Prupe.5G155900_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0008917
Physical Location & Seq
Forward (+)
13923161 .. 13925292
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G155900.1

Sequence Viewer

Length: 1026 bp
ATGAAGTTGTTTAAGTCTTTGGGATTTTCAGGCGCTAGCCTTGCCAAAATGCTTAATAAACACCCACTAGTGCTTGAGAGTGATGCTCAAACGGTGTTTGAGCTCTTTAGAAGTCATGGTTTCAGTGAAAAGGATATAAAAACCTTGACCATGAGGCTTCCTAAATTGTTTATATACGATGCAAAGAAGACTATAAAGCCAAAGATCGAGTTTTTGAAATCTTTGGGGCTTTCAGAGCTATACATTGCCAAACTTTTATCCAATGAGCCTTATGTTCTAGCAAGGAGCCTTGAAAACCACATCATTCCAAGTGTTCAAGCGCTTGTGCGGTTTCTTGGCAGTGATGTGAGTGCCTCAAAGGCTATAAAGGGATGCCACCGGATGCTTGAATATAATTTCGAAAAGGTACTTGACCCGAACGTATCAATCTTTAGGAGCCATGGTGTACCTGAGTCACTTATTGTGAAAATGTTCTTAATTAATCCAAGAACGTTGCTTCTGAAGGGTTCTAGAGTTAGTGAGATTATTGGTGATGTTAAAGAGTTGGGGTTTGATCCCAACAAAATGCTATTTGCTCTAGCTGTTTGTACCATGGCAAGGATGAGTAAGGCATGCTGGGAGCAGAAGTTGGAAACCTATAGAAGTTTAGGTTTGTCAAAAGATGAGATTTATTCAGCATTCAGAAAGCAACCCATGTGTATGATTAATTCGGTGAAGAAGATCCGTAAGTTGATGCCTTTCTTCATGAATAAATTGAATCTGAAGCCATCGATGATTTCCAAGAATCCAGACATTTTACTGTTTAGCTTGGAGAAGAGAATTATTCCTAGGTGCTCAGTTCTACAACTTTTGTTGTCACAGGGGTTCATTAAGGAAGATGTTAAATTTCCTCATGTGCTCAAGATGACTAATAAGAATTTCAGGCGGAGAATTTTGAGCAAGTATGAAGCAGTGGTTCCTGATATCGTCAAGGCATACAAAGGCAAGATAGAATTTCAAGGGTTTTCGAGTTCCTTTAATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

342

Amino Acids

39.0

Weight (kDa)

9.89

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 328, 925
AclI AACGTT 1 cut(s) 491
AclWI GGATC 2 cut(s) 548, 715
AcsI RAATTY 4 cut(s) 884, 916, 930, 992
AcuI CTGAAG 2 cut(s) 521, 782
AfaI GTAC 3 cut(s) 408, 447, 589
AfeI AGCGCT 1 cut(s) 321
AfiI CCNNNNNNNGG 1 cut(s) 597
AgsI TTSAA 6 cut(s) 217, 293, 317, 389, 757, 998
AhlI ACTAGT 1 cut(s) 67
AluBI AGCT 4 cut(s) 103, 238, 581, 807
AluI AGCT 4 cut(s) 103, 238, 581, 807
Alw21I GWGCWC 3 cut(s) 105, 836, 900
AlwI GGATC 2 cut(s) 548, 715
Aor51HI AGCGCT 1 cut(s) 321
ApoI RAATTY 4 cut(s) 884, 916, 930, 992
AseI ATTAAT 2 cut(s) 480, 705
Asp700I GAANNNNTTC 1 cut(s) 470
AspA2I CCTAGG 1 cut(s) 827
AspLEI GCGC 2 cut(s) 35, 322
AsuHPI GGTGA 2 cut(s) 542, 724
AsuII TTCGAA 1 cut(s) 399
AsuNHI GCTAGC 1 cut(s) 35
AvrII CCTAGG 1 cut(s) 827
BanII GRGCYC 1 cut(s) 105
BbsI GAAGAC 1 cut(s) 194
Bbv12I GWGCWC 3 cut(s) 105, 836, 900
BccI CCATC 1 cut(s) 775
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 6 cut(s) 36, 68, 278, 510, 578, 828
BfmI CTRYAG 1 cut(s) 637
BfoI RGCGCY 2 cut(s) 36, 323
BglI GCCNNNNNGGC 1 cut(s) 359
BlnI CCTAGG 1 cut(s) 827
BmiI GGNNCC 3 cut(s) 287, 437, 957
BmsI GCATC 5 cut(s) 73, 169, 362, 372, 723
BmtI GCTAGC 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 194
BplI GAGNNNNNCTC 2 cut(s) 70, 102
Bpu14I TTCGAA 1 cut(s) 399
BpuEI CTTGAG 2 cut(s) 95, 884
Bsa29I ATCGAT 1 cut(s) 770
BsaJI CCNNGG 3 cut(s) 439, 591, 827
BsaWI WCCGGW 1 cut(s) 378
BsaXI ACNNNNNCTCC 4 cut(s) 427, 457, 611, 641
Bsc4I CCNNNNNNNGG 1 cut(s) 597
Bse3DI GCAATG 1 cut(s) 243
BseCI ATCGAT 1 cut(s) 770
BseDI CCNNGG 3 cut(s) 439, 591, 827
BseGI GGATG 3 cut(s) 377, 387, 606
BseLI CCNNNNNNNGG 1 cut(s) 597
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 2 cut(s) 441, 849
BseYI CCCAGC 1 cut(s) 615
BshVI ATCGAT 1 cut(s) 770
BsiHKAI GWGCWC 3 cut(s) 105, 836, 900
BsiSI CCGG 1 cut(s) 379
BslI CCNNNNNNNGG 1 cut(s) 597
BsmI GAATGC 1 cut(s) 677
Bsp119I TTCGAA 1 cut(s) 399
Bsp1286I GDGCHC 3 cut(s) 105, 836, 900
Bsp143I GATC 3 cut(s) 204, 553, 720
Bsp19I CCATGG 2 cut(s) 439, 591
BspACI CCGC 2 cut(s) 328, 925
BspCNI CTCAG 2 cut(s) 442, 848
BspDI ATCGAT 1 cut(s) 770
BspHI TCATGA 1 cut(s) 744
BspLI GGNNCC 3 cut(s) 287, 437, 957
BspOI GCTAGC 1 cut(s) 39
BspPI GGATC 2 cut(s) 548, 715
BspT104I TTCGAA 1 cut(s) 399
BsrDI GCAATG 1 cut(s) 243
BssECI CCNNGG 3 cut(s) 439, 591, 827
BssMI GATC 3 cut(s) 204, 553, 720
BssT1I CCWWGG 3 cut(s) 439, 591, 827
Bst4CI ACNGT 2 cut(s) 94, 801
Bst6I CTCTTC 1 cut(s) 809
BstBI TTCGAA 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 37, 613
BstDEI CTNAG 2 cut(s) 450, 835
BstDSI CCRYGG 2 cut(s) 439, 591
BstF5I GGATG 3 cut(s) 377, 387, 606
BstH2I RGCGCY 2 cut(s) 36, 323
BstHHI GCGC 2 cut(s) 35, 322
BstKTI GATC 3 cut(s) 207, 556, 723
BstMBI GATC 3 cut(s) 204, 553, 720
BstMWI GCNNNNNNNGC 3 cut(s) 41, 235, 359
BstNSI RCATGY 1 cut(s) 615
BstSFI CTRYAG 1 cut(s) 637
BstV2I GAAGAC 1 cut(s) 194
BstX2I RGATCY 1 cut(s) 720
BstYI RGATCY 1 cut(s) 720
Bsu15I ATCGAT 1 cut(s) 770
BsuTUI ATCGAT 1 cut(s) 770
BtgI CCRYGG 2 cut(s) 439, 591
BtsCI GGATG 3 cut(s) 377, 387, 606
BtsI GCAGTG 2 cut(s) 346, 957
BtsIMutI CAGTG 3 cut(s) 130, 346, 957
Cac8I GCNNGC 2 cut(s) 37, 613
CciI TCATGA 1 cut(s) 744
CfoI GCGC 2 cut(s) 35, 322
ClaI ATCGAT 1 cut(s) 770
Csp6I GTAC 3 cut(s) 407, 446, 588
CviAII CATG 8 cut(s) 116, 151, 440, 592, 612, 694, 745, 893
CviQI GTAC 3 cut(s) 407, 446, 588
DdeI CTNAG 2 cut(s) 450, 835
DpnI GATC 3 cut(s) 206, 555, 722
DpnII GATC 3 cut(s) 204, 553, 720
Eam1104I CTCTTC 1 cut(s) 809
EarI CTCTTC 1 cut(s) 809
EciI GGCGGA 1 cut(s) 940
Ecl136II GAGCTC 1 cut(s) 103
Eco130I CCWWGG 3 cut(s) 439, 591, 827
Eco24I GRGCYC 1 cut(s) 105
Eco32I GATATC 1 cut(s) 964
Eco47III AGCGCT 1 cut(s) 321
Eco53kI GAGCTC 1 cut(s) 103
Eco57I CTGAAG 2 cut(s) 521, 782
EcoICRI GAGCTC 1 cut(s) 103
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 3 cut(s) 439, 591, 827
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 3 cut(s) 439, 591, 827
FaeI CATG 8 cut(s) 119, 154, 443, 595, 615, 697, 748, 896
FatI CATG 8 cut(s) 115, 150, 439, 591, 611, 693, 744, 892
FokI GGATG 3 cut(s) 384, 394, 613
FriOI GRGCYC 1 cut(s) 105
FspBI CTAG 6 cut(s) 36, 68, 278, 510, 578, 828
GlaI GCGC 2 cut(s) 34, 321
GsaI CCCAGC 1 cut(s) 619
HaeII RGCGCY 2 cut(s) 36, 323
HapII CCGG 1 cut(s) 379
HhaI GCGC 2 cut(s) 35, 322
Hin1II CATG 8 cut(s) 119, 154, 443, 595, 615, 697, 748, 896
Hin6I GCGC 2 cut(s) 33, 320
HinP1I GCGC 2 cut(s) 33, 320
HinfI GANTC 3 cut(s) 452, 757, 784
HpaII CCGG 1 cut(s) 379
HphI GGTGA 2 cut(s) 542, 724
Hpy166II GTNNAC 1 cut(s) 446
Hpy188I TCNGA 4 cut(s) 235, 501, 683, 762
Hpy188III TCNNGA 5 cut(s) 510, 745, 788, 901, 959
Hpy8I GTNNAC 1 cut(s) 446
HpyAV CCTTC 1 cut(s) 496
HpyCH4III ACNGT 2 cut(s) 94, 801
HpyCH4IV ACGT 2 cut(s) 420, 491
HpyCH4V TGCA 1 cut(s) 182
HpyF10VI GCNNNNNNNGC 3 cut(s) 41, 235, 359
HpyF3I CTNAG 2 cut(s) 450, 835
HpySE526I ACGT 2 cut(s) 420, 491
Hsp92II CATG 8 cut(s) 119, 154, 443, 595, 615, 697, 748, 896
HspAI GCGC 2 cut(s) 33, 320
Kzo9I GATC 3 cut(s) 204, 553, 720
LmnI GCTCC 3 cut(s) 285, 435, 619
LpnPI CCDG 8 cut(s) 15, 392, 462, 601, 801, 845, 907, 972
LweI GCATC 5 cut(s) 73, 169, 362, 372, 723
MaeI CTAG 6 cut(s) 36, 68, 278, 510, 578, 828
MaeII ACGT 2 cut(s) 420, 491
MaeIII GTNAC 2 cut(s) 453, 855
MalI GATC 3 cut(s) 206, 555, 722
MboI GATC 3 cut(s) 204, 553, 720
MboII GAAGA 6 cut(s) 199, 727, 730, 733, 826, 887
MflI RGATCY 1 cut(s) 720
MhlI GDGCHC 3 cut(s) 105, 836, 900
MlyI GAGTC 1 cut(s) 461
MmeI TCCRAC 1 cut(s) 609
MnlI CCTC 3 cut(s) 147, 364, 900
MroXI GAANNNNTTC 1 cut(s) 470
MseI TTAA 9 cut(s) 12, 54, 476, 480, 537, 705, 870, 882, 1017
MslI CAYNNNNRTG 1 cut(s) 698
MspI CCGG 1 cut(s) 379
Mva1269I GAATGC 1 cut(s) 677
MwoI GCNNNNNNNGC 3 cut(s) 41, 235, 359
NcoI CCATGG 2 cut(s) 439, 591
NdeII GATC 3 cut(s) 204, 553, 720
NheI GCTAGC 1 cut(s) 35
NlaIII CATG 8 cut(s) 119, 154, 443, 595, 615, 697, 748, 896
NlaIV GGNNCC 3 cut(s) 287, 437, 957
NmuCI GTSAC 2 cut(s) 453, 855
NspI RCATGY 1 cut(s) 615
NspV TTCGAA 1 cut(s) 399
PacI TTAATTAA 1 cut(s) 480
PaeI GCATGC 1 cut(s) 615
PagI TCATGA 1 cut(s) 744
PctI GAATGC 1 cut(s) 677
PdmI GAANNNNTTC 1 cut(s) 470
PfeI GAWTC 2 cut(s) 757, 784
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
PshBI ATTAAT 2 cut(s) 480, 705
Psp124BI GAGCTC 1 cut(s) 105
Psp1406I AACGTT 1 cut(s) 491
PspFI CCCAGC 1 cut(s) 615
PspN4I GGNNCC 3 cut(s) 287, 437, 957
PsuI RGATCY 1 cut(s) 720
RsaI GTAC 3 cut(s) 408, 447, 589
RsaNI GTAC 3 cut(s) 407, 446, 588
RseI CAYNNNNRTG 1 cut(s) 698
SacI GAGCTC 1 cut(s) 105
SaqAI TTAA 9 cut(s) 12, 54, 476, 480, 537, 705, 870, 882, 1017
Sau3AI GATC 3 cut(s) 204, 553, 720
SchI GAGTC 1 cut(s) 461
SduI GDGCHC 3 cut(s) 105, 836, 900
SfaNI GCATC 5 cut(s) 73, 169, 362, 372, 723
SfcI CTRYAG 1 cut(s) 637
SfuI TTCGAA 1 cut(s) 399
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 2 cut(s) 74, 899
SmoI CTYRAG 2 cut(s) 74, 899
SpeI ACTAGT 1 cut(s) 67
SphI GCATGC 1 cut(s) 615
SsiI CCGC 2 cut(s) 328, 925
SspMI CTAG 6 cut(s) 36, 68, 278, 510, 578, 828
SstI GAGCTC 1 cut(s) 105
StyI CCWWGG 3 cut(s) 439, 591, 827
TaaI ACNGT 2 cut(s) 94, 801
TaiI ACGT 2 cut(s) 423, 494
TaqI TCGA 4 cut(s) 207, 399, 770, 1007
TfiI GAWTC 2 cut(s) 757, 784
Tru1I TTAA 9 cut(s) 12, 54, 476, 480, 537, 705, 870, 882, 1017
Tru9I TTAA 9 cut(s) 12, 54, 476, 480, 537, 705, 870, 882, 1017
TscAI CASTG 3 cut(s) 130, 346, 957
TseFI GTSAC 2 cut(s) 453, 855
Tsp45I GTSAC 2 cut(s) 453, 855
TspDTI ATGAA 5 cut(s) 17, 733, 761, 856, 960
TspGWI ACGGA 1 cut(s) 713
TspRI CASTG 3 cut(s) 130, 346, 957
VspI ATTAAT 2 cut(s) 480, 705
XapI RAATTY 4 cut(s) 884, 916, 930, 992
XbaI TCTAGA 1 cut(s) 509
XceI RCATGY 1 cut(s) 615
XmaJI CCTAGG 1 cut(s) 827
XmnI GAANNNNTTC 1 cut(s) 470
XspI CTAG 6 cut(s) 36, 68, 278, 510, 578, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.