Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006048

Physical Location & Seq

Genomic Coordinates Reverse (-)

7421806 .. 7423445

Gene Structure 1640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G104900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGGAGAAGTTTGCCACACTAATCTTGGTTTGCAGTTTCCTCATTGTCCTTGTTTTGTTGCTTTCATGCCAAGCAACATCTGACGAAGTTGAAGATGAGAGGGAGTTTAATTATGAAGATGACAGTGAGAAGGGGCCAGCTCGATGGGGAAAGATTCGCCAAGAATGGAGCATGTGTAACAAGGGATCGATGCAGTCTCCGATCGATCTGTTAGATGATAGAGTTGAAGTAGTGTCAGATTTGGGGAGACTTCAGGGTAGCTACAGGCCTCGTAATGCAACTCTTGAGAATAGGGGCCATGATATTATGTTGAAGTGGGAAGCTGATGCAGGATTTATACGAATAAATGGAACTCTGTATCAGCTCAAACAATGCCACTGGCACTCACCTTCTGAACACACCGTCAATGACAAGAGCTTTGATTTAGAGGTGCATCTGGTTCATCAGAGCCCAACTGGAAAGAACGCCGTGACTGGAATCCTGTATAAGATTGGAGAGCCCGATCCGTTTTTGACTTCGATAATGGATTATTTAGCAGACATCTCTGGAACCTGTGAAAAGCAGAAAGTGGTTGGTATGGTTGATCCAAAGCAAATAAAAGCAGGCAGTATAAAGTATTACAGATATATTGGCTCTCTTACGATTCCTCCTTGCACACAAGATGTTATCTGGACAATTGTTGAAAAGGTGAGGAGTGTCTCAAGTGAACAGGTCAAATTGCTCCGTGTAGCTGTTCATGATGGGTCAGACACTAATGCAAGACCAGTTCAACCGAGAAACAGGCGAGTCGTGCAACTTTATAAACCCACAGTAGAGGAAGAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0010033 GO:0010037 GO:0016020 GO:0042221 GO:0042493 GO:0050896 GO:0072347 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

276

Amino Acids

31.24

Weight (kDa)

5.7

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08080 AT2G28210 AT2G28210
fragaria_vesca	FvH4_3g31680 FvH4_3g31680 FvH4_3g31680 FvH4_3g31680
malus_domestica	MD03G1121900.v1.1 MD11G1140500.v1.1
prunus_persica	Prupe.6G104900_v2.0.a1
pyrus_communis	pycom11g11620
rosa_chinensis	RchiOBHm_Chr5g0056011 RchiOBHm_Chr5g0058391
rosa_laevigata	RLG00000035043 RLG00000035216
rosa_multiflora	Rmu_sc0000367.1_g000109
rosa_roxburghii	Rroxscaffold_1G00022170 Rroxscaffold_1G00024250
rosa_rugosa	Rorug05G0313500
rosa_samantha	Rh5AG368100 Rh5AG381000 Rh5BG378800 Rh5BG392600 Rh5CG416700 Rh5DG407800
rosa_wichuraiana	Rw5G034560 Rw5G035900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	801
AclWI	GGATC	3 cut(s)	193, 497, 578
AcuI	CTGAAG	1 cut(s)	236
AgsI	TTSAA	5 cut(s)	92, 227, 313, 683, 770
AluBI	AGCT	6 cut(s)	140, 261, 323, 364, 417, 731
AluI	AGCT	6 cut(s)	140, 261, 323, 364, 417, 731
Alw26I	GTCTC	3 cut(s)	201, 241, 703
AlwI	GGATC	3 cut(s)	193, 497, 578
AoxI	GGCC	3 cut(s)	134, 266, 295
ArsI	GACNNNNNNTTYG	2 cut(s)	401, 433
AspS9I	GGNCC	2 cut(s)	134, 295
AsuHPI	GGTGA	2 cut(s)	378, 700
BanII	GRGCYC	2 cut(s)	452, 501
BccI	CCATC	2 cut(s)	138, 734
BceAI	ACGGC	1 cut(s)	452
BcoDI	GTCTC	3 cut(s)	201, 241, 703
BfmI	CTRYAG	1 cut(s)	262
BmgT120I	GGNCC	2 cut(s)	134, 295
BmiI	GGNNCC	3 cut(s)	135, 296, 550
BmsI	GCATC	3 cut(s)	180, 316, 442
BpuEI	CTTGAG	2 cut(s)	305, 685
Bsa29I	ATCGAT	2 cut(s)	188, 204
BsaXI	ACNNNNNCTCC	4 cut(s)	160, 190, 631, 661
Bse1I	ACTGG	4 cut(s)	383, 460, 478, 764
BseCI	ATCGAT	2 cut(s)	188, 204
BseNI	ACTGG	4 cut(s)	383, 460, 478, 764
BseRI	GAGGAG	1 cut(s)	706
Bsh1285I	CGRYCG	1 cut(s)	204
BshFI	GGCC	3 cut(s)	136, 268, 297
BshVI	ATCGAT	2 cut(s)	188, 204
BsiEI	CGRYCG	1 cut(s)	204
BsmAI	GTCTC	3 cut(s)	201, 241, 703
BsnI	GGCC	3 cut(s)	136, 268, 297
Bsp1286I	GDGCHC	2 cut(s)	452, 501
Bsp143I	GATC	5 cut(s)	185, 201, 205, 502, 583
BspANI	GGCC	3 cut(s)	136, 268, 297
BspDI	ATCGAT	2 cut(s)	188, 204
BspHI	TCATGA	1 cut(s)	736
BspLI	GGNNCC	3 cut(s)	135, 296, 550
BspPI	GGATC	3 cut(s)	193, 497, 578
BsrI	ACTGG	4 cut(s)	383, 460, 478, 764
BssMI	GATC	5 cut(s)	185, 201, 205, 502, 583
Bst4CI	ACNGT	3 cut(s)	125, 403, 811
Bst6I	CTCTTC	1 cut(s)	813
BstC8I	GCNNGC	2 cut(s)	138, 604
BstKTI	GATC	5 cut(s)	188, 204, 208, 505, 586
BstMAI	GTCTC	3 cut(s)	201, 241, 703
BstMBI	GATC	5 cut(s)	185, 201, 205, 502, 583
BstMCI	CGRYCG	1 cut(s)	204
BstMWI	GCNNNNNNNGC	1 cut(s)	790
BstNSI	RCATGY	1 cut(s)	175
BstSFI	CTRYAG	1 cut(s)	262
BstXI	CCANNNNNNTGG	1 cut(s)	144
Bsu15I	ATCGAT	2 cut(s)	188, 204
BsuRI	GGCC	3 cut(s)	136, 268, 297
BsuTUI	ATCGAT	2 cut(s)	188, 204
BtsIMutI	CAGTG	2 cut(s)	130, 376
Cac8I	GCNNGC	2 cut(s)	138, 604
CciI	TCATGA	1 cut(s)	736
Cfr13I	GGNCC	2 cut(s)	134, 295
ClaI	ATCGAT	2 cut(s)	188, 204
CviAII	CATG	4 cut(s)	66, 172, 299, 737
DpnI	GATC	5 cut(s)	187, 203, 207, 504, 585
DpnII	GATC	5 cut(s)	185, 201, 205, 502, 583
Eam1104I	CTCTTC	1 cut(s)	813
EarI	CTCTTC	1 cut(s)	813
Eco147I	AGGCCT	1 cut(s)	268
Eco24I	GRGCYC	2 cut(s)	452, 501
Eco57I	CTGAAG	1 cut(s)	236
EcoT38I	GRGCYC	2 cut(s)	452, 501
FaeI	CATG	4 cut(s)	69, 175, 302, 740
FatI	CATG	4 cut(s)	65, 171, 298, 736
FriOI	GRGCYC	2 cut(s)	452, 501
HaeIII	GGCC	3 cut(s)	136, 268, 297
Hin1II	CATG	4 cut(s)	69, 175, 302, 740
HinfI	GANTC	4 cut(s)	154, 477, 643, 786
HphI	GGTGA	2 cut(s)	378, 700
Hpy166II	GTNNAC	1 cut(s)	707
Hpy188I	TCNGA	6 cut(s)	82, 201, 238, 394, 447, 748
Hpy188III	TCNNGA	4 cut(s)	284, 546, 670, 737
Hpy8I	GTNNAC	1 cut(s)	707
HpyAV	CCTTC	2 cut(s)	124, 399
HpyCH4III	ACNGT	3 cut(s)	125, 403, 811
HpyCH4V	TGCA	8 cut(s)	33, 193, 278, 329, 433, 654, 758, 793
HpyF10VI	GCNNNNNNNGC	1 cut(s)	790
Hsp92II	CATG	4 cut(s)	69, 175, 302, 740
Kzo9I	GATC	5 cut(s)	185, 201, 205, 502, 583
LmnI	GCTCC	2 cut(s)	168, 726
LweI	GCATC	3 cut(s)	180, 316, 442
MaeIII	GTNAC	2 cut(s)	176, 469
MalI	GATC	5 cut(s)	187, 203, 207, 504, 585
MboI	GATC	5 cut(s)	185, 201, 205, 502, 583
MboII	GAAGA	2 cut(s)	104, 128
MfeI	CAATTG	1 cut(s)	675
MhlI	GDGCHC	2 cut(s)	452, 501
MluCI	AATT	4 cut(s)	109, 675, 716, 823
MlyI	GAGTC	1 cut(s)	795
MnlI	CCTC	7 cut(s)	50, 93, 279, 421, 657, 684, 808
MseI	TTAA	1 cut(s)	108
MunI	CAATTG	1 cut(s)	675
MwoI	GCNNNNNNNGC	1 cut(s)	790
NdeII	GATC	5 cut(s)	185, 201, 205, 502, 583
NlaIII	CATG	4 cut(s)	69, 175, 302, 740
NlaIV	GGNNCC	3 cut(s)	135, 296, 550
NmuCI	GTSAC	1 cut(s)	469
NspI	RCATGY	1 cut(s)	175
PagI	TCATGA	1 cut(s)	736
PceI	AGGCCT	1 cut(s)	268
PfeI	GAWTC	3 cut(s)	154, 477, 643
Ple19I	CGATCG	1 cut(s)	204
PleI	GAGTC	1 cut(s)	794
PpsI	GAGTC	1 cut(s)	794
PsiI	TTATAA	1 cut(s)	801
PspN4I	GGNNCC	3 cut(s)	135, 296, 550
PspPI	GGNCC	2 cut(s)	134, 295
PvuI	CGATCG	1 cut(s)	204
SaqAI	TTAA	1 cut(s)	108
Sau3AI	GATC	5 cut(s)	185, 201, 205, 502, 583
Sau96I	GGNCC	2 cut(s)	134, 295
SchI	GAGTC	1 cut(s)	795
SduI	GDGCHC	2 cut(s)	452, 501
SfaNI	GCATC	3 cut(s)	180, 316, 442
SfcI	CTRYAG	1 cut(s)	262
SmlI	CTYRAG	2 cut(s)	284, 700
SmoI	CTYRAG	2 cut(s)	284, 700
Sse9I	AATT	4 cut(s)	109, 675, 716, 823
SseBI	AGGCCT	1 cut(s)	268
StuI	AGGCCT	1 cut(s)	268
TaaI	ACNGT	3 cut(s)	125, 403, 811
TaqI	TCGA	4 cut(s)	142, 188, 204, 518
TasI	AATT	4 cut(s)	109, 675, 716, 823
TfiI	GAWTC	3 cut(s)	154, 477, 643
Tru1I	TTAA	1 cut(s)	108
Tru9I	TTAA	1 cut(s)	108
TscAI	CASTG	2 cut(s)	130, 383
TseFI	GTSAC	1 cut(s)	469
Tsp45I	GTSAC	1 cut(s)	469
TspDTI	ATGAA	4 cut(s)	54, 129, 431, 725
TspGWI	ACGGA	2 cut(s)	495, 713
TspRI	CASTG	2 cut(s)	130, 383
XceI	RCATGY	1 cut(s)	175
XcmI	CCANNNNNNNNNTGG	1 cut(s)	22

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.