) 507
BstKTI GATC 5 cut(s) 337, 345, 396, 967, 1057
BstMAI GTCTC 2 cut(s) 456, 580
BstMBI GATC 5 cut(s) 334, 342, 393, 964, 1054
BstMCI CGRYCG 1 cut(s) 619
BstMWI GCNNNNNNNGC 1 cut(s) 135
BstNI CCWGG 2 cut(s) 142, 732
BstNSI RCATGY 1 cut(s) 46
BstSCI CCNGG 2 cut(s) 140, 730
BstSFI CTRYAG 1 cut(s) 651
BstV1I GCAGC 1 cut(s) 665
BstV2I GAAGAC 1 cut(s) 173
BstX2I RGATCY 1 cut(s) 342
BstYI RGATCY 1 cut(s) 342
Bsu15I ATCGAT 1 cut(s) 1057
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 4 cut(s) 259, 288, 777, 837
BsuTUI ATCGAT 1 cut(s) 1057
BtsCI GGATG 1 cut(s) 313
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 2 cut(s) 12, 825
Cac8I GCNNGC 2 cut(s) 136, 520
CfoI GCGC 1 cut(s) 507
Cfr10I RCCGGY 1 cut(s) 630
ClaI ATCGAT 1 cut(s) 1057
CseI GACGC 1 cut(s) 304
Csp6I GTAC 5 cut(s) 216, 228, 234, 808, 895
CspAI ACCGGT 1 cut(s) 630
CviAII CATG 6 cut(s) 43, 284, 425, 523, 773, 862
CviQI GTAC 5 cut(s) 216, 228, 234, 808, 895
DdeI CTNAG 4 cut(s) 375, 542, 785, 929
DpnI GATC 5 cut(s) 336, 344, 395, 966, 1056
DpnII GATC 5 cut(s) 334, 342, 393, 964, 1054
EaeI YGGCCR 1 cut(s) 286
Eam1104I CTCTTC 4 cut(s) 28, 383, 918, 1037
EarI CTCTTC 4 cut(s) 28, 383, 918, 1037
Eco130I CCWWGG 1 cut(s) 254
Eco147I AGGCCT 1 cut(s) 259
Eco47III AGCGCT 1 cut(s) 506
EcoRII CCWGG 2 cut(s) 140, 730
EcoT14I CCWWGG 1 cut(s) 254
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 6 cut(s) 46, 287, 428, 526, 776, 865
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FatI CATG 6 cut(s) 42, 283, 424, 522, 772, 861
FauI CCCGC 1 cut(s) 377
FbaI TGATCA 1 cut(s) 964
FblI GTMKAC 2 cut(s) 318, 438
Fnu4HI GCNGC 1 cut(s) 654
FokI GGATG 1 cut(s) 320
Fsp4HI GCNGC 1 cut(s) 654
FspBI CTAG 3 cut(s) 219, 231, 324
GlaI GCGC 1 cut(s) 506
GluI GCNGC 1 cut(s) 654
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 4 cut(s) 259, 288, 777, 837
HapII CCGG 2 cut(s) 265, 631
HgaI GACGC 1 cut(s) 304
HhaI GCGC 1 cut(s) 507
Hin1II CATG 6 cut(s) 46, 287, 428, 526, 776, 865
Hin6I GCGC 1 cut(s) 505
HinP1I GCGC 1 cut(s) 505
HinfI GANTC 7 cut(s) 10, 67, 209, 621, 647, 681, 942
HpaII CCGG 2 cut(s) 265, 631
HphI GGTGA 4 cut(s) 69, 772, 1027, 1058
Hpy166II GTNNAC 3 cut(s) 319, 439, 816
Hpy188I TCNGA 5 cut(s) 334, 347, 686, 703, 798
Hpy188III TCNNGA 5 cut(s) 185, 510, 569, 946, 968
Hpy8I GTNNAC 3 cut(s) 319, 439, 816
HpyAV CCTTC 4 cut(s) 290, 427, 711, 885
HpyCH4III ACNGT 5 cut(s) 121, 469, 617, 820, 887
HpyCH4V TGCA 5 cut(s) 134, 248, 424, 653, 986
HpyF10VI GCNNNNNNNGC 1 cut(s) 135
HpyF3I CTNAG 4 cut(s) 375, 542, 785, 929
Hsp92II CATG 6 cut(s) 46, 287, 428, 526, 776, 865
HspAI GCGC 1 cut(s) 505
Ksp22I TGATCA 1 cut(s) 964
Kzo9I GATC 5 cut(s) 334, 342, 393, 964, 1054
LguI GCTCTTC 2 cut(s) 28, 918
LmnI GCTCC 1 cut(s) 823
Lsp1109I GCAGC 1 cut(s) 665
LweI GCATC 1 cut(s) 361
MaeI CTAG 3 cut(s) 219, 231, 324
MaeIII GTNAC 1 cut(s) 7
MalI GATC 5 cut(s) 336, 344, 395, 966, 1056
MboI GATC 5 cut(s) 334, 342, 393, 964, 1054
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 1 cut(s) 342
MhlI GDGCHC 1 cut(s) 23
MlsI TGGCCA 1 cut(s) 288
MluCI AATT 7 cut(s) 14, 86, 270, 513, 562, 742, 990
MluNI TGGCCA 1 cut(s) 288
MlyI GAGTC 2 cut(s) 4, 61
MmeI TCCRAC 1 cut(s) 1040
MnlI CCTC 8 cut(s) 261, 270, 370, 384, 546, 848, 872, 1040
Mox20I TGGCCA 1 cut(s) 288
MscI TGGCCA 1 cut(s) 288
MseI TTAA 1 cut(s) 114
MslI CAYNNNNRTG 1 cut(s) 1044
Msp20I TGGCCA 1 cut(s) 288
MspA1I CMGCKG 1 cut(s) 656
MspI CCGG 2 cut(s) 265, 631
MspR9I CCNGG 2 cut(s) 142, 732
MunI CAATTG 1 cut(s) 14
Mva1269I GAATGC 1 cut(s) 386
MvaI CCWGG 2 cut(s) 142, 732
MwoI GCNNNNNNNGC 1 cut(s) 135
NdeII GATC 5 cut(s) 334, 342, 393, 964, 1054
NlaIII CATG 6 cut(s) 46, 287, 428, 526, 776, 865
NmuCI GTSAC 1 cut(s) 7
NspI RCATGY 1 cut(s) 46
OliI CACNNNNGTG 1 cut(s) 1044
PasI CCCWGGG 1 cut(s) 141
PceI AGGCCT 1 cut(s) 259
PciI ACATGT 1 cut(s) 42
PciSI GCTCTTC 2 cut(s) 28, 918
PctI GAATGC 1 cut(s) 386
PfeI GAWTC 5 cut(s) 209, 621, 647, 681, 942
PinAI ACCGGT 1 cut(s) 630
PkrI GCNGC 1 cut(s) 655
PleI GAGTC 2 cut(s) 4, 61
PpsI GAGTC 2 cut(s) 4, 61
PscI ACATGT 1 cut(s) 42
Psp6I CCWGG 2 cut(s) 140, 730
PspGI CCWGG 2 cut(s) 140, 730
PstI CTGCAG 1 cut(s) 655
PsuI RGATCY 1 cut(s) 342
PvuII CAGCTG 1 cut(s) 656
RsaI GTAC 5 cut(s) 217, 229, 235, 809, 896
RsaNI GTAC 5 cut(s) 216, 228, 234, 808, 895
RseI CAYNNNNRTG 1 cut(s) 1044
SapI GCTCTTC 2 cut(s) 28, 918
SaqAI TTAA 1 cut(s) 114
SatI GCNGC 1 cut(s) 654
Sau3AI GATC 5 cut(s) 334, 342, 393, 964, 1054
ScaI AGTACT 2 cut(s) 229, 235
SchI GAGTC 2 cut(s) 4, 61
ScrFI CCNGG 2 cut(s) 142, 732
SduI GDGCHC 1 cut(s) 23
SfaNI GCATC 1 cut(s) 361
SfcI CTRYAG 1 cut(s) 651
SmiMI CAYNNNNRTG 1 cut(s) 1044
SmlI CTYRAG 2 cut(s) 479, 508
SmoI CTYRAG 2 cut(s) 479, 508
SpeI ACTAGT 2 cut(s) 218, 230
Sse9I AATT 7 cut(s) 14, 86, 270, 513, 562, 742, 990
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 1 cut(s) 384
SspMI CTAG 3 cut(s) 219, 231, 324
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 2 cut(s) 140, 730
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 5 cut(s) 121, 469, 617, 820, 887
TaqI TCGA 3 cut(s) 619, 947, 1057
TaqII GACCGA 1 cut(s) 368
TasI AATT 7 cut(s) 14, 86, 270, 513, 562, 742, 990
TatI WGTACW 2 cut(s) 227, 233
TfiI GAWTC 5 cut(s) 209, 621, 647, 681, 942
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TscAI CASTG 2 cut(s) 12, 825
TseFI GTSAC 1 cut(s) 7
TseI GCWGC 1 cut(s) 653
Tsp45I GTSAC 1 cut(s) 7
TspRI CASTG 2 cut(s) 12, 825
XapI RAATTY 2 cut(s) 562, 742
XceI RCATGY 1 cut(s) 46
XmiI GTMKAC 2 cut(s) 318, 438
XspI CTAG 3 cut(s) 219, 231, 324
ZrmI AGTACT 2 cut(s) 229, 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.