Rh7BG163300
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0007506
Physical Location & Seq
Forward (+)
12651954 .. 12654120
2167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG163300.1

Sequence Viewer

Length: 999 bp
ATGCAACTCTTTCTTCACCTATCCAATTTTCTCAACAAAGGGTTGTTAGTTTTAATACAGTTATATGCTGTGCAAGCCCCAGGGATACTATTGAACATTCTGGTAATGGGTTTGGTGGTCTTCCTGAAAAACTGTACTCTTAGAGAATCAGGTACTAGAAGTAGTACTAGTACTAATAAAGTTCCACCTCCAAGGCCTCGCCGGATAATTTTGGTTCGGCATGGGCAGAGTGAAGGAAATGTGGATGAGAGCGTCTACACTAGAGTTTCTAATCCAAAGATCCGATTGACCGAGAAAGGTATGGCTGATGCTGAGGAATGCGGGAAGAGGATCAGGGAGATGATTGAAAAAAGACAAGTGCATGATTGGAAGGTCTACTTCTATGTGTCTCCTTATAGAAGAACAGTTGAAACACTCAAGGGGTTAGGGAAAGCATTTGAGCGCTCAAGAATTGCTGGCATGAGAGAAGAACCTCGCTTAAGAGAGCAAGATTTTGGGAATTTTCAGGATAGGGAGAAGATGAGACTTGATAAAGCTATGCGTATGCTTTACGGTCGATTCTTTTACCGGTTTCCTAATGGGGAATCTGCAGCTGATGTTTATGATAGGATTACAGGATTCAGAGAAACATTGAAATCGGATATCGAAGAGGGAAGGTTTCAGCCACCAGGGGAGAGAAATTCAAACATCAACTTGGTGATAGTTTCGCATTGCCTAACGCTGAGAGTGTTTCTGATGAGATGGTACAAGTGGACAGTGGAGCAGTTTGATGGCCTCAACAACTTTGGTAATGGAAGCATGATTGTTATGGAAAGAGGCTACGGTGGAAGGTACAGCTTGTCAATACACCACACAGAAGAAGAGCTAAGAGAGTTTGGATTCTCGAACGAAATGATAGTTGATCAGGAATGGCAAAAATATGCAAGAATTGGAGAGCTGAACTATGATTGTCCAACGCTAAACTCCTTCTTCACCCACTTTGGTGAAGATGATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

332

Amino Acids

38.87

Weight (kDa)

9.05

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 69 - 277 2.5e-27 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 255, 375
AciI CCGC 1 cut(s) 321
AclWI GGATC 2 cut(s) 274, 338
AcsI RAATTY 2 cut(s) 499, 679
AfaI GTAC 6 cut(s) 136, 154, 166, 172, 746, 833
AfeI AGCGCT 1 cut(s) 443
AflII CTTAAG 1 cut(s) 478
AgeI ACCGGT 1 cut(s) 567
AgsI TTSAA 5 cut(s) 94, 347, 410, 634, 684
AhlI ACTAGT 1 cut(s) 167
AjnI CCWGG 2 cut(s) 79, 667
AleI CACNNNNGTG 1 cut(s) 981
AluBI AGCT 5 cut(s) 536, 593, 837, 865, 937
AluI AGCT 5 cut(s) 536, 593, 837, 865, 937
Alw26I GTCTC 2 cut(s) 393, 517
AlwI GGATC 2 cut(s) 274, 338
Aor51HI AGCGCT 1 cut(s) 443
AoxI GGCC 2 cut(s) 194, 772
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 2 cut(s) 499, 679
AsiGI ACCGGT 1 cut(s) 567
AspLEI GCGC 1 cut(s) 444
AsuHPI GGTGA 4 cut(s) 8, 709, 964, 995
BbsI GAAGAC 1 cut(s) 112
BbvCI CCTCAGC 1 cut(s) 312
BbvI GCAGC 1 cut(s) 602
BccI CCATC 2 cut(s) 735, 764
BciT130I CCWGG 2 cut(s) 81, 669
BciVI GTATCC 1 cut(s) 78
BclI TGATCA 1 cut(s) 901
BcoDI GTCTC 2 cut(s) 393, 517
BcuI ACTAGT 1 cut(s) 167
BfaI CTAG 3 cut(s) 156, 168, 261
BfmI CTRYAG 1 cut(s) 588
BfoI RGCGCY 1 cut(s) 445
BfrI CTTAAG 1 cut(s) 478
BfuI GTATCC 1 cut(s) 78
BisI GCNGC 1 cut(s) 591
BlsI GCNGC 1 cut(s) 592
BmcAI AGTACT 2 cut(s) 166, 172
Bme1390I CCNGG 2 cut(s) 81, 669
BmrFI CCNGG 2 cut(s) 81, 669
BmsI GCATC 1 cut(s) 298
BpiI GAAGAC 1 cut(s) 112
Bpu10I CCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 401, 430
Bsa29I ATCGAT 1 cut(s) 994
BsaJI CCNNGG 4 cut(s) 79, 80, 191, 668
BsaWI WCCGGW 1 cut(s) 567
Bse118I RCCGGY 1 cut(s) 567
Bse3DI GCAATG 1 cut(s) 709
BseBI CCWGG 2 cut(s) 81, 669
BseCI ATCGAT 1 cut(s) 994
BseDI CCNNGG 4 cut(s) 79, 80, 191, 668
BseGI GGATG 1 cut(s) 250
BseMI GCAATG 1 cut(s) 709
BseMII CTCAG 2 cut(s) 303, 713
BseXI GCAGC 1 cut(s) 602
Bsh1285I CGRYCG 1 cut(s) 556
BshFI GGCC 2 cut(s) 196, 774
BshTI ACCGGT 1 cut(s) 567
BshVI ATCGAT 1 cut(s) 994
BsiEI CGRYCG 1 cut(s) 556
BsiSI CCGG 2 cut(s) 202, 568
BsmAI GTCTC 2 cut(s) 393, 517
BsmI GAATGC 1 cut(s) 323
BsnI GGCC 2 cut(s) 196, 774
Bsp143I GATC 4 cut(s) 279, 330, 901, 991
BspACI CCGC 1 cut(s) 321
BspANI GGCC 2 cut(s) 196, 774
BspCNI CTCAG 2 cut(s) 304, 714
BspDI ATCGAT 1 cut(s) 994
BspMAI CTGCAG 1 cut(s) 592
BspPI GGATC 2 cut(s) 274, 338
BspQI GCTCTTC 1 cut(s) 855
BspTI CTTAAG 1 cut(s) 478
BsrDI GCAATG 1 cut(s) 709
BsrFI RCCGGY 1 cut(s) 567
BssAI RCCGGY 1 cut(s) 567
BssECI CCNNGG 4 cut(s) 79, 80, 191, 668
BssMI GATC 4 cut(s) 279, 330, 901, 991
BssT1I CCWWGG 1 cut(s) 191
Bst2UI CCWGG 2 cut(s) 81, 669
Bst4CI ACNGT 6 cut(s) 60, 134, 406, 554, 757, 824
Bst6I CTCTTC 3 cut(s) 320, 642, 855
BstAFI CTTAAG 1 cut(s) 478
BstC8I GCNNGC 2 cut(s) 75, 457
BstDEI CTNAG 4 cut(s) 140, 312, 722, 866
BstF5I GGATG 1 cut(s) 250
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 1 cut(s) 444
BstKTI GATC 4 cut(s) 282, 333, 904, 994
BstMAI GTCTC 2 cut(s) 393, 517
BstMBI GATC 4 cut(s) 279, 330, 901, 991
BstMCI CGRYCG 1 cut(s) 556
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstNI CCWGG 2 cut(s) 81, 669
BstSCI CCNGG 2 cut(s) 79, 667
BstSFI CTRYAG 1 cut(s) 588
BstV1I GCAGC 1 cut(s) 602
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 1 cut(s) 279
BstYI RGATCY 1 cut(s) 279
Bsu15I ATCGAT 1 cut(s) 994
BsuI GTATCC 1 cut(s) 78
BsuRI GGCC 2 cut(s) 196, 774
BsuTUI ATCGAT 1 cut(s) 994
BtsCI GGATG 1 cut(s) 250
BtsIMutI CAGTG 1 cut(s) 762
Cac8I GCNNGC 2 cut(s) 75, 457
CfoI GCGC 1 cut(s) 444
Cfr10I RCCGGY 1 cut(s) 567
ClaI ATCGAT 1 cut(s) 994
CseI GACGC 1 cut(s) 241
Csp6I GTAC 6 cut(s) 135, 153, 165, 171, 745, 832
CspAI ACCGGT 1 cut(s) 567
CviAII CATG 4 cut(s) 221, 362, 460, 799
CviQI GTAC 6 cut(s) 135, 153, 165, 171, 745, 832
DdeI CTNAG 4 cut(s) 140, 312, 722, 866
DpnI GATC 4 cut(s) 281, 332, 903, 993
DpnII GATC 4 cut(s) 279, 330, 901, 991
Eam1104I CTCTTC 3 cut(s) 320, 642, 855
EarI CTCTTC 3 cut(s) 320, 642, 855
Eco130I CCWWGG 1 cut(s) 191
Eco147I AGGCCT 1 cut(s) 196
Eco32I GATATC 1 cut(s) 643
Eco47III AGCGCT 1 cut(s) 443
EcoRII CCWGG 2 cut(s) 79, 667
EcoRV GATATC 1 cut(s) 643
EcoT14I CCWWGG 1 cut(s) 191
ErhI CCWWGG 1 cut(s) 191
FaeI CATG 4 cut(s) 224, 365, 463, 802
FalI AAGNNNNNCTT 2 cut(s) 362, 394
FatI CATG 4 cut(s) 220, 361, 459, 798
FauI CCCGC 1 cut(s) 314
FbaI TGATCA 1 cut(s) 901
FblI GTMKAC 2 cut(s) 255, 375
Fnu4HI GCNGC 1 cut(s) 591
FokI GGATG 1 cut(s) 257
Fsp4HI GCNGC 1 cut(s) 591
FspBI CTAG 3 cut(s) 156, 168, 261
GlaI GCGC 1 cut(s) 443
GluI GCNGC 1 cut(s) 591
HaeII RGCGCY 1 cut(s) 445
HaeIII GGCC 2 cut(s) 196, 774
HapII CCGG 2 cut(s) 202, 568
HgaI GACGC 1 cut(s) 241
HhaI GCGC 1 cut(s) 444
Hin1II CATG 4 cut(s) 224, 365, 463, 802
Hin6I GCGC 1 cut(s) 442
HinP1I GCGC 1 cut(s) 442
HinfI GANTC 5 cut(s) 146, 558, 584, 618, 879
HpaII CCGG 2 cut(s) 202, 568
HphI GGTGA 4 cut(s) 8, 709, 964, 995
Hpy166II GTNNAC 3 cut(s) 256, 376, 753
Hpy188I TCNGA 4 cut(s) 284, 623, 640, 735
Hpy188III TCNNGA 5 cut(s) 124, 447, 506, 883, 905
Hpy8I GTNNAC 3 cut(s) 256, 376, 753
HpyAV CCTTC 5 cut(s) 227, 364, 648, 822, 976
HpyCH4III ACNGT 6 cut(s) 60, 134, 406, 554, 757, 824
HpyCH4V TGCA 5 cut(s) 4, 73, 361, 590, 923
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpyF3I CTNAG 4 cut(s) 140, 312, 722, 866
Hsp92II CATG 4 cut(s) 224, 365, 463, 802
HspAI GCGC 1 cut(s) 442
Ksp22I TGATCA 1 cut(s) 901
Kzo9I GATC 4 cut(s) 279, 330, 901, 991
LguI GCTCTTC 1 cut(s) 855
LmnI GCTCC 1 cut(s) 760
Lsp1109I GCAGC 1 cut(s) 602
LweI GCATC 1 cut(s) 298
MaeI CTAG 3 cut(s) 156, 168, 261
MalI GATC 4 cut(s) 281, 332, 903, 993
MboI GATC 4 cut(s) 279, 330, 901, 991
MflI RGATCY 1 cut(s) 279
MluCI AATT 6 cut(s) 25, 207, 450, 499, 679, 927
MmeI TCCRAC 1 cut(s) 977
MnlI CCTC 8 cut(s) 198, 207, 307, 321, 483, 643, 785, 809
MseI TTAA 2 cut(s) 53, 479
MslI CAYNNNNRTG 1 cut(s) 981
MspA1I CMGCKG 1 cut(s) 593
MspCI CTTAAG 1 cut(s) 478
MspI CCGG 2 cut(s) 202, 568
MspR9I CCNGG 2 cut(s) 81, 669
Mva1269I GAATGC 1 cut(s) 323
MvaI CCWGG 2 cut(s) 81, 669
MwoI GCNNNNNNNGC 1 cut(s) 74
NdeII GATC 4 cut(s) 279, 330, 901, 991
NlaIII CATG 4 cut(s) 224, 365, 463, 802
OliI CACNNNNGTG 1 cut(s) 981
PasI CCCWGGG 1 cut(s) 80
PceI AGGCCT 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 855
PctI GAATGC 1 cut(s) 323
PfeI GAWTC 5 cut(s) 146, 558, 584, 618, 879
PinAI ACCGGT 1 cut(s) 567
PkrI GCNGC 1 cut(s) 592
Psp6I CCWGG 2 cut(s) 79, 667
PspGI CCWGG 2 cut(s) 79, 667
PstI CTGCAG 1 cut(s) 592
PsuI RGATCY 1 cut(s) 279
PvuII CAGCTG 1 cut(s) 593
RsaI GTAC 6 cut(s) 136, 154, 166, 172, 746, 833
RsaNI GTAC 6 cut(s) 135, 153, 165, 171, 745, 832
RseI CAYNNNNRTG 1 cut(s) 981
SapI GCTCTTC 1 cut(s) 855
SaqAI TTAA 2 cut(s) 53, 479
SatI GCNGC 1 cut(s) 591
Sau3AI GATC 4 cut(s) 279, 330, 901, 991
ScaI AGTACT 2 cut(s) 166, 172
ScrFI CCNGG 2 cut(s) 81, 669
SfaNI GCATC 1 cut(s) 298
SfcI CTRYAG 1 cut(s) 588
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 3 cut(s) 416, 445, 478
SmoI CTYRAG 3 cut(s) 416, 445, 478
SpeI ACTAGT 1 cut(s) 167
Sse9I AATT 6 cut(s) 25, 207, 450, 499, 679, 927
SseBI AGGCCT 1 cut(s) 196
SsiI CCGC 1 cut(s) 321
SspMI CTAG 3 cut(s) 156, 168, 261
StuI AGGCCT 1 cut(s) 196
StyD4I CCNGG 2 cut(s) 79, 667
StyI CCWWGG 1 cut(s) 191
TaaI ACNGT 6 cut(s) 60, 134, 406, 554, 757, 824
TaqI TCGA 4 cut(s) 556, 645, 884, 994
TaqII GACCGA 1 cut(s) 305
TasI AATT 6 cut(s) 25, 207, 450, 499, 679, 927
TatI WGTACW 3 cut(s) 134, 164, 170
TfiI GAWTC 5 cut(s) 146, 558, 584, 618, 879
Tru1I TTAA 2 cut(s) 53, 479
Tru9I TTAA 2 cut(s) 53, 479
TscAI CASTG 1 cut(s) 762
TseI GCWGC 1 cut(s) 590
TspRI CASTG 1 cut(s) 762
Vha464I CTTAAG 1 cut(s) 478
XapI RAATTY 2 cut(s) 499, 679
XmiI GTMKAC 2 cut(s) 255, 375
XspI CTAG 3 cut(s) 156, 168, 261
ZrmI AGTACT 2 cut(s) 166, 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.