Prupe.6G205300_v2.0.a1

Cysteine-rich antifungal protein 2, defensin-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
21342161 .. 21342835
675 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G205300.1

Sequence Viewer

Length: 249 bp
ATGGCTAAGTTTACAATCCCTTGTTTCTTCCTCATTTTGGTGCTCTTGTCAACCACCAATGTTTGGAAGATTACAACTGTTGAAGGGTCTAAGTGTTGTACTGATCATTCTGAACTTGGAAAGTGTGTCCCTGGTGCGGATGACAACCCAAACGGTGGAAAATGCTGGACATTTTGCACTTCAGATTGTGAGAAAGGAGGCATCTGCAAACTATTTGGCGATCATCATCATTGCCATTGCTTATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

8.97

Weight (kDa)

6.47

Isoelectric Point (pI)

23.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 63, 155
AciI CCGC 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 165
AfaI GTAC 1 cut(s) 100
AfiI CCNNNNNNNGG 4 cut(s) 37, 63, 136, 155
AgsI TTSAA 1 cut(s) 83
AjnI CCWGG 1 cut(s) 130
Alw21I GWGCWC 1 cut(s) 45
Bbv12I GWGCWC 1 cut(s) 45
BciT130I CCWGG 1 cut(s) 132
BclI TGATCA 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 132
BmrFI CCNGG 1 cut(s) 132
BmsI GCATC 1 cut(s) 210
BsaBI GATNNNNATC 1 cut(s) 225
BsaJI CCNNGG 1 cut(s) 130
Bsc4I CCNNNNNNNGG 4 cut(s) 37, 63, 136, 155
Bse3DI GCAATG 2 cut(s) 229, 235
Bse8I GATNNNNATC 1 cut(s) 225
BseBI CCWGG 1 cut(s) 132
BseDI CCNNGG 1 cut(s) 130
BseGI GGATG 1 cut(s) 145
BseJI GATNNNNATC 1 cut(s) 225
BseLI CCNNNNNNNGG 4 cut(s) 37, 63, 136, 155
BseMI GCAATG 2 cut(s) 229, 235
BsiHKAI GWGCWC 1 cut(s) 45
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 4 cut(s) 37, 63, 136, 155
BsmFI GGGAC 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 45
Bsp143I GATC 2 cut(s) 103, 220
BspACI CCGC 1 cut(s) 137
BsrDI GCAATG 2 cut(s) 229, 235
BssECI CCNNGG 1 cut(s) 130
BssMI GATC 2 cut(s) 103, 220
Bst2UI CCWGG 1 cut(s) 132
Bst4CI ACNGT 2 cut(s) 79, 155
BstDEI CTNAG 2 cut(s) 6, 90
BstF5I GGATG 1 cut(s) 145
BstKTI GATC 2 cut(s) 106, 223
BstMBI GATC 2 cut(s) 103, 220
BstNI CCWGG 1 cut(s) 132
BstSCI CCNGG 1 cut(s) 130
BtsCI GGATG 1 cut(s) 145
Csp6I GTAC 1 cut(s) 99
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
CviQI GTAC 1 cut(s) 99
DdeI CTNAG 2 cut(s) 6, 90
DpnI GATC 2 cut(s) 105, 222
DpnII GATC 2 cut(s) 103, 220
Eco57I CTGAAG 1 cut(s) 165
EcoRII CCWGG 1 cut(s) 130
FaiI YATR 1 cut(s) 244
FaqI GGGAC 1 cut(s) 113
FbaI TGATCA 1 cut(s) 103
FokI GGATG 1 cut(s) 152
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
Hpy166II GTNNAC 2 cut(s) 12, 51
Hpy188I TCNGA 2 cut(s) 112, 184
Hpy8I GTNNAC 2 cut(s) 12, 51
HpyAV CCTTC 1 cut(s) 77
HpyCH4III ACNGT 2 cut(s) 79, 155
HpyCH4V TGCA 2 cut(s) 177, 207
HpyF3I CTNAG 2 cut(s) 6, 90
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 2 cut(s) 103, 220
LpnPI CCDG 3 cut(s) 117, 144, 151
LweI GCATC 1 cut(s) 210
MalI GATC 2 cut(s) 105, 222
MboI GATC 2 cut(s) 103, 220
MboII GAAGA 2 cut(s) 19, 79
MhlI GDGCHC 1 cut(s) 45
MnlI CCTC 2 cut(s) 41, 191
MslI CAYNNNNRTG 1 cut(s) 38
MspR9I CCNGG 1 cut(s) 132
MvaI CCWGG 1 cut(s) 132
NdeII GATC 2 cut(s) 103, 220
PflMI CCANNNNNTGG 2 cut(s) 63, 155
Psp6I CCWGG 1 cut(s) 130
PspGI CCWGG 1 cut(s) 130
RsaI GTAC 1 cut(s) 100
RsaNI GTAC 1 cut(s) 99
RseI CAYNNNNRTG 1 cut(s) 38
Sau3AI GATC 2 cut(s) 103, 220
ScrFI CCNGG 1 cut(s) 132
SduI GDGCHC 1 cut(s) 45
SfaNI GCATC 1 cut(s) 210
SgeI CNNG 6 cut(s) 33, 58, 128, 143, 144, 178
SmiMI CAYNNNNRTG 1 cut(s) 38
SsiI CCGC 1 cut(s) 137
StyD4I CCNGG 1 cut(s) 130
TaaI ACNGT 2 cut(s) 79, 155
TatI WGTACW 1 cut(s) 98
Van91I CCANNNNNTGG 2 cut(s) 63, 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.