Rh7CG116600
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
8975533 .. 8975832
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG116600.1

Sequence Viewer

Length: 300 bp
ATGATGAATTTCTTCCAGAGTAAAGGGAATTTGAATCCCTCAATTATTTCAAAGAATCCAAATCTTTTAAGGCTTAGCTTGGAGAAGAGCGTTATTCCTAGGTGTTCAGTTCTGCAACTTCTGTTGTCACATGACTTGATAAGGGAAGATATTAAGTATGTTGTTTATGTGCTCAGAATGACTGAGGAGACTTTCAAGAAGAAGATAATGAGCAAGTATAAAGAAGTGGTTCCAGATGTTATTAAGGCACACAAAGGCGAGATAGAATTTGAAGGGTTTTTGTTTCCTTTAAGTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

99

Amino Acids

11.53

Weight (kDa)

9.3

Isoelectric Point (pI)

35.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 7, 28, 266
AgsI TTSAA 4 cut(s) 34, 51, 196, 272
AluBI AGCT 1 cut(s) 78
AluI AGCT 1 cut(s) 78
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 1 cut(s) 182
ApoI RAATTY 3 cut(s) 7, 28, 266
Asp700I GAANNNNTTC 2 cut(s) 11, 228
AspA2I CCTAGG 1 cut(s) 98
AvrII CCTAGG 1 cut(s) 98
Bbv12I GWGCWC 1 cut(s) 174
BcoDI GTCTC 1 cut(s) 182
BfaI CTAG 1 cut(s) 99
BlnI CCTAGG 1 cut(s) 98
BlpI GCTNAGC 1 cut(s) 74
BmiI GGNNCC 1 cut(s) 231
Bpu1102I GCTNAGC 1 cut(s) 74
BsaJI CCNNGG 1 cut(s) 98
BseDI CCNNGG 1 cut(s) 98
BseMII CTCAG 2 cut(s) 174, 187
BseRI GAGGAG 1 cut(s) 200
BsiHKAI GWGCWC 1 cut(s) 174
BsmAI GTCTC 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 174
Bsp1720I GCTNAGC 1 cut(s) 74
BspCNI CTCAG 2 cut(s) 175, 186
BspLI GGNNCC 1 cut(s) 231
BspQI GCTCTTC 1 cut(s) 80
BssECI CCNNGG 1 cut(s) 98
BssT1I CCWWGG 1 cut(s) 98
Bst6I CTCTTC 1 cut(s) 80
BstDEI CTNAG 3 cut(s) 74, 173, 183
BstMAI GTCTC 1 cut(s) 182
CviAII CATG 1 cut(s) 131
CviJI RGCY 2 cut(s) 73, 78
CviKI_1 RGCY 2 cut(s) 73, 78
DdeI CTNAG 3 cut(s) 74, 173, 183
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
Eco130I CCWWGG 1 cut(s) 98
EcoT14I CCWWGG 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 98
FaeI CATG 1 cut(s) 134
FaiI YATR 5 cut(s) 132, 159, 168, 219, 298
FatI CATG 1 cut(s) 130
FspBI CTAG 1 cut(s) 99
Hin1II CATG 1 cut(s) 134
HinfI GANTC 2 cut(s) 34, 55
Hpy188I TCNGA 1 cut(s) 176
Hpy188III TCNNGA 3 cut(s) 16, 196, 233
HpyAV CCTTC 1 cut(s) 266
HpyCH4V TGCA 1 cut(s) 115
HpyF3I CTNAG 3 cut(s) 74, 173, 183
Hsp92II CATG 1 cut(s) 134
LguI GCTCTTC 1 cut(s) 80
LpnPI CCDG 2 cut(s) 29, 246
MaeI CTAG 1 cut(s) 99
MaeIII GTNAC 1 cut(s) 126
MboII GAAGA 5 cut(s) 4, 97, 158, 211, 214
MhlI GDGCHC 1 cut(s) 174
MluCI AATT 4 cut(s) 7, 28, 42, 266
MnlI CCTC 2 cut(s) 49, 178
MroXI GAANNNNTTC 2 cut(s) 11, 228
MseI TTAA 4 cut(s) 68, 153, 243, 290
NlaIII CATG 1 cut(s) 134
NlaIV GGNNCC 1 cut(s) 231
NmuCI GTSAC 1 cut(s) 126
PciSI GCTCTTC 1 cut(s) 80
PdmI GAANNNNTTC 2 cut(s) 11, 228
PfeI GAWTC 2 cut(s) 34, 55
PspN4I GGNNCC 1 cut(s) 231
SapI GCTCTTC 1 cut(s) 80
SaqAI TTAA 4 cut(s) 68, 153, 243, 290
SduI GDGCHC 1 cut(s) 174
SetI ASST 2 cut(s) 80, 104
SgeI CNNG 9 cut(s) 28, 91, 111, 143, 148, 208, 226, 245, 271
Sse9I AATT 4 cut(s) 7, 28, 42, 266
SspMI CTAG 1 cut(s) 99
StyI CCWWGG 1 cut(s) 98
TasI AATT 4 cut(s) 7, 28, 42, 266
TfiI GAWTC 2 cut(s) 34, 55
Tru1I TTAA 4 cut(s) 68, 153, 243, 290
Tru9I TTAA 4 cut(s) 68, 153, 243, 290
TseFI GTSAC 1 cut(s) 126
Tsp45I GTSAC 1 cut(s) 126
TspDTI ATGAA 1 cut(s) 20
XapI RAATTY 3 cut(s) 7, 28, 266
XmaJI CCTAGG 1 cut(s) 98
XmnI GAANNNNTTC 2 cut(s) 11, 228
XspI CTAG 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.