ATP-dependent Clp protease adapter protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68660 AT1G68660 |
| fragaria_vesca | FvH4_5g12540 |
| malus_domestica | MD13G1045100.v1.1 MD14G1223300.v1.1 MD16G1046400.v1.1 |
| prunus_persica | Prupe.1G306800_v2.0.a1 Prupe.1G306800_v2.0.a1 Prupe.1G306800_v2.0.a1 Prupe.5G218600_v2.0.a1 |
| pyrus_communis | pycom06g18970 |
| rosa_chinensis | RchiOBHm_Chr4g0435651 RchiOBHm_Chr7g0184811 |
| rosa_laevigata | RLG00000004952 RLG00000006570 RLG00000006573 |
| rosa_multiflora | Rmu_sc0000051.1_g000009 Rmu_ssc0000289.1_g000015 |
| rosa_roxburghii | Rroxscaffold_3G00269360 Rroxscaffold_5G00376870 |
| rosa_rugosa | Rorug06G0465100 |
| rosa_samantha | Rh4AG342800 Rh4BG351200 Rh4CG365800 Rh4DG345500 Rh7AG077800 Rh7BG069500 Rh7CG070300 Rh7DG069700 |
| rosa_wichuraiana | Rw4G029920 Rw7G005760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 15, 233, 456 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 41 |
| AflII | CTTAAG | 1 cut(s) | 208 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| AjnI | CCWGG | 4 cut(s) | 39, 128, 310, 366 |
| AluBI | AGCT | 1 cut(s) | 421 |
| AluI | AGCT | 1 cut(s) | 421 |
| Alw21I | GWGCWC | 1 cut(s) | 391 |
| AoxI | GGCC | 2 cut(s) | 364, 433 |
| ApeKI | GCWGC | 3 cut(s) | 5, 250, 418 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| AsuHPI | GGTGA | 1 cut(s) | 24 |
| AsuNHI | GCTAGC | 1 cut(s) | 458 |
| BanII | GRGCYC | 1 cut(s) | 456 |
| BbsI | GAAGAC | 1 cut(s) | 411 |
| Bbv12I | GWGCWC | 1 cut(s) | 391 |
| BbvI | GCAGC | 2 cut(s) | 237, 430 |
| BccI | CCATC | 2 cut(s) | 17, 458 |
| BceAI | ACGGC | 1 cut(s) | 448 |
| BciT130I | CCWGG | 4 cut(s) | 41, 130, 312, 368 |
| BfaI | CTAG | 3 cut(s) | 123, 186, 459 |
| BfrI | CTTAAG | 1 cut(s) | 208 |
| BisI | GCNGC | 4 cut(s) | 6, 233, 251, 419 |
| BlsI | GCNGC | 4 cut(s) | 7, 234, 252, 420 |
| Bme1390I | CCNGG | 4 cut(s) | 41, 130, 312, 368 |
| BmrFI | CCNGG | 4 cut(s) | 41, 130, 312, 368 |
| BmsI | GCATC | 4 cut(s) | 114, 128, 237, 388 |
| BmtI | GCTAGC | 1 cut(s) | 462 |
| BpiI | GAAGAC | 1 cut(s) | 411 |
| BpuEI | CTTGAG | 2 cut(s) | 79, 375 |
| BsaJI | CCNNGG | 2 cut(s) | 40, 310 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 41 |
| Bse3DI | GCAATG | 1 cut(s) | 327 |
| BseBI | CCWGG | 4 cut(s) | 41, 130, 312, 368 |
| BseDI | CCNNGG | 2 cut(s) | 40, 310 |
| BseGI | GGATG | 2 cut(s) | 403, 473 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseMI | GCAATG | 1 cut(s) | 327 |
| BseMII | CTCAG | 2 cut(s) | 189, 436 |
| BseXI | GCAGC | 2 cut(s) | 237, 430 |
| BsgI | GTGCAG | 1 cut(s) | 236 |
| Bsh1285I | CGRYCG | 1 cut(s) | 19 |
| BshFI | GGCC | 2 cut(s) | 366, 435 |
| BsiEI | CGRYCG | 1 cut(s) | 19 |
| BsiHKAI | GWGCWC | 1 cut(s) | 391 |
| BsiSI | CCGG | 1 cut(s) | 100 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BsnI | GGCC | 2 cut(s) | 366, 435 |
| Bsp1286I | GDGCHC | 2 cut(s) | 391, 456 |
| BspACI | CCGC | 3 cut(s) | 15, 233, 456 |
| BspANI | GGCC | 2 cut(s) | 366, 435 |
| BspCNI | CTCAG | 2 cut(s) | 190, 435 |
| BspOI | GCTAGC | 1 cut(s) | 462 |
| BspTI | CTTAAG | 1 cut(s) | 208 |
| BsrDI | GCAATG | 1 cut(s) | 327 |
| BssECI | CCNNGG | 2 cut(s) | 40, 310 |
| Bst2UI | CCWGG | 4 cut(s) | 41, 130, 312, 368 |
| Bst4CI | ACNGT | 2 cut(s) | 242, 322 |
| BstAFI | CTTAAG | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 3 cut(s) | 416, 456, 460 |
| BstDEI | CTNAG | 3 cut(s) | 198, 422, 440 |
| BstF5I | GGATG | 2 cut(s) | 403, 473 |
| BstMCI | CGRYCG | 1 cut(s) | 19 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 160 |
| BstNI | CCWGG | 4 cut(s) | 41, 130, 312, 368 |
| BstNSI | RCATGY | 1 cut(s) | 418 |
| BstSCI | CCNGG | 4 cut(s) | 39, 128, 310, 366 |
| BstV1I | GCAGC | 2 cut(s) | 237, 430 |
| BstV2I | GAAGAC | 1 cut(s) | 411 |
| BsuRI | GGCC | 2 cut(s) | 366, 435 |
| BtsCI | GGATG | 2 cut(s) | 403, 473 |
| BtsI | GCAGTG | 2 cut(s) | 339, 409 |
| BtsIMutI | CAGTG | 2 cut(s) | 339, 409 |
| Cac8I | GCNNGC | 3 cut(s) | 416, 456, 460 |
| CviAII | CATG | 1 cut(s) | 415 |
| CviJI | RGCY | 8 cut(s) | 5, 99, 133, 163, 366, 421, 435, 454 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 99, 133, 163, 366, 421, 435, 454 |
| DdeI | CTNAG | 3 cut(s) | 198, 422, 440 |
| Eco24I | GRGCYC | 1 cut(s) | 456 |
| EcoRII | CCWGG | 4 cut(s) | 39, 128, 310, 366 |
| EcoT38I | GRGCYC | 1 cut(s) | 456 |
| FaeI | CATG | 1 cut(s) | 418 |
| FaiI | YATR | 5 cut(s) | 84, 170, 282, 341, 416 |
| FatI | CATG | 1 cut(s) | 414 |
| FauI | CCCGC | 1 cut(s) | 463 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 233, 251, 419 |
| FokI | GGATG | 1 cut(s) | 410 |
| FriOI | GRGCYC | 1 cut(s) | 456 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 233, 251, 419 |
| FspBI | CTAG | 3 cut(s) | 123, 186, 459 |
| GluI | GCNGC | 4 cut(s) | 6, 233, 251, 419 |
| HaeIII | GGCC | 2 cut(s) | 366, 435 |
| HapII | CCGG | 1 cut(s) | 100 |
| Hin1II | CATG | 1 cut(s) | 418 |
| HincII | GTYRAC | 1 cut(s) | 325 |
| HindII | GTYRAC | 1 cut(s) | 325 |
| HinfI | GANTC | 3 cut(s) | 21, 45, 194 |
| HpaII | CCGG | 1 cut(s) | 100 |
| HphI | GGTGA | 1 cut(s) | 24 |
| Hpy166II | GTNNAC | 2 cut(s) | 325, 337 |
| Hpy188I | TCNGA | 3 cut(s) | 199, 297, 425 |
| Hpy188III | TCNNGA | 2 cut(s) | 109, 191 |
| Hpy8I | GTNNAC | 2 cut(s) | 325, 337 |
| HpyAV | CCTTC | 2 cut(s) | 295, 446 |
| HpyCH4III | ACNGT | 2 cut(s) | 242, 322 |
| HpyCH4V | TGCA | 7 cut(s) | 253, 289, 332, 346, 401, 414, 418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 160 |
| HpyF3I | CTNAG | 3 cut(s) | 198, 422, 440 |
| Hsp92II | CATG | 1 cut(s) | 418 |
| LmnI | GCTCC | 1 cut(s) | 102 |
| Lsp1109I | GCAGC | 2 cut(s) | 237, 430 |
| LweI | GCATC | 4 cut(s) | 114, 128, 237, 388 |
| MaeI | CTAG | 3 cut(s) | 123, 186, 459 |
| MaeIII | GTNAC | 1 cut(s) | 191 |
| MboII | GAAGA | 1 cut(s) | 416 |
| MhlI | GDGCHC | 2 cut(s) | 391, 456 |
| MluCI | AATT | 1 cut(s) | 378 |
| MlyI | GAGTC | 2 cut(s) | 30, 188 |
| MnlI | CCTC | 3 cut(s) | 267, 343, 419 |
| MseI | TTAA | 1 cut(s) | 209 |
| MslI | CAYNNNNRTG | 3 cut(s) | 110, 332, 360 |
| MspCI | CTTAAG | 1 cut(s) | 208 |
| MspI | CCGG | 1 cut(s) | 100 |
| MspR9I | CCNGG | 4 cut(s) | 41, 130, 312, 368 |
| MvaI | CCWGG | 4 cut(s) | 41, 130, 312, 368 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 160 |
| NheI | GCTAGC | 1 cut(s) | 458 |
| NlaIII | CATG | 1 cut(s) | 418 |
| NmuCI | GTSAC | 1 cut(s) | 191 |
| NspI | RCATGY | 1 cut(s) | 418 |
| PaeI | GCATGC | 1 cut(s) | 418 |
| PfeI | GAWTC | 1 cut(s) | 45 |
| PkrI | GCNGC | 4 cut(s) | 7, 234, 252, 420 |
| PleI | GAGTC | 2 cut(s) | 29, 188 |
| PpsI | GAGTC | 2 cut(s) | 29, 188 |
| Psp6I | CCWGG | 4 cut(s) | 39, 128, 310, 366 |
| PspGI | CCWGG | 4 cut(s) | 39, 128, 310, 366 |
| RseI | CAYNNNNRTG | 3 cut(s) | 110, 332, 360 |
| SaqAI | TTAA | 1 cut(s) | 209 |
| SatI | GCNGC | 4 cut(s) | 6, 233, 251, 419 |
| SchI | GAGTC | 2 cut(s) | 30, 188 |
| ScrFI | CCNGG | 4 cut(s) | 41, 130, 312, 368 |
| SduI | GDGCHC | 2 cut(s) | 391, 456 |
| SetI | ASST | 5 cut(s) | 37, 145, 187, 306, 423 |
| SfaNI | GCATC | 4 cut(s) | 114, 128, 237, 388 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 110, 332, 360 |
| SmlI | CTYRAG | 3 cut(s) | 94, 208, 390 |
| SmoI | CTYRAG | 3 cut(s) | 94, 208, 390 |
| SphI | GCATGC | 1 cut(s) | 418 |
| Sse9I | AATT | 1 cut(s) | 378 |
| SsiI | CCGC | 3 cut(s) | 15, 233, 456 |
| SspMI | CTAG | 3 cut(s) | 123, 186, 459 |
| StyD4I | CCNGG | 4 cut(s) | 39, 128, 310, 366 |
| TaaI | ACNGT | 2 cut(s) | 242, 322 |
| TaqI | TCGA | 1 cut(s) | 19 |
| TasI | AATT | 1 cut(s) | 378 |
| TauI | GCSGC | 1 cut(s) | 235 |
| TfiI | GAWTC | 1 cut(s) | 45 |
| Tru1I | TTAA | 1 cut(s) | 209 |
| Tru9I | TTAA | 1 cut(s) | 209 |
| TscAI | CASTG | 2 cut(s) | 339, 416 |
| TseFI | GTSAC | 1 cut(s) | 191 |
| TseI | GCWGC | 3 cut(s) | 5, 250, 418 |
| Tsp45I | GTSAC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 2 cut(s) | 71, 314 |
| TspRI | CASTG | 2 cut(s) | 339, 416 |
| Vha464I | CTTAAG | 1 cut(s) | 208 |
| XceI | RCATGY | 1 cut(s) | 418 |
| XspI | CTAG | 3 cut(s) | 123, 186, 459 |