Rh7CG116800
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
8976419 .. 8976802
384 bp
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UTR
Exon/CDS
Intron
Rh7CG116800.1

Sequence Viewer

Length: 384 bp
ATGCCTACATGTTCTCCCAAACCCTCGAATTCCTCAGACCCACAATGGTTTACAGTCTCGTACCTCCAAAATTCATGTGGGCTGTCCTTAGAATCCGCCATTTCAGCTGCCCAGAAGCTTCAGATTGAATCCAAACACACCCCTGACTCGGTTCTGAGCCTATTCAGAACCCACGGATTGAATCAAACCCACATCAGGAACATAATATCTAAACGTCCATTGTTGCTTTTGGCTGGTTTAGATGGAAAAATTAGGCCCAATTTGGAGTTGCTGAACTCCTTGGGGTTGCTCAAGTGGTTCTTAAAGACCCAATTGTGCTTGAGAGTGATGCATAATCTGTGCTTGAGTTTTTTAGAAATCATGGTTTTAGTGAAAAGGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.28

Weight (kDa)

9.64

Isoelectric Point (pI)

58.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 96
AcsI RAATTY 2 cut(s) 28, 70
AcuI CTGAAG 1 cut(s) 104
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 2 cut(s) 148, 195
AflIII ACRYGT 1 cut(s) 8
AgsI TTSAA 2 cut(s) 128, 181
AluBI AGCT 2 cut(s) 107, 118
AluI AGCT 2 cut(s) 107, 118
Alw26I GTCTC 1 cut(s) 61
AoxI GGCC 1 cut(s) 254
ApeKI GCWGC 1 cut(s) 107
ApoI RAATTY 2 cut(s) 28, 70
AspS9I GGNCC 1 cut(s) 255
BbvI GCAGC 1 cut(s) 94
BccI CCATC 1 cut(s) 236
BcoDI GTCTC 1 cut(s) 61
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
BmgT120I GGNCC 1 cut(s) 255
BmsI GCATC 1 cut(s) 318
BpuEI CTTGAG 3 cut(s) 275, 340, 364
BsaJI CCNNGG 2 cut(s) 172, 279
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 195
BseDI CCNNGG 2 cut(s) 172, 279
BseLI CCNNNNNNNGG 2 cut(s) 148, 195
BseMII CTCAG 2 cut(s) 48, 146
BseXI GCAGC 1 cut(s) 94
BshFI GGCC 1 cut(s) 256
BslI CCNNNNNNNGG 2 cut(s) 148, 195
BsmAI GTCTC 1 cut(s) 61
BsnI GGCC 1 cut(s) 256
BspACI CCGC 1 cut(s) 96
BspANI GGCC 1 cut(s) 256
BspCNI CTCAG 2 cut(s) 47, 147
BssECI CCNNGG 2 cut(s) 172, 279
BssT1I CCWWGG 1 cut(s) 279
Bst4CI ACNGT 1 cut(s) 55
BstDEI CTNAG 3 cut(s) 34, 88, 155
BstDSI CCRYGG 1 cut(s) 172
BstMAI GTCTC 1 cut(s) 61
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstNSI RCATGY 1 cut(s) 12
BstV1I GCAGC 1 cut(s) 94
BsuRI GGCC 1 cut(s) 256
BtgI CCRYGG 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 255
Csp6I GTAC 1 cut(s) 61
CviAII CATG 3 cut(s) 9, 75, 361
CviJI RGCY 6 cut(s) 82, 107, 118, 159, 233, 256
CviKI_1 RGCY 6 cut(s) 82, 107, 118, 159, 233, 256
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 3 cut(s) 34, 88, 155
EciI GGCGGA 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 279
Eco57I CTGAAG 1 cut(s) 104
EcoRI GAATTC 1 cut(s) 28
EcoT14I CCWWGG 1 cut(s) 279
EcoT22I ATGCAT 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 3 cut(s) 12, 78, 364
FaiI YATR 6 cut(s) 10, 76, 203, 333, 362, 382
FalI AAGNNNNNCTT 2 cut(s) 284, 316
FatI CATG 3 cut(s) 8, 74, 360
Fnu4HI GCNGC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 108
HaeIII GGCC 1 cut(s) 256
Hin1II CATG 3 cut(s) 12, 78, 364
HindIII AAGCTT 1 cut(s) 116
HinfI GANTC 4 cut(s) 92, 128, 146, 181
Hpy166II GTNNAC 1 cut(s) 51
Hpy188I TCNGA 4 cut(s) 37, 123, 156, 167
Hpy188III TCNNGA 1 cut(s) 196
Hpy8I GTNNAC 1 cut(s) 51
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4IV ACGT 1 cut(s) 214
HpyCH4V TGCA 1 cut(s) 331
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpyF3I CTNAG 3 cut(s) 34, 88, 155
HpySE526I ACGT 1 cut(s) 214
Hsp92II CATG 3 cut(s) 12, 78, 364
LpnPI CCDG 4 cut(s) 125, 156, 181, 219
Lsp1109I GCAGC 1 cut(s) 94
LweI GCATC 1 cut(s) 318
MaeII ACGT 1 cut(s) 214
MfeI CAATTG 1 cut(s) 311
MluCI AATT 5 cut(s) 28, 70, 249, 259, 311
MlyI GAGTC 1 cut(s) 140
MnlI CCTC 3 cut(s) 34, 43, 74
Mph1103I ATGCAT 1 cut(s) 333
MseI TTAA 1 cut(s) 302
MspA1I CMGCKG 1 cut(s) 107
MunI CAATTG 1 cut(s) 311
MwoI GCNNNNNNNGC 1 cut(s) 104
NlaIII CATG 3 cut(s) 12, 78, 364
NsiI ATGCAT 1 cut(s) 333
NspI RCATGY 1 cut(s) 12
PciI ACATGT 1 cut(s) 8
PfeI GAWTC 3 cut(s) 92, 128, 181
PkrI GCNGC 1 cut(s) 109
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
PscI ACATGT 1 cut(s) 8
PspPI GGNCC 1 cut(s) 255
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SaqAI TTAA 1 cut(s) 302
SatI GCNGC 1 cut(s) 108
Sau96I GGNCC 1 cut(s) 255
SchI GAGTC 1 cut(s) 140
SetI ASST 4 cut(s) 66, 109, 120, 217
SfaNI GCATC 1 cut(s) 318
SmlI CTYRAG 3 cut(s) 290, 319, 343
SmoI CTYRAG 3 cut(s) 290, 319, 343
Sse9I AATT 5 cut(s) 28, 70, 249, 259, 311
SsiI CCGC 1 cut(s) 96
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 1 cut(s) 55
TaiI ACGT 1 cut(s) 217
TaqI TCGA 1 cut(s) 26
TasI AATT 5 cut(s) 28, 70, 249, 259, 311
TfiI GAWTC 3 cut(s) 92, 128, 181
Tru1I TTAA 1 cut(s) 302
Tru9I TTAA 1 cut(s) 302
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 1 cut(s) 63
TspGWI ACGGA 1 cut(s) 189
XapI RAATTY 2 cut(s) 28, 70
XceI RCATGY 1 cut(s) 12
XcmI CCANNNNNNNNNTGG 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.